RNA–Protein interactions for RNA: ENST00000572441.5

ABR-217, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4 BASIC

Gene ABR, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-217ENST00000572441 C6orf48Q9UBA6 75 aa11.3□□□□□ -0.6
ABR-217ENST00000572441 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
ABR-217ENST00000572441 ATP5LO75964 103 aa11.29□□□□□ -0.6
ABR-217ENST00000572441 Q8IZM0 81 aa11.29□□□□□ -0.6
ABR-217ENST00000572441 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
ABR-217ENST00000572441 KRTAP29-1A8MX34 341 aaPredicted RBP11.28□□□□□ -0.6
ABR-217ENST00000572441 TRGC2P03986 189 aa11.28□□□□□ -0.6
ABR-217ENST00000572441 FAT3Q8TDW7 4589 aa11.28□□□□□ -0.6
ABR-217ENST00000572441 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
ABR-217ENST00000572441 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
ABR-217ENST00000572441 PDZD11Q5EBL8 140 aa11.27□□□□□ -0.61
ABR-217ENST00000572441 BAGE3Q86Y29 109 aa11.27□□□□□ -0.61
ABR-217ENST00000572441 IGLV5-45A0A087WSX0 123 aa11.26□□□□□ -0.61
ABR-217ENST00000572441 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
ABR-217ENST00000572441 H3BRM9 83 aa11.25□□□□□ -0.61
ABR-217ENST00000572441 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
ABR-217ENST00000572441 C9orf116Q5BN46 136 aaPredicted RBP11.25□□□□□ -0.61
ABR-217ENST00000572441 Q6ZRP5 223 aa11.25□□□□□ -0.61
ABR-217ENST00000572441 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
ABR-217ENST00000572441 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
ABR-217ENST00000572441 HSBP1O75506 76 aa11.24□□□□□ -0.61
ABR-217ENST00000572441 SPINK8P0C7L1 97 aa11.24□□□□□ -0.61
ABR-217ENST00000572441 IGLC3P0DOY3 106 aa11.24□□□□□ -0.61
ABR-217ENST00000572441 CXCL5P42830 114 aa11.24□□□□□ -0.61
ABR-217ENST00000572441 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
ABR-217ENST00000572441 COLCA2A8K830 154 aa11.22□□□□□ -0.61
ABR-217ENST00000572441 F8VRH5 84 aa11.22□□□□□ -0.61
ABR-217ENST00000572441 COX7B2Q8TF08 81 aa11.22□□□□□ -0.61
ABR-217ENST00000572441 IFI27L1Q96BM0 104 aa11.2□□□□□ -0.62
ABR-217ENST00000572441 UBR4Q5T4S7 5183 aa11.19□□□□□ -0.62
ABR-217ENST00000572441 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
ABR-217ENST00000572441 HNRNPA3P51991 378 aaKnown RBP11.19□□□□□ -0.62
ABR-217ENST00000572441 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
ABR-217ENST00000572441 FAM19A2Q8N3H0 131 aa11.19□□□□□ -0.62
ABR-217ENST00000572441 PKHD1L1Q86WI1 4243 aa11.19□□□□□ -0.62
ABR-217ENST00000572441 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
ABR-217ENST00000572441 FAM168BA1KXE4 195 aa11.17□□□□□ -0.62
ABR-217ENST00000572441 SCO1O75880 301 aa11.17□□□□□ -0.62
ABR-217ENST00000572441 SERF1AO75920 110 aa11.17□□□□□ -0.62
ABR-217ENST00000572441 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
ABR-217ENST00000572441 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
ABR-217ENST00000572441 TRAV12-1A0A0B4J245 112 aa11.16□□□□□ -0.62
ABR-217ENST00000572441 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
ABR-217ENST00000572441 PHF5AQ7RTV0 110 aaKnown RBP11.16□□□□□ -0.62
ABR-217ENST00000572441 IGLV5-39A0A0G2JS06 123 aa11.14□□□□□ -0.63
ABR-217ENST00000572441 LEPROTL1O95214 131 aa11.14□□□□□ -0.63
ABR-217ENST00000572441 C9orf129Q5T035 196 aaKnown RBP11.14□□□□□ -0.63
ABR-217ENST00000572441 OXTP01178 125 aa11.13□□□□□ -0.63
ABR-217ENST00000572441 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
ABR-217ENST00000572441 H0Y8G0 127 aa11.12□□□□□ -0.63
ABR-217ENST00000572441 M0QXV9 152 aa11.12□□□□□ -0.63
ABR-217ENST00000572441 LINC00310P59036 64 aa11.12□□□□□ -0.63
ABR-217ENST00000572441 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
ABR-217ENST00000572441 SERTAD4-AS1Q5TG53 156 aa11.1□□□□□ -0.63
ABR-217ENST00000572441 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
ABR-217ENST00000572441 NUPR1O60356 82 aa11.09□□□□□ -0.63
ABR-217ENST00000572441 UBE2BP63146 152 aa11.09□□□□□ -0.63
ABR-217ENST00000572441 FABP4P15090 132 aa11.08□□□□□ -0.64
ABR-217ENST00000572441 C1orf137Q5JT78 98 aa11.08□□□□□ -0.64
ABR-217ENST00000572441 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
ABR-217ENST00000572441 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
ABR-217ENST00000572441 TMEM223A0PJW6 202 aa11.07□□□□□ -0.64
ABR-217ENST00000572441 PFN2P35080 140 aa11.07□□□□□ -0.64
ABR-217ENST00000572441 SPINK6Q6UWN8 80 aa11.07□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BKO60814 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BJP06899 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BOP23527 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BBP33778 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BDP58876 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BCP62807 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 ODF1Q14990 250 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST2H2BEQ16778 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BHQ93079 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BNQ99877 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 HIST1H2BMQ99879 126 aa11.06□□□□□ -0.64
ABR-217ENST00000572441 ZNF625Q96I27 306 aaPredicted RBP11.05□□□□□ -0.64
ABR-217ENST00000572441 ERG28Q9UKR5 140 aa11.05□□□□□ -0.64
ABR-217ENST00000572441 C22orf24Q9Y442 160 aa11.05□□□□□ -0.64
ABR-217ENST00000572441 COX17Q14061 63 aa11.04□□□□□ -0.64
ABR-217ENST00000572441 LBHQ53QV2 105 aaPredicted RBP11.04□□□□□ -0.64
ABR-217ENST00000572441 PLNP26678 52 aa11.03□□□□□ -0.64
ABR-217ENST00000572441 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
ABR-217ENST00000572441 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
ABR-217ENST00000572441 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
ABR-217ENST00000572441 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
ABR-217ENST00000572441 KRTAP11-1Q8IUC1 163 aa11.02□□□□□ -0.65
ABR-217ENST00000572441 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
ABR-217ENST00000572441 TP73-AS1Q9UF72 201 aa11.01□□□□□ -0.65
ABR-217ENST00000572441 DPM2O94777 84 aa11□□□□□ -0.65
ABR-217ENST00000572441 IGLV7-43P04211 117 aa11□□□□□ -0.65
ABR-217ENST00000572441 MT1HL1P0DM35 61 aa10.99□□□□□ -0.65
ABR-217ENST00000572441 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
ABR-217ENST00000572441 SND1-IT1Q9HBX3 110 aa10.99□□□□□ -0.65
ABR-217ENST00000572441 IGKCP01834 107 aa10.98□□□□□ -0.65
ABR-217ENST00000572441 LINC00158P58513 81 aa10.98□□□□□ -0.65
ABR-217ENST00000572441 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
ABR-217ENST00000572441 S100A1P23297 94 aa10.97□□□□□ -0.65
ABR-217ENST00000572441 HERVK_113P61574 105 aa10.97□□□□□ -0.65
ABR-217ENST00000572441 ATP6V1G1O75348 118 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms