RNA–Protein interactions for RNA: ENST00000577561.1

NUP85-205, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-205ENST00000577561 Q8IZM0 81 aa12.18□□□□□ -0.46
NUP85-205ENST00000577561 PACRGQ96M98 296 aaPredicted RBP12.18□□□□□ -0.46
NUP85-205ENST00000577561 J3QL48 77 aa12.17□□□□□ -0.46
NUP85-205ENST00000577561 C9orf116Q5BN46 136 aaPredicted RBP12.17□□□□□ -0.46
NUP85-205ENST00000577561 C6orf226Q5I0X4 101 aa12.17□□□□□ -0.46
NUP85-205ENST00000577561 Q6ZRP5 223 aa12.17□□□□□ -0.46
NUP85-205ENST00000577561 LINC00469Q8N7U9 141 aa12.17□□□□□ -0.46
NUP85-205ENST00000577561 TOMM7Q9P0U1 55 aa12.17□□□□□ -0.46
NUP85-205ENST00000577561 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
NUP85-205ENST00000577561 HBDP02042 147 aa12.16□□□□□ -0.46
NUP85-205ENST00000577561 OXTP01178 125 aa12.15□□□□□ -0.46
NUP85-205ENST00000577561 CKS1BP61024 79 aa12.15□□□□□ -0.46
NUP85-205ENST00000577561 PRR3P79522 188 aaKnown RBP12.15□□□□□ -0.46
NUP85-205ENST00000577561 PMCHL1Q16048 86 aa12.14□□□□□ -0.47
NUP85-205ENST00000577561 SMIM1B2RUZ4 78 aa12.13□□□□□ -0.47
NUP85-205ENST00000577561 NDUFC2-KCTD14E9PQ53 114 aa12.13□□□□□ -0.47
NUP85-205ENST00000577561 PDZD11Q5EBL8 140 aa12.13□□□□□ -0.47
NUP85-205ENST00000577561 GAGE2EQ4V326 116 aa12.12□□□□□ -0.47
NUP85-205ENST00000577561 GAGE2DQ9UEU5 116 aa12.12□□□□□ -0.47
NUP85-205ENST00000577561 ATP5LO75964 103 aa12.1□□□□□ -0.47
NUP85-205ENST00000577561 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
NUP85-205ENST00000577561 NDUFA6P56556 154 aa12.1□□□□□ -0.47
NUP85-205ENST00000577561 CHCHD1Q96BP2 118 aaKnown RBP12.1□□□□□ -0.47
NUP85-205ENST00000577561 FAM168BA1KXE4 195 aa12.09□□□□□ -0.47
NUP85-205ENST00000577561 F8VRH5 84 aa12.09□□□□□ -0.47
NUP85-205ENST00000577561 CXCL5P42830 114 aa12.09□□□□□ -0.47
NUP85-205ENST00000577561 H3BRM9 83 aa12.08□□□□□ -0.48
NUP85-205ENST00000577561 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
NUP85-205ENST00000577561 PHF5AQ7RTV0 110 aaKnown RBP12.08□□□□□ -0.48
NUP85-205ENST00000577561 COX7B2Q8TF08 81 aa12.08□□□□□ -0.48
NUP85-205ENST00000577561 TRGC2P03986 189 aa12.06□□□□□ -0.48
NUP85-205ENST00000577561 C9orf129Q5T035 196 aaKnown RBP12.06□□□□□ -0.48
NUP85-205ENST00000577561 FAM19A5Q7Z5A7 132 aaPredicted RBP12.05□□□□□ -0.48
NUP85-205ENST00000577561 BAGE3Q86Y29 109 aa12.05□□□□□ -0.48
NUP85-205ENST00000577561 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
NUP85-205ENST00000577561 KRTAP7-1Q8IUC3 87 aa12.04□□□□□ -0.48
NUP85-205ENST00000577561 PSORS1C2Q9UIG4 136 aa12.04□□□□□ -0.48
NUP85-205ENST00000577561 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
NUP85-205ENST00000577561 COLCA2A8K830 154 aa12.02□□□□□ -0.49
NUP85-205ENST00000577561 SRSF9Q13242 221 aaKnown RBP eCLIP12.02□□□□□ -0.49
NUP85-205ENST00000577561 SPINK6Q6UWN8 80 aa12.02□□□□□ -0.49
NUP85-205ENST00000577561 IFI27L1Q96BM0 104 aa12.01□□□□□ -0.49
NUP85-205ENST00000577561 C11orf86A6NJI1 115 aa12□□□□□ -0.49
NUP85-205ENST00000577561 M0QXV9 152 aa12□□□□□ -0.49
NUP85-205ENST00000577561 HSBP1O75506 76 aa12□□□□□ -0.49
NUP85-205ENST00000577561 XAGE1AQ9HD64 81 aa12□□□□□ -0.49
NUP85-205ENST00000577561 CHTOPQ9Y3Y2 248 aaKnown RBP12□□□□□ -0.49
NUP85-205ENST00000577561 TRAV12-1A0A0B4J245 112 aa11.99□□□□□ -0.49
NUP85-205ENST00000577561 FAM19A2Q8N3H0 131 aa11.99□□□□□ -0.49
NUP85-205ENST00000577561 C1orf137Q5JT78 98 aa11.98□□□□□ -0.49
NUP85-205ENST00000577561 TMEM170BQ5T4T1 132 aa11.98□□□□□ -0.49
NUP85-205ENST00000577561 KRTAP11-1Q8IUC1 163 aa11.98□□□□□ -0.49
NUP85-205ENST00000577561 MT1HL1P0DM35 61 aa11.97□□□□□ -0.49
NUP85-205ENST00000577561 LINC00310P59036 64 aa11.96□□□□□ -0.49
NUP85-205ENST00000577561 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
NUP85-205ENST00000577561 SERF1AO75920 110 aa11.95□□□□□ -0.5
NUP85-205ENST00000577561 UBE2BP63146 152 aa11.95□□□□□ -0.5
NUP85-205ENST00000577561 ODF1Q14990 250 aa11.95□□□□□ -0.5
NUP85-205ENST00000577561 C22orf24Q9Y442 160 aa11.94□□□□□ -0.5
NUP85-205ENST00000577561 TNXBP22105 4242 aa11.94□□□□□ -0.5
NUP85-205ENST00000577561 REG3GQ6UW15 175 aa11.93□□□□□ -0.5
NUP85-205ENST00000577561 LINC01600Q96MT4 127 aa11.93□□□□□ -0.5
NUP85-205ENST00000577561 LEPROTL1O95214 131 aa11.92□□□□□ -0.5
NUP85-205ENST00000577561 IGLV7-43P04211 117 aa11.92□□□□□ -0.5
NUP85-205ENST00000577561 SCO1O75880 301 aa11.91□□□□□ -0.5
NUP85-205ENST00000577561 LBHQ53QV2 105 aaPredicted RBP11.91□□□□□ -0.5
NUP85-205ENST00000577561 SFTA2Q6UW10 78 aa11.91□□□□□ -0.5
NUP85-205ENST00000577561 TP73-AS1Q9UF72 201 aa11.91□□□□□ -0.5
NUP85-205ENST00000577561 PLA2G2DQ9UNK4 145 aa11.91□□□□□ -0.5
NUP85-205ENST00000577561 TMEM223A0PJW6 202 aa11.9□□□□□ -0.5
NUP85-205ENST00000577561 NUPR1O60356 82 aa11.9□□□□□ -0.5
NUP85-205ENST00000577561 PFN2P35080 140 aa11.89□□□□□ -0.51
NUP85-205ENST00000577561 ERG28Q9UKR5 140 aa11.89□□□□□ -0.51
NUP85-205ENST00000577561 COX17Q14061 63 aa11.88□□□□□ -0.51
NUP85-205ENST00000577561 MRPL55Q7Z7F7 128 aaKnown RBP11.88□□□□□ -0.51
NUP85-205ENST00000577561 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
NUP85-205ENST00000577561 H0Y8G0 127 aa11.87□□□□□ -0.51
NUP85-205ENST00000577561 HSPB8Q9UJY1 196 aa11.87□□□□□ -0.51
NUP85-205ENST00000577561 IGLV5-37A0A075B6J1 123 aa11.86□□□□□ -0.51
NUP85-205ENST00000577561 DIRC1Q969H9 104 aa11.86□□□□□ -0.51
NUP85-205ENST00000577561 FABP4P15090 132 aa11.85□□□□□ -0.51
NUP85-205ENST00000577561 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
NUP85-205ENST00000577561 HMCN2Q8NDA2 5059 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BKO60814 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BJP06899 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BOP23527 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BBP33778 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BDP58876 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 KRTAP10-8P60410 259 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BCP62807 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST2H2BEQ16778 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BHQ93079 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 LINC00167Q96N53 147 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BNQ99877 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 HIST1H2BMQ99879 126 aa11.83□□□□□ -0.52
NUP85-205ENST00000577561 H0Y9J4 135 aa11.82□□□□□ -0.52
NUP85-205ENST00000577561 NKAPP1Q8N9T2 125 aa11.82□□□□□ -0.52
NUP85-205ENST00000577561 PLNP26678 52 aa11.81□□□□□ -0.52
NUP85-205ENST00000577561 RPL37AP8A6NKH3 93 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms