RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 KRTAP7-1Q8IUC3 87 aa7.67□□□□□ -1.18
FANCA-229ENST00000567988 Q8IZM0 81 aa7.67□□□□□ -1.18
FANCA-229ENST00000567988 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
FANCA-229ENST00000567988 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
FANCA-229ENST00000567988 IGLC3P0DOY3 106 aa7.66□□□□□ -1.18
FANCA-229ENST00000567988 PMCHL1Q16048 86 aa7.66□□□□□ -1.18
FANCA-229ENST00000567988 RAB5BP61020 215 aa7.65□□□□□ -1.18
FANCA-229ENST00000567988 GAGE2BQ13066 116 aa7.65□□□□□ -1.18
FANCA-229ENST00000567988 CHCHD1Q96BP2 118 aaKnown RBP7.65□□□□□ -1.18
FANCA-229ENST00000567988 IGLV5-39A0A0G2JS06 123 aa7.64□□□□□ -1.19
FANCA-229ENST00000567988 TRGC2P03986 189 aa7.64□□□□□ -1.19
FANCA-229ENST00000567988 PRR3P79522 188 aaKnown RBP7.64□□□□□ -1.19
FANCA-229ENST00000567988 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
FANCA-229ENST00000567988 RPL18AQ02543 176 aaKnown RBP7.63□□□□□ -1.19
FANCA-229ENST00000567988 C9orf116Q5BN46 136 aaPredicted RBP7.63□□□□□ -1.19
FANCA-229ENST00000567988 LINC00469Q8N7U9 141 aa7.63□□□□□ -1.19
FANCA-229ENST00000567988 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
FANCA-229ENST00000567988 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
FANCA-229ENST00000567988 C9orf129Q5T035 196 aaKnown RBP7.62□□□□□ -1.19
FANCA-229ENST00000567988 DPH3Q96FX2 82 aa7.62□□□□□ -1.19
FANCA-229ENST00000567988 ATP5LO75964 103 aa7.61□□□□□ -1.19
FANCA-229ENST00000567988 ODF1Q14990 250 aa7.61□□□□□ -1.19
FANCA-229ENST00000567988 C7orf33Q8WU49 177 aa7.61□□□□□ -1.19
FANCA-229ENST00000567988 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
FANCA-229ENST00000567988 C11orf86A6NJI1 115 aa7.6□□□□□ -1.19
FANCA-229ENST00000567988 F8VRH5 84 aa7.6□□□□□ -1.19
FANCA-229ENST00000567988 CXCL5P42830 114 aa7.6□□□□□ -1.19
FANCA-229ENST00000567988 C6orf226Q5I0X4 101 aa7.6□□□□□ -1.19
FANCA-229ENST00000567988 TOMM7Q9P0U1 55 aa7.6□□□□□ -1.19
FANCA-229ENST00000567988 TRAV12-1A0A0B4J245 112 aa7.59□□□□□ -1.19
FANCA-229ENST00000567988 OXTP01178 125 aa7.59□□□□□ -1.19
FANCA-229ENST00000567988 PRSS2P07478 247 aa7.59□□□□□ -1.19
FANCA-229ENST00000567988 SPINK8P0C7L1 97 aa7.59□□□□□ -1.19
FANCA-229ENST00000567988 SRSF9Q13242 221 aaKnown RBP eCLIP7.59□□□□□ -1.19
FANCA-229ENST00000567988 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
FANCA-229ENST00000567988 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
FANCA-229ENST00000567988 PACRGQ96M98 296 aaPredicted RBP7.59□□□□□ -1.19
FANCA-229ENST00000567988 NUPR1O60356 82 aa7.58□□□□□ -1.2
FANCA-229ENST00000567988 SCO1O75880 301 aa7.58□□□□□ -1.2
FANCA-229ENST00000567988 SERF1AO75920 110 aa7.58□□□□□ -1.2
FANCA-229ENST00000567988 CKS1BP61024 79 aa7.58□□□□□ -1.2
FANCA-229ENST00000567988 PHF5AQ7RTV0 110 aaKnown RBP7.58□□□□□ -1.2
FANCA-229ENST00000567988 MT1HL1P0DM35 61 aa7.57□□□□□ -1.2
FANCA-229ENST00000567988 GAGE2EQ4V326 116 aa7.57□□□□□ -1.2
FANCA-229ENST00000567988 BAGE3Q86Y29 109 aa7.57□□□□□ -1.2
FANCA-229ENST00000567988 FAM19A2Q8N3H0 131 aa7.57□□□□□ -1.2
FANCA-229ENST00000567988 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
FANCA-229ENST00000567988 GAGE2DQ9UEU5 116 aa7.57□□□□□ -1.2
FANCA-229ENST00000567988 H3BRM9 83 aa7.56□□□□□ -1.2
FANCA-229ENST00000567988 PSORS1C2Q9UIG4 136 aa7.56□□□□□ -1.2
FANCA-229ENST00000567988 HSBP1O75506 76 aa7.55□□□□□ -1.2
FANCA-229ENST00000567988 SERTAD4-AS1Q5TG53 156 aa7.55□□□□□ -1.2
FANCA-229ENST00000567988 ZNF625Q96I27 306 aaPredicted RBP7.55□□□□□ -1.2
FANCA-229ENST00000567988 NDUFA6P56556 154 aa7.54□□□□□ -1.2
FANCA-229ENST00000567988 CHTOPQ9Y3Y2 248 aaKnown RBP7.54□□□□□ -1.2
FANCA-229ENST00000567988 TMEM223A0PJW6 202 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BKO60814 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BJP06899 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BOP23527 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BBP33778 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BDP58876 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BCP62807 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST2H2BEQ16778 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.53□□□□□ -1.2
FANCA-229ENST00000567988 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BHQ93079 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BNQ99877 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 HIST1H2BMQ99879 126 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 XAGE1AQ9HD64 81 aa7.53□□□□□ -1.2
FANCA-229ENST00000567988 M0QXV9 152 aa7.52□□□□□ -1.21
FANCA-229ENST00000567988 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
FANCA-229ENST00000567988 PLA2G2DQ9UNK4 145 aa7.52□□□□□ -1.21
FANCA-229ENST00000567988 IGLV5-37A0A075B6J1 123 aa7.51□□□□□ -1.21
FANCA-229ENST00000567988 LEPROTL1O95214 131 aa7.51□□□□□ -1.21
FANCA-229ENST00000567988 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
FANCA-229ENST00000567988 J3QL48 77 aa7.5□□□□□ -1.21
FANCA-229ENST00000567988 TMEM170BQ5T4T1 132 aa7.5□□□□□ -1.21
FANCA-229ENST00000567988 C22orf24Q9Y442 160 aa7.5□□□□□ -1.21
FANCA-229ENST00000567988 COA6Q5JTJ3 125 aaKnown RBP7.49□□□□□ -1.21
FANCA-229ENST00000567988 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
FANCA-229ENST00000567988 IGLV7-43P04211 117 aa7.48□□□□□ -1.21
FANCA-229ENST00000567988 COX17Q14061 63 aa7.48□□□□□ -1.21
FANCA-229ENST00000567988 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
FANCA-229ENST00000567988 Q8NDZ9 215 aa7.48□□□□□ -1.21
FANCA-229ENST00000567988 ERG28Q9UKR5 140 aa7.48□□□□□ -1.21
FANCA-229ENST00000567988 C1orf137Q5JT78 98 aa7.47□□□□□ -1.21
FANCA-229ENST00000567988 HSPB8Q9UJY1 196 aa7.47□□□□□ -1.21
FANCA-229ENST00000567988 TSPEAR-AS2P59090 65 aa7.46□□□□□ -1.22
FANCA-229ENST00000567988 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
FANCA-229ENST00000567988 VPREB1P12018 145 aa7.45□□□□□ -1.22
FANCA-229ENST00000567988 FABP4P15090 132 aa7.45□□□□□ -1.22
FANCA-229ENST00000567988 MRPL55Q7Z7F7 128 aaKnown RBP7.45□□□□□ -1.22
FANCA-229ENST00000567988 SND1-IT1Q9HBX3 110 aa7.45□□□□□ -1.22
FANCA-229ENST00000567988 PLNP26678 52 aa7.44□□□□□ -1.22
FANCA-229ENST00000567988 PFN2P35080 140 aa7.44□□□□□ -1.22
FANCA-229ENST00000567988 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
FANCA-229ENST00000567988 LRP2P98164 4655 aa7.43□□□□□ -1.22
FANCA-229ENST00000567988 DPM2O94777 84 aa7.43□□□□□ -1.22
FANCA-229ENST00000567988 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
FANCA-229ENST00000567988 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms