RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 SPACA4Q8TDM5 124 aa2.41□□□□□ -2.02
NUP85-209ENST00000578987 TIMM21Q9BVV7 248 aa2.41□□□□□ -2.02
NUP85-209ENST00000578987 MAP1LC3CQ9BXW4 147 aa2.41□□□□□ -2.02
NUP85-209ENST00000578987 CDC42SE2Q9NRR3 84 aa2.41□□□□□ -2.02
NUP85-209ENST00000578987 PLAC8Q9NZF1 115 aa2.41□□□□□ -2.02
NUP85-209ENST00000578987 PYGO1Q9Y3Y4 419 aa2.41□□□□□ -2.02
NUP85-209ENST00000578987 A0A096LNI7 61 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.4□□□□□ -2.03
NUP85-209ENST00000578987 HSBP1O75506 76 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 TSPAN13O95857 204 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 KRTAP10-8P60410 259 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 MRPS36P82909 103 aaKnown RBP2.4□□□□□ -2.03
NUP85-209ENST00000578987 SRSF9Q13242 221 aaKnown RBP eCLIP2.4□□□□□ -2.03
NUP85-209ENST00000578987 AMMECR1LQ6DCA0 310 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 ZNF664Q8N3J9 261 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 C18orf32Q8TCD1 76 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 CHCHD10Q8WYQ3 142 aaPredicted RBP2.4□□□□□ -2.03
NUP85-209ENST00000578987 TOMM6Q96B49 74 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 CHCHD1Q96BP2 118 aaKnown RBP2.4□□□□□ -2.03
NUP85-209ENST00000578987 TMEM101Q96IK0 257 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 LINC01600Q96MT4 127 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 SPANXA1Q9NS26 97 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 CYSLTR1Q9Y271 337 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 UBE2D4Q9Y2X8 147 aa2.4□□□□□ -2.03
NUP85-209ENST00000578987 IGIPA6NJ69 53 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 C1orf196B1AJZ1 125 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 ATP5LO75964 103 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 PRR3P79522 188 aaKnown RBP2.39□□□□□ -2.03
NUP85-209ENST00000578987 FOXI1Q12951 378 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 C2orf66Q6UXQ4 117 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 FA2HQ7L5A8 372 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 BAGE3Q86Y29 109 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 OR5A1Q8NGJ0 315 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 C7orf33Q8WU49 177 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 URB1-AS1Q96HZ7 61 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 TMEM141Q96I45 108 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 TIMM17AQ99595 171 aa2.39□□□□□ -2.03
NUP85-209ENST00000578987 A0A087WZ39 114 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 A0A0J9YXV3 536 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 LINC00959A0A1B0GUT2 108 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 A0A1W2PNN7 141 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BKO60814 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BJP06899 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BOP23527 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BBP33778 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 XCL1P47992 114 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BDP58876 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BCP62807 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 RPL39P62891 51 aaKnown RBP2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST2H2BEQ16778 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 RNASE13Q5GAN3 156 aaKnown RBP2.38□□□□□ -2.03
NUP85-209ENST00000578987 COA6Q5JTJ3 125 aaKnown RBP2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.38□□□□□ -2.03
NUP85-209ENST00000578987 Q6ZVQ6 151 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BHQ93079 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 FAM104AQ969W3 186 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 SCGB3A1Q96QR1 104 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 AMELXQ99217 191 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BNQ99877 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 HIST1H2BMQ99879 126 aa2.38□□□□□ -2.03
NUP85-209ENST00000578987 IGLV4-69A0A075B6H9 119 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 IGLV4-3A0A075B6K6 122 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 A0A096LNJ9 63 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 HBDP02042 147 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 SEC11AP67812 179 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 SS18Q15532 418 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 PDZD11Q5EBL8 140 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 SPINK6Q6UWN8 80 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 Q6ZN92 141 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 TEX43Q6ZNM6 134 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 FAM19A3Q7Z5A8 133 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 BOD1L2Q8IYS8 172 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 PACRGQ96M98 296 aaPredicted RBP2.37□□□□□ -2.03
NUP85-209ENST00000578987 OPRPNQ99935 248 aaPredicted RBP2.37□□□□□ -2.03
NUP85-209ENST00000578987 CST9LQ9H4G1 147 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 V9GYY9 64 aa2.37□□□□□ -2.03
NUP85-209ENST00000578987 FAT3Q8TDW7 4589 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 GVQW2A0A096LPI5 108 aaPredicted RBP2.36□□□□□ -2.03
NUP85-209ENST00000578987 TRAV13-1A0A0B4J241 112 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 IGHV3OR16-9A0A0B4J2B5 98 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 IGHV1-58A0A0C4DH39 117 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 LOC107984640A0A0U1RRK4 108 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 NUPR1O60356 82 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 SERF1AO75920 110 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 LEPROTL1O95214 131 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 UBE2D1P51668 147 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 LINC00310P59036 64 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 RPL24P83731 157 aaKnown RBP2.36□□□□□ -2.03
NUP85-209ENST00000578987 SYCNQ0VAF6 134 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 PMVKQ15126 192 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 LINC00242Q5T6M2 205 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 REG3GQ6UW15 175 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 Q6ZRP5 223 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 Q6ZUT4 128 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 PHF5AQ7RTV0 110 aaKnown RBP2.36□□□□□ -2.03
NUP85-209ENST00000578987 C5orf38Q86SI9 138 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
NUP85-209ENST00000578987 CARD19Q96LW7 228 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms