RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 C2orf82Q6UX34 121 aa15.55■□□□□ 0.08
CDC42EP4-205ENST00000580315 LINC00469Q8N7U9 141 aa15.55■□□□□ 0.08
CDC42EP4-205ENST00000580315 CST9LQ9H4G1 147 aa15.55■□□□□ 0.08
CDC42EP4-205ENST00000580315 TINCRA0A1B0GVN0 87 aa15.54■□□□□ 0.08
CDC42EP4-205ENST00000580315 MT1HL1P0DM35 61 aa15.54■□□□□ 0.08
CDC42EP4-205ENST00000580315 CKS1BP61024 79 aa15.54■□□□□ 0.08
CDC42EP4-205ENST00000580315 Q8IZM0 81 aa15.54■□□□□ 0.08
CDC42EP4-205ENST00000580315 YPEL4Q96NS1 127 aa15.54■□□□□ 0.08
CDC42EP4-205ENST00000580315 C9orf116Q5BN46 136 aaPredicted RBP15.53■□□□□ 0.08
CDC42EP4-205ENST00000580315 A0A1W2PNN7 141 aa15.52■□□□□ 0.08
CDC42EP4-205ENST00000580315 HBDP02042 147 aa15.52■□□□□ 0.08
CDC42EP4-205ENST00000580315 URB1-AS1Q96HZ7 61 aa15.52■□□□□ 0.08
CDC42EP4-205ENST00000580315 PRR3P79522 188 aaKnown RBP15.51■□□□□ 0.07
CDC42EP4-205ENST00000580315 Q6ZRP5 223 aa15.51■□□□□ 0.07
CDC42EP4-205ENST00000580315 A0A096LNJ9 63 aa15.49■□□□□ 0.07
CDC42EP4-205ENST00000580315 GAGE2EQ4V326 116 aa15.49■□□□□ 0.07
CDC42EP4-205ENST00000580315 CBLN2Q8IUK8 224 aa15.49■□□□□ 0.07
CDC42EP4-205ENST00000580315 SLC7A5P1Q8MH63 180 aa15.49■□□□□ 0.07
CDC42EP4-205ENST00000580315 GAGE2DQ9UEU5 116 aa15.49■□□□□ 0.07
CDC42EP4-205ENST00000580315 IGLV5-45A0A087WSX0 123 aa15.48■□□□□ 0.07
CDC42EP4-205ENST00000580315 NDUFC2-KCTD14E9PQ53 114 aa15.48■□□□□ 0.07
CDC42EP4-205ENST00000580315 NDUFA6P56556 154 aa15.47■□□□□ 0.07
CDC42EP4-205ENST00000580315 PDZD11Q5EBL8 140 aa15.47■□□□□ 0.07
CDC42EP4-205ENST00000580315 SMIM1B2RUZ4 78 aa15.46■□□□□ 0.07
CDC42EP4-205ENST00000580315 CXCL5P42830 114 aa15.46■□□□□ 0.07
CDC42EP4-205ENST00000580315 PMCHL1Q16048 86 aa15.46■□□□□ 0.07
CDC42EP4-205ENST00000580315 H3BRM9 83 aa15.45■□□□□ 0.06
CDC42EP4-205ENST00000580315 ATP5LO75964 103 aa15.45■□□□□ 0.06
CDC42EP4-205ENST00000580315 F8VRH5 84 aa15.44■□□□□ 0.06
CDC42EP4-205ENST00000580315 COX7B2Q8TF08 81 aa15.43■□□□□ 0.06
CDC42EP4-205ENST00000580315 CHCHD1Q96BP2 118 aaKnown RBP15.43■□□□□ 0.06
CDC42EP4-205ENST00000580315 SPINK8P0C7L1 97 aa15.42■□□□□ 0.06
CDC42EP4-205ENST00000580315 IGLC3P0DOY3 106 aa15.41■□□□□ 0.06
CDC42EP4-205ENST00000580315 PHF5AQ7RTV0 110 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-205ENST00000580315 FAM168BA1KXE4 195 aa15.4■□□□□ 0.06
CDC42EP4-205ENST00000580315 FAM19A5Q7Z5A7 132 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP4-205ENST00000580315 RNF213Q63HN8 5207 aa15.39■□□□□ 0.05
CDC42EP4-205ENST00000580315 BAGE3Q86Y29 109 aa15.38■□□□□ 0.05
CDC42EP4-205ENST00000580315 LRP2P98164 4655 aa15.38■□□□□ 0.05
CDC42EP4-205ENST00000580315 TRGC2P03986 189 aa15.36■□□□□ 0.05
CDC42EP4-205ENST00000580315 C9orf129Q5T035 196 aaKnown RBP15.36■□□□□ 0.05
CDC42EP4-205ENST00000580315 SPINK6Q6UWN8 80 aa15.36■□□□□ 0.05
CDC42EP4-205ENST00000580315 PSORS1C2Q9UIG4 136 aa15.36■□□□□ 0.05
CDC42EP4-205ENST00000580315 M0QXV9 152 aa15.34■□□□□ 0.05
CDC42EP4-205ENST00000580315 HSBP1O75506 76 aa15.34■□□□□ 0.05
CDC42EP4-205ENST00000580315 ZNF22P17026 224 aaPredicted RBP15.34■□□□□ 0.05
CDC42EP4-205ENST00000580315 C1orf137Q5JT78 98 aa15.32■□□□□ 0.04
CDC42EP4-205ENST00000580315 CHTOPQ9Y3Y2 248 aaKnown RBP15.32■□□□□ 0.04
CDC42EP4-205ENST00000580315 IGLV5-39A0A0G2JS06 123 aa15.31■□□□□ 0.04
CDC42EP4-205ENST00000580315 IFI27L1Q96BM0 104 aa15.31■□□□□ 0.04
CDC42EP4-205ENST00000580315 XAGE1AQ9HD64 81 aa15.31■□□□□ 0.04
CDC42EP4-205ENST00000580315 C11orf86A6NJI1 115 aa15.3■□□□□ 0.04
CDC42EP4-205ENST00000580315 UBE2BP63146 152 aa15.3■□□□□ 0.04
CDC42EP4-205ENST00000580315 SRSF9Q13242 221 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDC42EP4-205ENST00000580315 TMEM170BQ5T4T1 132 aa15.3■□□□□ 0.04
CDC42EP4-205ENST00000580315 KRTAP7-1Q8IUC3 87 aa15.3■□□□□ 0.04
CDC42EP4-205ENST00000580315 TNXBP22105 4242 aa15.3■□□□□ 0.04
CDC42EP4-205ENST00000580315 TRAV12-1A0A0B4J245 112 aa15.29■□□□□ 0.04
CDC42EP4-205ENST00000580315 REG3GQ6UW15 175 aa15.29■□□□□ 0.04
CDC42EP4-205ENST00000580315 COLCA2A8K830 154 aa15.27■□□□□ 0.04
CDC42EP4-205ENST00000580315 FAM19A2Q8N3H0 131 aa15.27■□□□□ 0.04
CDC42EP4-205ENST00000580315 LINC01600Q96MT4 127 aa15.25■□□□□ 0.03
CDC42EP4-205ENST00000580315 LBHQ53QV2 105 aaPredicted RBP15.24■□□□□ 0.03
CDC42EP4-205ENST00000580315 C22orf24Q9Y442 160 aa15.24■□□□□ 0.03
CDC42EP4-205ENST00000580315 SERF1AO75920 110 aa15.23■□□□□ 0.03
CDC42EP4-205ENST00000580315 SFTA2Q6UW10 78 aa15.23■□□□□ 0.03
CDC42EP4-205ENST00000580315 IGLV7-43P04211 117 aa15.22■□□□□ 0.03
CDC42EP4-205ENST00000580315 ODF1Q14990 250 aa15.22■□□□□ 0.03
CDC42EP4-205ENST00000580315 KRTAP11-1Q8IUC1 163 aa15.22■□□□□ 0.03
CDC42EP4-205ENST00000580315 LEPROTL1O95214 131 aa15.21■□□□□ 0.03
CDC42EP4-205ENST00000580315 TP73-AS1Q9UF72 201 aa15.2■□□□□ 0.02
CDC42EP4-205ENST00000580315 PFN2P35080 140 aa15.19■□□□□ 0.02
CDC42EP4-205ENST00000580315 LINC00310P59036 64 aa15.18■□□□□ 0.02
CDC42EP4-205ENST00000580315 ERG28Q9UKR5 140 aa15.18■□□□□ 0.02
CDC42EP4-205ENST00000580315 TMEM223A0PJW6 202 aa15.17■□□□□ 0.02
CDC42EP4-205ENST00000580315 H0Y8G0 127 aa15.17■□□□□ 0.02
CDC42EP4-205ENST00000580315 COX17Q14061 63 aa15.17■□□□□ 0.02
CDC42EP4-205ENST00000580315 MRPL55Q7Z7F7 128 aaKnown RBP15.17■□□□□ 0.02
CDC42EP4-205ENST00000580315 DIRC1Q969H9 104 aa15.17■□□□□ 0.02
CDC42EP4-205ENST00000580315 HSPB8Q9UJY1 196 aa15.16■□□□□ 0.02
CDC42EP4-205ENST00000580315 ZNF625Q96I27 306 aaPredicted RBP15.15■□□□□ 0.02
CDC42EP4-205ENST00000580315 NUPR1O60356 82 aa15.13■□□□□ 0.01
CDC42EP4-205ENST00000580315 SCO1O75880 301 aa15.13■□□□□ 0.01
CDC42EP4-205ENST00000580315 NKAPP1Q8N9T2 125 aa15.13■□□□□ 0.01
CDC42EP4-205ENST00000580315 IGLV5-37A0A075B6J1 123 aa15.11■□□□□ 0.01
CDC42EP4-205ENST00000580315 FABP4P15090 132 aa15.11■□□□□ 0.01
CDC42EP4-205ENST00000580315 KRTAP10-8P60410 259 aa15.11■□□□□ 0.01
CDC42EP4-205ENST00000580315 H0Y9J4 135 aa15.1■□□□□ 0.01
CDC42EP4-205ENST00000580315 SND1-IT1Q9HBX3 110 aa15.1■□□□□ 0.01
CDC42EP4-205ENST00000580315 LINC00167Q96N53 147 aa15.09■□□□□ 0.01
CDC42EP4-205ENST00000580315 PLNP26678 52 aa15.08■□□□□ 0
CDC42EP4-205ENST00000580315 GAGE10A6NGK3 116 aa15.07■□□□□ 0
CDC42EP4-205ENST00000580315 LINC00158P58513 81 aa15.07■□□□□ 0
CDC42EP4-205ENST00000580315 RPL37AP8A6NKH3 93 aa15.06■□□□□ 0
CDC42EP4-205ENST00000580315 RPL24P83731 157 aaKnown RBP15.06■□□□□ 0
CDC42EP4-205ENST00000580315 HIST1H2BKO60814 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST1H2BJP06899 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST1H2BOP23527 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST1H2BBP33778 126 aa15.05■□□□□ -0
CDC42EP4-205ENST00000580315 HIST1H2BDP58876 126 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms