RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 MT1HP80294 61 aa4.88□□□□□ -1.63
SMG1-216ENST00000569122 Q8IZM0 81 aa4.88□□□□□ -1.63
SMG1-216ENST00000569122 C2orf88Q9BSF0 95 aa4.88□□□□□ -1.63
SMG1-216ENST00000569122 ALKBH7Q9BT30 221 aaPredicted RBP4.88□□□□□ -1.63
SMG1-216ENST00000569122 TOMM7Q9P0U1 55 aa4.88□□□□□ -1.63
SMG1-216ENST00000569122 PYGO1Q9Y3Y4 419 aa4.88□□□□□ -1.63
SMG1-216ENST00000569122 SMKR1H3BMG3 65 aa4.87□□□□□ -1.63
SMG1-216ENST00000569122 CXCL5P42830 114 aa4.87□□□□□ -1.63
SMG1-216ENST00000569122 PNRC1Q12796 327 aaPredicted RBP4.87□□□□□ -1.63
SMG1-216ENST00000569122 FAM104AQ969W3 186 aa4.87□□□□□ -1.63
SMG1-216ENST00000569122 IGLV5-37A0A075B6J1 123 aa4.86□□□□□ -1.63
SMG1-216ENST00000569122 GAGE10A6NGK3 116 aa4.86□□□□□ -1.63
SMG1-216ENST00000569122 RAB5AP20339 215 aa4.86□□□□□ -1.63
SMG1-216ENST00000569122 CKS2P33552 79 aa4.86□□□□□ -1.63
SMG1-216ENST00000569122 TEX43Q6ZNM6 134 aa4.86□□□□□ -1.63
SMG1-216ENST00000569122 PLEKHB2Q96CS7 222 aa4.86□□□□□ -1.63
SMG1-216ENST00000569122 TMEM141Q96I45 108 aa4.86□□□□□ -1.63
SMG1-216ENST00000569122 HMSDA8MTL9 139 aa4.85□□□□□ -1.63
SMG1-216ENST00000569122 M0R2T5 61 aa4.85□□□□□ -1.63
SMG1-216ENST00000569122 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
SMG1-216ENST00000569122 SEC11AP67812 179 aa4.85□□□□□ -1.63
SMG1-216ENST00000569122 FAM104BQ5XKR9 115 aa4.85□□□□□ -1.63
SMG1-216ENST00000569122 FAM19A1Q7Z5A9 133 aa4.85□□□□□ -1.63
SMG1-216ENST00000569122 CBLN2Q8IUK8 224 aa4.85□□□□□ -1.63
SMG1-216ENST00000569122 C3orf22Q8N5N4 141 aa4.85□□□□□ -1.63
SMG1-216ENST00000569122 ZNF706Q9Y5V0 76 aaPredicted RBP4.85□□□□□ -1.63
SMG1-216ENST00000569122 TMEM250H0YL14 139 aa4.84□□□□□ -1.63
SMG1-216ENST00000569122 MRPL51Q4U2R6 128 aaKnown RBP4.84□□□□□ -1.63
SMG1-216ENST00000569122 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.63
SMG1-216ENST00000569122 IGLV4-3A0A075B6K6 122 aa4.83□□□□□ -1.64
SMG1-216ENST00000569122 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
SMG1-216ENST00000569122 A0A1B0GW15 77 aa4.83□□□□□ -1.64
SMG1-216ENST00000569122 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
SMG1-216ENST00000569122 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
SMG1-216ENST00000569122 EIF5A2Q9GZV4 153 aaKnown RBP4.83□□□□□ -1.64
SMG1-216ENST00000569122 VCX2Q9H322 139 aa4.83□□□□□ -1.64
SMG1-216ENST00000569122 PPBPP02775 128 aa4.82□□□□□ -1.64
SMG1-216ENST00000569122 NPSP0C0P6 89 aa4.82□□□□□ -1.64
SMG1-216ENST00000569122 HERVK_113P63121 156 aa4.82□□□□□ -1.64
SMG1-216ENST00000569122 PRLHP81277 87 aa4.82□□□□□ -1.64
SMG1-216ENST00000569122 Q8NBF4 154 aa4.82□□□□□ -1.64
SMG1-216ENST00000569122 GEMIN7Q9H840 131 aaKnown RBP4.82□□□□□ -1.64
SMG1-216ENST00000569122 OSTCQ9NRP0 149 aa4.82□□□□□ -1.64
SMG1-216ENST00000569122 F8W036 122 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 SLC25A20O43772 301 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 S100A8P05109 93 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 PAPPA-AS1Q5QFB9 102 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 LINC01551Q86U37 167 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 TMEM126AQ9H061 195 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 NAT8BQ9UHF3 227 aa4.81□□□□□ -1.64
SMG1-216ENST00000569122 RPL24P83731 157 aaKnown RBP4.8□□□□□ -1.64
SMG1-216ENST00000569122 FAM19A3Q7Z5A8 133 aa4.8□□□□□ -1.64
SMG1-216ENST00000569122 SPRR4Q96PI1 79 aa4.8□□□□□ -1.64
SMG1-216ENST00000569122 HIGD2AQ9BW72 106 aa4.8□□□□□ -1.64
SMG1-216ENST00000569122 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
SMG1-216ENST00000569122 SMLR1H3BR10 107 aa4.79□□□□□ -1.64
SMG1-216ENST00000569122 C2orf66Q6UXQ4 117 aa4.79□□□□□ -1.64
SMG1-216ENST00000569122 AMELXQ99217 191 aa4.79□□□□□ -1.64
SMG1-216ENST00000569122 CYSLTR1Q9Y271 337 aa4.79□□□□□ -1.64
SMG1-216ENST00000569122 D6R8Y8 96 aa4.78□□□□□ -1.64
SMG1-216ENST00000569122 CEBPGP53567 150 aa4.78□□□□□ -1.64
SMG1-216ENST00000569122 SMIM7Q9BQ49 75 aa4.78□□□□□ -1.64
SMG1-216ENST00000569122 TMEM238C9JI98 176 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 M0R378 163 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 G0S2P27469 103 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 RAB5BP61020 215 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 FAM74A3Q4VXF1 159 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 PDZD11Q5EBL8 140 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 ORMDL3Q8N138 153 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 Q8N377 158 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 CDKN2A-AS1Q9UH64 79 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 V9GYV3 84 aa4.77□□□□□ -1.65
SMG1-216ENST00000569122 ATP5LO75964 103 aa4.76□□□□□ -1.65
SMG1-216ENST00000569122 NPYP01303 97 aa4.76□□□□□ -1.65
SMG1-216ENST00000569122 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
SMG1-216ENST00000569122 COX6B2Q6YFQ2 88 aa4.76□□□□□ -1.65
SMG1-216ENST00000569122 K7EMI3 77 aa4.75□□□□□ -1.65
SMG1-216ENST00000569122 ORMDL2Q53FV1 153 aa4.75□□□□□ -1.65
SMG1-216ENST00000569122 TMEM136Q6ZRR5 245 aa4.75□□□□□ -1.65
SMG1-216ENST00000569122 LAMTOR2Q9Y2Q5 125 aa4.75□□□□□ -1.65
SMG1-216ENST00000569122 SMIM27A0A1W2PRY6 76 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 PRSS47A8MTI9 375 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 SCO1O75880 301 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 VPREB1P12018 145 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 BLOC1S1P78537 153 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 AKAP14Q86UN6 197 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 PRELID3AQ96N28 172 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 MAP1LC3AQ9H492 121 aa4.74□□□□□ -1.65
SMG1-216ENST00000569122 IGIPA6NJ69 53 aa4.73□□□□□ -1.65
SMG1-216ENST00000569122 SMIM1B2RUZ4 78 aa4.73□□□□□ -1.65
SMG1-216ENST00000569122 CFC1P0CG37 223 aa4.73□□□□□ -1.65
SMG1-216ENST00000569122 COX17Q14061 63 aa4.73□□□□□ -1.65
SMG1-216ENST00000569122 ZC2HC1BQ5TFG8 222 aa4.73□□□□□ -1.65
SMG1-216ENST00000569122 SLC51BQ86UW2 128 aa4.73□□□□□ -1.65
SMG1-216ENST00000569122 LOC389332A0A1B0GUA5 103 aa4.72□□□□□ -1.65
SMG1-216ENST00000569122 LINC00483Q53H64 154 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms