RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	FA2H	Q7L5A8	372 aa		7.79	□□□□□ -1.16
CDK5RAP3-222	ENST00000581708	SMCO4	Q9NRQ5	59 aa		7.79	□□□□□ -1.16
CDK5RAP3-222	ENST00000581708	SVBP	Q8N300	66 aa		7.78	□□□□□ -1.16
CDK5RAP3-222	ENST00000581708	CDKN2A-AS1	Q9UH64	79 aa		7.78	□□□□□ -1.16
CDK5RAP3-222	ENST00000581708	IGLV5-45	A0A087WSX0	123 aa		7.77	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	SNAPIN	O95295	136 aa		7.77	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	C2orf82	Q6UX34	121 aa		7.77	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	CST9L	Q9H4G1	147 aa		7.77	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	TOMM7	Q9P0U1	55 aa		7.77	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	PSORS1C2	Q9UIG4	136 aa		7.77	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	HMCN2	Q8NDA2	5059 aa		7.77	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708		F8VRH5	84 aa		7.76	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	PMVK	Q15126	192 aa		7.76	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	GAGE2E	Q4V326	116 aa		7.76	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	PDZD11	Q5EBL8	140 aa		7.76	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	PHF5A	Q7RTV0	110 aa	Known RBP	7.76	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	LINC00469	Q8N7U9	141 aa		7.76	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	GAGE2D	Q9UEU5	116 aa		7.76	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	APOC3	P02656	99 aa		7.75	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	TRAPPC1	Q9Y5R8	145 aa		7.75	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	SMIM1	B2RUZ4	78 aa		7.74	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	LINC00614	P0C842	121 aa		7.74	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	RAB5B	P61020	215 aa		7.74	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	PLA2G2D	Q9UNK4	145 aa		7.74	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	FAM168B	A1KXE4	195 aa		7.73	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708		H3BRM9	83 aa		7.73	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	C1orf137	Q5JT78	98 aa		7.73	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.73	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	C18orf32	Q8TCD1	76 aa		7.73	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708		M0QXV9	152 aa		7.72	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	IGLV7-43	P04211	117 aa		7.72	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	KRTAP10-8	P60410	259 aa		7.72	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	C9orf129	Q5T035	196 aa	Known RBP	7.72	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	COX7B2	Q8TF08	81 aa		7.72	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	DIRC1	Q969H9	104 aa		7.72	□□□□□ -1.17
CDK5RAP3-222	ENST00000581708	ATP5L	O75964	103 aa		7.71	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	HBD	P02042	147 aa		7.71	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	LBH	Q53QV2	105 aa	Predicted RBP	7.71	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	TP73-AS1	Q9UF72	201 aa		7.71	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708		A0A096LNJ9	63 aa		7.7	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	IGLC3	P0DOY3	106 aa		7.7	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	UBE2B	P63146	152 aa		7.7	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	KRTAP7-1	Q8IUC3	87 aa		7.7	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	URB1-AS1	Q96HZ7	61 aa		7.69	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	IGLV5-39	A0A0G2JS06	123 aa		7.68	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	SFTA2	Q6UW10	78 aa		7.68	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	YPEL4	Q96NS1	127 aa		7.68	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708		H0Y9J4	135 aa		7.67	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	NUPR1	O60356	82 aa		7.67	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	SPINK8	P0C7L1	97 aa		7.67	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	CHCHD1	Q96BP2	118 aa	Known RBP	7.67	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	C22orf24	Q9Y442	160 aa		7.67	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	TNXB	P22105	4242 aa		7.66	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	NDUFA6	P56556	154 aa		7.66	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	KRTAP11-1	Q8IUC1	163 aa		7.66	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	XAGE1A	Q9HD64	81 aa		7.66	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	ZNF22	P17026	224 aa	Predicted RBP	7.65	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	COX17	Q14061	63 aa		7.65	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	MRPL55	Q7Z7F7	128 aa	Known RBP	7.65	□□□□□ -1.18
CDK5RAP3-222	ENST00000581708	IGLV5-37	A0A075B6J1	123 aa		7.64	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	BAGE3	Q86Y29	109 aa		7.64	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	IGLV1-50	A0A075B6I6	118 aa		7.63	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	TRAV12-1	A0A0B4J245	112 aa		7.63	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	PMCHL1	Q16048	86 aa		7.63	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	ZNF861P	O60384	105 aa		7.62	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	C11orf86	A6NJI1	115 aa		7.61	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	TMEM170B	Q5T4T1	132 aa		7.61	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	UBR4	Q5T4S7	5183 aa		7.61	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	RPL13A	P40429	203 aa	Known RBP	7.6	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	NKAPP1	Q8N9T2	125 aa		7.6	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	IFI27L1	Q96BM0	104 aa		7.6	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	ERG28	Q9UKR5	140 aa		7.6	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	CHTOP	Q9Y3Y2	248 aa	Known RBP	7.6	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	BCE1	O60756	84 aa		7.59	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	HSBP1	O75506	76 aa		7.59	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	RPL28	P46779	137 aa	Known RBP	7.59	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	LINC00167	Q96N53	147 aa		7.59	□□□□□ -1.19
CDK5RAP3-222	ENST00000581708	KRTAP1-4	P0C5Y4	121 aa		7.58	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	PFN2	P35080	140 aa		7.58	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	RPL24	P83731	157 aa	Known RBP	7.58	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	CBLN2	Q8IUK8	224 aa		7.58	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	ZNF625	Q96I27	306 aa	Predicted RBP	7.58	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	PRR26	Q8N8Z3	221 aa		7.57	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	TMEM223	A0PJW6	202 aa		7.56	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	TRGC2	P03986	189 aa		7.56	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	SND1-IT1	Q9HBX3	110 aa		7.56	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	LINC00587	B1AMM8	73 aa		7.55	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	RPL37AP8	A6NKH3	93 aa		7.54	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	VPREB1	P12018	145 aa		7.54	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	HERV-K104	P63124	156 aa		7.54	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	GAGE10	A6NGK3	116 aa		7.53	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	LEPROTL1	O95214	131 aa		7.53	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	FAM19A2	Q8N3H0	131 aa		7.53	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	HSPB8	Q9UJY1	196 aa		7.53	□□□□□ -1.2
CDK5RAP3-222	ENST00000581708	LINC00158	P58513	81 aa		7.52	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	KRTAP13-1	Q8IUC0	172 aa		7.52	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	COLCA2	A8K830	154 aa		7.51	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	SERF1A	O75920	110 aa		7.51	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	PLN	P26678	52 aa		7.51	□□□□□ -1.21
CDK5RAP3-222	ENST00000581708	UBE2A	P49459	152 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms