RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
MKS1-207ENST00000578789 PKHD1L1Q86WI1 4243 aa9.09□□□□□ -0.95
MKS1-207ENST00000578789 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
MKS1-207ENST00000578789 PMCHL1Q16048 86 aa9.08□□□□□ -0.96
MKS1-207ENST00000578789 C2orf82Q6UX34 121 aa9.08□□□□□ -0.96
MKS1-207ENST00000578789 LINC00469Q8N7U9 141 aa9.08□□□□□ -0.96
MKS1-207ENST00000578789 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
MKS1-207ENST00000578789 CHCHD1Q96BP2 118 aaKnown RBP9.08□□□□□ -0.96
MKS1-207ENST00000578789 PACRGQ96M98 296 aaPredicted RBP9.08□□□□□ -0.96
MKS1-207ENST00000578789 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
MKS1-207ENST00000578789 SMIM1B2RUZ4 78 aa9.07□□□□□ -0.96
MKS1-207ENST00000578789 PRSS2P07478 247 aa9.07□□□□□ -0.96
MKS1-207ENST00000578789 ATP5LO75964 103 aa9.06□□□□□ -0.96
MKS1-207ENST00000578789 TRGC2P03986 189 aa9.06□□□□□ -0.96
MKS1-207ENST00000578789 IGLC3P0DOY3 106 aa9.06□□□□□ -0.96
MKS1-207ENST00000578789 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
MKS1-207ENST00000578789 COLCA2A8K830 154 aa9.05□□□□□ -0.96
MKS1-207ENST00000578789 Q6ZRP5 223 aa9.05□□□□□ -0.96
MKS1-207ENST00000578789 A0A1W2PNN7 141 aa9.04□□□□□ -0.96
MKS1-207ENST00000578789 CXCL5P42830 114 aa9.04□□□□□ -0.96
MKS1-207ENST00000578789 HNRNPA3P51991 378 aaKnown RBP9.04□□□□□ -0.96
MKS1-207ENST00000578789 CKS1BP61024 79 aa9.04□□□□□ -0.96
MKS1-207ENST00000578789 C9orf116Q5BN46 136 aaPredicted RBP9.04□□□□□ -0.96
MKS1-207ENST00000578789 C6orf226Q5I0X4 101 aa9.04□□□□□ -0.96
MKS1-207ENST00000578789 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
MKS1-207ENST00000578789 F8VRH5 84 aa9.02□□□□□ -0.97
MKS1-207ENST00000578789 H3BRM9 83 aa9.02□□□□□ -0.97
MKS1-207ENST00000578789 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.97
MKS1-207ENST00000578789 NDUFA6P56556 154 aa9.02□□□□□ -0.97
MKS1-207ENST00000578789 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
MKS1-207ENST00000578789 COX7B2Q8TF08 81 aa9.02□□□□□ -0.97
MKS1-207ENST00000578789 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
MKS1-207ENST00000578789 SPINK8P0C7L1 97 aa9.01□□□□□ -0.97
MKS1-207ENST00000578789 BAGE3Q86Y29 109 aa9.01□□□□□ -0.97
MKS1-207ENST00000578789 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
MKS1-207ENST00000578789 HSBP1O75506 76 aa9□□□□□ -0.97
MKS1-207ENST00000578789 LINC00310P59036 64 aa9□□□□□ -0.97
MKS1-207ENST00000578789 GAGE2EQ4V326 116 aa9□□□□□ -0.97
MKS1-207ENST00000578789 IFI27L1Q96BM0 104 aa9□□□□□ -0.97
MKS1-207ENST00000578789 GAGE2DQ9UEU5 116 aa9□□□□□ -0.97
MKS1-207ENST00000578789 FAT3Q8TDW7 4589 aa8.99□□□□□ -0.97
MKS1-207ENST00000578789 DMBT1Q9UGM3 2413 aaPredicted RBP8.99□□□□□ -0.97
MKS1-207ENST00000578789 TRAV12-1A0A0B4J245 112 aa8.99□□□□□ -0.97
MKS1-207ENST00000578789 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
MKS1-207ENST00000578789 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
MKS1-207ENST00000578789 SERF1AO75920 110 aa8.98□□□□□ -0.97
MKS1-207ENST00000578789 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
MKS1-207ENST00000578789 SCO1O75880 301 aa8.97□□□□□ -0.97
MKS1-207ENST00000578789 OXTP01178 125 aa8.97□□□□□ -0.97
MKS1-207ENST00000578789 KRTAP7-1Q8IUC3 87 aa8.97□□□□□ -0.97
MKS1-207ENST00000578789 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
MKS1-207ENST00000578789 CHTOPQ9Y3Y2 248 aaKnown RBP8.97□□□□□ -0.97
MKS1-207ENST00000578789 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.97
MKS1-207ENST00000578789 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.98
MKS1-207ENST00000578789 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.98
MKS1-207ENST00000578789 TMEM170BQ5T4T1 132 aa8.94□□□□□ -0.98
MKS1-207ENST00000578789 M0QXV9 152 aa8.93□□□□□ -0.98
MKS1-207ENST00000578789 NUPR1O60356 82 aa8.93□□□□□ -0.98
MKS1-207ENST00000578789 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
MKS1-207ENST00000578789 ODF1Q14990 250 aa8.93□□□□□ -0.98
MKS1-207ENST00000578789 PSORS1C2Q9UIG4 136 aa8.93□□□□□ -0.98
MKS1-207ENST00000578789 HERC1Q15751 4861 aa8.93□□□□□ -0.98
MKS1-207ENST00000578789 XAGE1AQ9HD64 81 aa8.92□□□□□ -0.98
MKS1-207ENST00000578789 TMEM223A0PJW6 202 aa8.91□□□□□ -0.98
MKS1-207ENST00000578789 SFTA2Q6UW10 78 aa8.91□□□□□ -0.98
MKS1-207ENST00000578789 HSPB8Q9UJY1 196 aa8.91□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BKO60814 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BJP06899 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BOP23527 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BBP33778 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BDP58876 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BCP62807 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 SRSF9Q13242 221 aaKnown RBP eCLIP8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST2H2BEQ16778 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.9□□□□□ -0.98
MKS1-207ENST00000578789 SERTAD4-AS1Q5TG53 156 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 SPINK6Q6UWN8 80 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BHQ93079 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BNQ99877 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 HIST1H2BMQ99879 126 aa8.9□□□□□ -0.98
MKS1-207ENST00000578789 ZNF625Q96I27 306 aaPredicted RBP8.89□□□□□ -0.99
MKS1-207ENST00000578789 PLA2G2DQ9UNK4 145 aa8.89□□□□□ -0.99
MKS1-207ENST00000578789 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
MKS1-207ENST00000578789 TP73-AS1Q9UF72 201 aa8.88□□□□□ -0.99
MKS1-207ENST00000578789 H0Y8G0 127 aa8.87□□□□□ -0.99
MKS1-207ENST00000578789 FABP4P15090 132 aa8.87□□□□□ -0.99
MKS1-207ENST00000578789 UBE2BP63146 152 aa8.87□□□□□ -0.99
MKS1-207ENST00000578789 COX17Q14061 63 aa8.87□□□□□ -0.99
MKS1-207ENST00000578789 ERG28Q9UKR5 140 aa8.87□□□□□ -0.99
MKS1-207ENST00000578789 C22orf24Q9Y442 160 aa8.87□□□□□ -0.99
MKS1-207ENST00000578789 PLNP26678 52 aa8.86□□□□□ -0.99
MKS1-207ENST00000578789 PFN2P35080 140 aa8.86□□□□□ -0.99
MKS1-207ENST00000578789 IGLV5-37A0A075B6J1 123 aa8.85□□□□□ -0.99
MKS1-207ENST00000578789 IGLV7-43P04211 117 aa8.85□□□□□ -0.99
MKS1-207ENST00000578789 MT1HL1P0DM35 61 aa8.85□□□□□ -0.99
MKS1-207ENST00000578789 LBHQ53QV2 105 aaPredicted RBP8.85□□□□□ -0.99
MKS1-207ENST00000578789 MRPL55Q7Z7F7 128 aaKnown RBP8.84□□□□□ -0.99
MKS1-207ENST00000578789 DPM2O94777 84 aa8.83□□□□□ -1
MKS1-207ENST00000578789 REG3GQ6UW15 175 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms