RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 FA2HQ7L5A8 372 aa5.08□□□□□ -1.6
HDGFL3-205ENST00000568129 KRTAP7-1Q8IUC3 87 aa5.08□□□□□ -1.6
HDGFL3-205ENST00000568129 NDUFC2-KCTD14E9PQ53 114 aa5.07□□□□□ -1.6
HDGFL3-205ENST00000568129 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
HDGFL3-205ENST00000568129 PMVKQ15126 192 aa5.07□□□□□ -1.6
HDGFL3-205ENST00000568129 C2orf82Q6UX34 121 aa5.07□□□□□ -1.6
HDGFL3-205ENST00000568129 SMIM1B2RUZ4 78 aa5.06□□□□□ -1.6
HDGFL3-205ENST00000568129 J3QL48 77 aa5.06□□□□□ -1.6
HDGFL3-205ENST00000568129 IGLC3P0DOY3 106 aa5.06□□□□□ -1.6
HDGFL3-205ENST00000568129 RAB5BP61020 215 aa5.06□□□□□ -1.6
HDGFL3-205ENST00000568129 SPINK6Q6UWN8 80 aa5.06□□□□□ -1.6
HDGFL3-205ENST00000568129 GEMIN7Q9H840 131 aaKnown RBP5.06□□□□□ -1.6
HDGFL3-205ENST00000568129 SMCO4Q9NRQ5 59 aa5.06□□□□□ -1.6
HDGFL3-205ENST00000568129 HBDP02042 147 aa5.05□□□□□ -1.6
HDGFL3-205ENST00000568129 CXCL5P42830 114 aa5.05□□□□□ -1.6
HDGFL3-205ENST00000568129 RPL18AQ02543 176 aaKnown RBP5.05□□□□□ -1.6
HDGFL3-205ENST00000568129 C6orf226Q5I0X4 101 aa5.05□□□□□ -1.6
HDGFL3-205ENST00000568129 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
HDGFL3-205ENST00000568129 F8VRH5 84 aa5.04□□□□□ -1.6
HDGFL3-205ENST00000568129 C9orf129Q5T035 196 aaKnown RBP5.04□□□□□ -1.6
HDGFL3-205ENST00000568129 CHCHD1Q96BP2 118 aaKnown RBP5.04□□□□□ -1.6
HDGFL3-205ENST00000568129 PACRGQ96M98 296 aaPredicted RBP5.04□□□□□ -1.6
HDGFL3-205ENST00000568129 LINC01600Q96MT4 127 aa5.04□□□□□ -1.6
HDGFL3-205ENST00000568129 FAM168BA1KXE4 195 aa5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 ATP5LO75964 103 aa5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 PRSS2P07478 247 aa5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 CKS1BP61024 79 aa5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 LINC00469Q8N7U9 141 aa5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 PSORS1C2Q9UIG4 136 aa5.03□□□□□ -1.6
HDGFL3-205ENST00000568129 ZNF22P17026 224 aaPredicted RBP5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 KRTAP10-8P60410 259 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 GAGE2EQ4V326 116 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 SERTAD4-AS1Q5TG53 156 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 CBLN2Q8IUK8 224 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 SLC7A5P1Q8MH63 180 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 COX7B2Q8TF08 81 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 TOMM7Q9P0U1 55 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 GAGE2DQ9UEU5 116 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 PLA2G2DQ9UNK4 145 aa5.02□□□□□ -1.61
HDGFL3-205ENST00000568129 TRAV12-1A0A0B4J245 112 aa5.01□□□□□ -1.61
HDGFL3-205ENST00000568129 COLCA2A8K830 154 aa5.01□□□□□ -1.61
HDGFL3-205ENST00000568129 H3BRM9 83 aa5.01□□□□□ -1.61
HDGFL3-205ENST00000568129 PMCHL1Q16048 86 aa5.01□□□□□ -1.61
HDGFL3-205ENST00000568129 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
HDGFL3-205ENST00000568129 TRGC2P03986 189 aa5□□□□□ -1.61
HDGFL3-205ENST00000568129 SPINK8P0C7L1 97 aa5□□□□□ -1.61
HDGFL3-205ENST00000568129 LINC00310P59036 64 aa5□□□□□ -1.61
HDGFL3-205ENST00000568129 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
HDGFL3-205ENST00000568129 C11orf86A6NJI1 115 aa4.99□□□□□ -1.61
HDGFL3-205ENST00000568129 IGLV7-43P04211 117 aa4.99□□□□□ -1.61
HDGFL3-205ENST00000568129 FAM19A5Q7Z5A7 132 aaPredicted RBP4.99□□□□□ -1.61
HDGFL3-205ENST00000568129 BAGE3Q86Y29 109 aa4.99□□□□□ -1.61
HDGFL3-205ENST00000568129 IFI27L1Q96BM0 104 aa4.99□□□□□ -1.61
HDGFL3-205ENST00000568129 M0QXV9 152 aa4.98□□□□□ -1.61
HDGFL3-205ENST00000568129 COX17Q14061 63 aa4.98□□□□□ -1.61
HDGFL3-205ENST00000568129 C1orf137Q5JT78 98 aa4.98□□□□□ -1.61
HDGFL3-205ENST00000568129 SFTA2Q6UW10 78 aa4.98□□□□□ -1.61
HDGFL3-205ENST00000568129 REG3GQ6UW15 175 aa4.98□□□□□ -1.61
HDGFL3-205ENST00000568129 C22orf24Q9Y442 160 aa4.98□□□□□ -1.61
HDGFL3-205ENST00000568129 HMCN2Q8NDA2 5059 aa4.97□□□□□ -1.61
HDGFL3-205ENST00000568129 NDUFA6P56556 154 aa4.97□□□□□ -1.61
HDGFL3-205ENST00000568129 ZNF625Q96I27 306 aaPredicted RBP4.97□□□□□ -1.61
HDGFL3-205ENST00000568129 XAGE1AQ9HD64 81 aa4.97□□□□□ -1.61
HDGFL3-205ENST00000568129 CHTOPQ9Y3Y2 248 aaKnown RBP4.97□□□□□ -1.61
HDGFL3-205ENST00000568129 TMEM223A0PJW6 202 aa4.96□□□□□ -1.62
HDGFL3-205ENST00000568129 NUPR1O60356 82 aa4.96□□□□□ -1.62
HDGFL3-205ENST00000568129 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
HDGFL3-205ENST00000568129 FAM19A2Q8N3H0 131 aa4.96□□□□□ -1.62
HDGFL3-205ENST00000568129 H0Y9J4 135 aa4.95□□□□□ -1.62
HDGFL3-205ENST00000568129 HSBP1O75506 76 aa4.95□□□□□ -1.62
HDGFL3-205ENST00000568129 TMEM170BQ5T4T1 132 aa4.95□□□□□ -1.62
HDGFL3-205ENST00000568129 MRPL55Q7Z7F7 128 aaKnown RBP4.95□□□□□ -1.62
HDGFL3-205ENST00000568129 DIRC1Q969H9 104 aa4.95□□□□□ -1.62
HDGFL3-205ENST00000568129 ERG28Q9UKR5 140 aa4.95□□□□□ -1.62
HDGFL3-205ENST00000568129 ZNF861PO60384 105 aa4.94□□□□□ -1.62
HDGFL3-205ENST00000568129 SERF1AO75920 110 aa4.94□□□□□ -1.62
HDGFL3-205ENST00000568129 LEPROTL1O95214 131 aa4.94□□□□□ -1.62
HDGFL3-205ENST00000568129 KRTAP1-4P0C5Y4 121 aa4.94□□□□□ -1.62
HDGFL3-205ENST00000568129 LINC00167Q96N53 147 aa4.94□□□□□ -1.62
HDGFL3-205ENST00000568129 VPREB1P12018 145 aa4.93□□□□□ -1.62
HDGFL3-205ENST00000568129 UBE2BP63146 152 aa4.93□□□□□ -1.62
HDGFL3-205ENST00000568129 SND1-IT1Q9HBX3 110 aa4.93□□□□□ -1.62
HDGFL3-205ENST00000568129 BCE1O60756 84 aa4.92□□□□□ -1.62
HDGFL3-205ENST00000568129 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
HDGFL3-205ENST00000568129 HSPB8Q9UJY1 196 aa4.92□□□□□ -1.62
HDGFL3-205ENST00000568129 IGLV1-50A0A075B6I6 118 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 LOC107984156A0A0G2JMH3 177 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BKO60814 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BJP06899 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BOP23527 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BBP33778 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 PFN2P35080 140 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BDP58876 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST1H2BCP62807 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HERV-K104P63124 156 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST2H2BEQ16778 126 aa4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.91□□□□□ -1.62
HDGFL3-205ENST00000568129 ARL17AQ8IVW1 177 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms