RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 C10orf25Q5T742 122 aa8.7□□□□□ -1.02
SPG7-215ENST00000566682 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
SPG7-215ENST00000566682 FAM19A2Q8N3H0 131 aa8.7□□□□□ -1.02
SPG7-215ENST00000566682 LINC00469Q8N7U9 141 aa8.7□□□□□ -1.02
SPG7-215ENST00000566682 PACRGQ96M98 296 aaPredicted RBP8.7□□□□□ -1.02
SPG7-215ENST00000566682 MRPL35Q9NZE8 188 aaKnown RBP8.7□□□□□ -1.02
SPG7-215ENST00000566682 PKIGQ9Y2B9 76 aa8.7□□□□□ -1.02
SPG7-215ENST00000566682 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
SPG7-215ENST00000566682 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
SPG7-215ENST00000566682 SERF1AO75920 110 aa8.69□□□□□ -1.02
SPG7-215ENST00000566682 LINC00310P59036 64 aa8.69□□□□□ -1.02
SPG7-215ENST00000566682 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
SPG7-215ENST00000566682 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
SPG7-215ENST00000566682 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
SPG7-215ENST00000566682 PRSS2P07478 247 aa8.68□□□□□ -1.02
SPG7-215ENST00000566682 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
SPG7-215ENST00000566682 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
SPG7-215ENST00000566682 C2orf82Q6UX34 121 aa8.68□□□□□ -1.02
SPG7-215ENST00000566682 Q8IZM0 81 aa8.68□□□□□ -1.02
SPG7-215ENST00000566682 C6orf48Q9UBA6 75 aa8.68□□□□□ -1.02
SPG7-215ENST00000566682 SMIM1B2RUZ4 78 aa8.67□□□□□ -1.02
SPG7-215ENST00000566682 NUPR1O60356 82 aa8.67□□□□□ -1.02
SPG7-215ENST00000566682 GAGE2BQ13066 116 aa8.67□□□□□ -1.02
SPG7-215ENST00000566682 IFI27L1Q96BM0 104 aa8.67□□□□□ -1.02
SPG7-215ENST00000566682 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
SPG7-215ENST00000566682 LINC00474Q9P2X8 69 aa8.67□□□□□ -1.02
SPG7-215ENST00000566682 PTTG1IPP53801 180 aa8.66□□□□□ -1.02
SPG7-215ENST00000566682 RPL18AQ02543 176 aaKnown RBP8.66□□□□□ -1.02
SPG7-215ENST00000566682 STPG4Q8N801 248 aa8.66□□□□□ -1.02
SPG7-215ENST00000566682 TRBV30A0A0K0K1B3 111 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BKO60814 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BJP06899 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BOP23527 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BBP33778 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 CKS1BP61024 79 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
SPG7-215ENST00000566682 LCE1DQ5T752 114 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
SPG7-215ENST00000566682 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
SPG7-215ENST00000566682 TRAV12-1A0A0B4J245 112 aa8.64□□□□□ -1.03
SPG7-215ENST00000566682 H3BRM9 83 aa8.64□□□□□ -1.03
SPG7-215ENST00000566682 LEPROTL1O95214 131 aa8.64□□□□□ -1.03
SPG7-215ENST00000566682 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
SPG7-215ENST00000566682 ZNF22P17026 224 aaPredicted RBP8.64□□□□□ -1.03
SPG7-215ENST00000566682 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
SPG7-215ENST00000566682 FAT1Q14517 4588 aa8.63□□□□□ -1.03
SPG7-215ENST00000566682 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
SPG7-215ENST00000566682 C9orf116Q5BN46 136 aaPredicted RBP8.63□□□□□ -1.03
SPG7-215ENST00000566682 Q6ZRP5 223 aa8.63□□□□□ -1.03
SPG7-215ENST00000566682 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
SPG7-215ENST00000566682 CXCL5P42830 114 aa8.62□□□□□ -1.03
SPG7-215ENST00000566682 A0A1W2PNN7 141 aa8.61□□□□□ -1.03
SPG7-215ENST00000566682 F8VRH5 84 aa8.61□□□□□ -1.03
SPG7-215ENST00000566682 FABP4P15090 132 aa8.61□□□□□ -1.03
SPG7-215ENST00000566682 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
SPG7-215ENST00000566682 TMEM170BQ5T4T1 132 aa8.61□□□□□ -1.03
SPG7-215ENST00000566682 KRTAP4-7Q9BYR0 210 aa8.61□□□□□ -1.03
SPG7-215ENST00000566682 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
SPG7-215ENST00000566682 IGLV5-39A0A0G2JS06 123 aa8.6□□□□□ -1.03
SPG7-215ENST00000566682 NDUFC2-KCTD14E9PQ53 114 aa8.6□□□□□ -1.03
SPG7-215ENST00000566682 H0Y8G0 127 aa8.6□□□□□ -1.03
SPG7-215ENST00000566682 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
SPG7-215ENST00000566682 RPL37AP61513 92 aaKnown RBP8.6□□□□□ -1.03
SPG7-215ENST00000566682 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
SPG7-215ENST00000566682 ODF1Q14990 250 aa8.58□□□□□ -1.04
SPG7-215ENST00000566682 C7orf33Q8WU49 177 aa8.58□□□□□ -1.04
SPG7-215ENST00000566682 TMEM223A0PJW6 202 aa8.56□□□□□ -1.04
SPG7-215ENST00000566682 FAM168BA1KXE4 195 aa8.56□□□□□ -1.04
SPG7-215ENST00000566682 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
SPG7-215ENST00000566682 MAP1LC3CQ9BXW4 147 aa8.55□□□□□ -1.04
SPG7-215ENST00000566682 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
SPG7-215ENST00000566682 SRRM2Q9UQ35 2752 aaKnown RBP8.55□□□□□ -1.04
SPG7-215ENST00000566682 VPS13BQ7Z7G8 4022 aa8.54□□□□□ -1.04
SPG7-215ENST00000566682 COA6Q5JTJ3 125 aaKnown RBP8.54□□□□□ -1.04
SPG7-215ENST00000566682 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
SPG7-215ENST00000566682 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
SPG7-215ENST00000566682 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
SPG7-215ENST00000566682 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
SPG7-215ENST00000566682 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
SPG7-215ENST00000566682 PMCHL2Q9BQD1 86 aa8.52□□□□□ -1.05
SPG7-215ENST00000566682 PCLOQ9Y6V0 5065 aa8.51□□□□□ -1.05
SPG7-215ENST00000566682 DPM2O94777 84 aa8.51□□□□□ -1.05
SPG7-215ENST00000566682 PLNP26678 52 aa8.51□□□□□ -1.05
SPG7-215ENST00000566682 PFN2P35080 140 aa8.51□□□□□ -1.05
SPG7-215ENST00000566682 ZNF625Q96I27 306 aaPredicted RBP8.51□□□□□ -1.05
SPG7-215ENST00000566682 LOC105371267A0A1B0GV96 52 aa8.5□□□□□ -1.05
SPG7-215ENST00000566682 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
SPG7-215ENST00000566682 IGKCP01834 107 aa8.5□□□□□ -1.05
SPG7-215ENST00000566682 PRR3P79522 188 aaKnown RBP8.5□□□□□ -1.05
SPG7-215ENST00000566682 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
SPG7-215ENST00000566682 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
SPG7-215ENST00000566682 M0QXV9 152 aa8.49□□□□□ -1.05
SPG7-215ENST00000566682 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms