RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
SCARF1-205ENST00000571272 WFDC11Q8NEX6 87 aa12.18□□□□□ -0.46
SCARF1-205ENST00000571272 LINC00959A0A1B0GUT2 108 aa12.17□□□□□ -0.46
SCARF1-205ENST00000571272 H0YGX0 51 aa12.17□□□□□ -0.46
SCARF1-205ENST00000571272 NCR3O14931 201 aa12.17□□□□□ -0.46
SCARF1-205ENST00000571272 C3orf22Q8N5N4 141 aa12.16□□□□□ -0.46
SCARF1-205ENST00000571272 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
SCARF1-205ENST00000571272 CXCL5P42830 114 aa12.15□□□□□ -0.46
SCARF1-205ENST00000571272 LINC01006Q8NI28 216 aa12.15□□□□□ -0.46
SCARF1-205ENST00000571272 A0A096LPF7 62 aa12.15□□□□□ -0.46
SCARF1-205ENST00000571272 IGLV1-51P01701 117 aa12.15□□□□□ -0.46
SCARF1-205ENST00000571272 CMC4P56277 68 aaPredicted RBP12.14□□□□□ -0.47
SCARF1-205ENST00000571272 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
SCARF1-205ENST00000571272 LINC00846Q9NV44 126 aa12.14□□□□□ -0.47
SCARF1-205ENST00000571272 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
SCARF1-205ENST00000571272 TMEM126AQ9H061 195 aa12.13□□□□□ -0.47
SCARF1-205ENST00000571272 UQCRQO14949 82 aa12.13□□□□□ -0.47
SCARF1-205ENST00000571272 GYPEP15421 78 aa12.12□□□□□ -0.47
SCARF1-205ENST00000571272 KLK5Q9Y337 293 aaPredicted RBP12.12□□□□□ -0.47
SCARF1-205ENST00000571272 OBSCN-AS1Q96MR7 158 aa12.1□□□□□ -0.47
SCARF1-205ENST00000571272 SS18Q15532 418 aa12.09□□□□□ -0.47
SCARF1-205ENST00000571272 LINC00526Q96FQ7 95 aa12.09□□□□□ -0.47
SCARF1-205ENST00000571272 A0A087WVE0 104 aa12.08□□□□□ -0.47
SCARF1-205ENST00000571272 ORMDL1Q9P0S3 153 aa12.08□□□□□ -0.48
SCARF1-205ENST00000571272 COX7CP15954 63 aa12.08□□□□□ -0.48
SCARF1-205ENST00000571272 ZNF843Q8N446 348 aa12.08□□□□□ -0.48
SCARF1-205ENST00000571272 LY6G6DO95868 133 aa12.07□□□□□ -0.48
SCARF1-205ENST00000571272 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
SCARF1-205ENST00000571272 HIST1H4AP62805 103 aaKnown RBP12.06□□□□□ -0.48
SCARF1-205ENST00000571272 Q8IZM0 81 aa12.05□□□□□ -0.48
SCARF1-205ENST00000571272 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
SCARF1-205ENST00000571272 ATOX1O00244 68 aa12.04□□□□□ -0.48
SCARF1-205ENST00000571272 NANOS2P60321 138 aaKnown RBP12.04□□□□□ -0.48
SCARF1-205ENST00000571272 C9orf116Q5BN46 136 aaPredicted RBP12.04□□□□□ -0.48
SCARF1-205ENST00000571272 Q6JHZ5 121 aa12.04□□□□□ -0.48
SCARF1-205ENST00000571272 Q8N3U1 123 aa12.04□□□□□ -0.48
SCARF1-205ENST00000571272 A0A1B0GX51 115 aa12.03□□□□□ -0.48
SCARF1-205ENST00000571272 LINC00269Q8N2A0 174 aa12.03□□□□□ -0.48
SCARF1-205ENST00000571272 HIVEP2P31629 2446 aa12.03□□□□□ -0.48
SCARF1-205ENST00000571272 A0A1B0GUV1 79 aa12.03□□□□□ -0.48
SCARF1-205ENST00000571272 RPL18AQ02543 176 aaKnown RBP12.03□□□□□ -0.48
SCARF1-205ENST00000571272 KIR2DL5BQ8NHK3 375 aa12.03□□□□□ -0.48
SCARF1-205ENST00000571272 hADV29S1A0JD25 119 aa12.02□□□□□ -0.49
SCARF1-205ENST00000571272 RNASE1P07998 156 aaKnown RBP12.02□□□□□ -0.49
SCARF1-205ENST00000571272 Q8N814 137 aa12.01□□□□□ -0.49
SCARF1-205ENST00000571272 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
SCARF1-205ENST00000571272 DEFB4AO15263 64 aa12□□□□□ -0.49
SCARF1-205ENST00000571272 CYSTM1Q9H1C7 97 aa12□□□□□ -0.49
SCARF1-205ENST00000571272 C16orf95Q9H693 158 aa12□□□□□ -0.49
SCARF1-205ENST00000571272 PRO0255Q9UI72 69 aa12□□□□□ -0.49
SCARF1-205ENST00000571272 CCKP06307 115 aa12□□□□□ -0.49
SCARF1-205ENST00000571272 CFAP161Q6P656 301 aa12□□□□□ -0.49
SCARF1-205ENST00000571272 KIAA0087Q14695 138 aa11.99□□□□□ -0.49
SCARF1-205ENST00000571272 LOC107984640A0A0U1RRK4 108 aa11.99□□□□□ -0.49
SCARF1-205ENST00000571272 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
SCARF1-205ENST00000571272 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
SCARF1-205ENST00000571272 X6R8D5 127 aa11.98□□□□□ -0.49
SCARF1-205ENST00000571272 ANGP03950 147 aaKnown RBP11.98□□□□□ -0.49
SCARF1-205ENST00000571272 CRYGAP11844 174 aa11.98□□□□□ -0.49
SCARF1-205ENST00000571272 ITPR2Q14571 2701 aa11.98□□□□□ -0.49
SCARF1-205ENST00000571272 Q8NDZ9 215 aa11.97□□□□□ -0.49
SCARF1-205ENST00000571272 WFDC9Q8NEX5 89 aa11.97□□□□□ -0.49
SCARF1-205ENST00000571272 KRTAP1-1Q07627 177 aa11.97□□□□□ -0.49
SCARF1-205ENST00000571272 ANK3Q12955 4377 aaKnown RBP11.97□□□□□ -0.49
SCARF1-205ENST00000571272 USP17L23D6RBM5 183 aa11.97□□□□□ -0.49
SCARF1-205ENST00000571272 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
SCARF1-205ENST00000571272 CD164L2Q6UWJ8 174 aa11.97□□□□□ -0.49
SCARF1-205ENST00000571272 VWFP04275 2813 aa11.96□□□□□ -0.49
SCARF1-205ENST00000571272 LINC00167Q96N53 147 aa11.96□□□□□ -0.49
SCARF1-205ENST00000571272 TMEM256-PLSCR3K7ERE1 68 aa11.95□□□□□ -0.5
SCARF1-205ENST00000571272 HILS1P60008 231 aa11.95□□□□□ -0.5
SCARF1-205ENST00000571272 LINC00482Q8N8I6 264 aa11.95□□□□□ -0.5
SCARF1-205ENST00000571272 JMJD7-PLA2G4BH0Y9G9 81 aa11.95□□□□□ -0.5
SCARF1-205ENST00000571272 REG3AQ06141 175 aa11.94□□□□□ -0.5
SCARF1-205ENST00000571272 NDUFC2O95298 119 aa11.93□□□□□ -0.5
SCARF1-205ENST00000571272 SERP2Q8N6R1 65 aa11.93□□□□□ -0.5
SCARF1-205ENST00000571272 S100A7L2Q5SY68 101 aa11.93□□□□□ -0.5
SCARF1-205ENST00000571272 COX17Q14061 63 aa11.92□□□□□ -0.5
SCARF1-205ENST00000571272 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
SCARF1-205ENST00000571272 KRTAP10-3P60369 221 aa11.92□□□□□ -0.5
SCARF1-205ENST00000571272 C10orf25Q5T742 122 aa11.91□□□□□ -0.5
SCARF1-205ENST00000571272 PDZD2O15018 2839 aa11.91□□□□□ -0.5
SCARF1-205ENST00000571272 DEFB135Q30KP9 77 aa11.91□□□□□ -0.5
SCARF1-205ENST00000571272 TENM4Q6N022 2769 aa11.9□□□□□ -0.5
SCARF1-205ENST00000571272 UNQ6190/PRO20217Q6UXQ8 127 aa11.9□□□□□ -0.5
SCARF1-205ENST00000571272 FAM19A1Q7Z5A9 133 aa11.9□□□□□ -0.5
SCARF1-205ENST00000571272 ENHOQ6UWT2 76 aa11.89□□□□□ -0.51
SCARF1-205ENST00000571272 SPATA3Q8NHX4 192 aa11.89□□□□□ -0.51
SCARF1-205ENST00000571272 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
SCARF1-205ENST00000571272 TRAV23DV6A0A075B6W5 121 aa11.89□□□□□ -0.51
SCARF1-205ENST00000571272 UPK3BQ9BT76 320 aa11.88□□□□□ -0.51
SCARF1-205ENST00000571272 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
SCARF1-205ENST00000571272 LINC00575Q6W349 94 aa11.87□□□□□ -0.51
SCARF1-205ENST00000571272 J3KT08 172 aa11.86□□□□□ -0.51
SCARF1-205ENST00000571272 SPAG11BQ08648 103 aa11.86□□□□□ -0.51
SCARF1-205ENST00000571272 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
SCARF1-205ENST00000571272 HTN3P15516 51 aa11.85□□□□□ -0.51
SCARF1-205ENST00000571272 DAD1P61803 113 aa11.85□□□□□ -0.51
SCARF1-205ENST00000571272 UBL5Q9BZL1 73 aa11.85□□□□□ -0.51
SCARF1-205ENST00000571272 LAMTOR3Q9UHA4 124 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms