RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
COMMD4-214ENST00000566230 GEMIN7Q9H840 131 aaKnown RBP8.3□□□□□ -1.08
COMMD4-214ENST00000566230 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
COMMD4-214ENST00000566230 SPAG11BQ08648 103 aa8.29□□□□□ -1.08
COMMD4-214ENST00000566230 A0A096LNJ9 63 aa8.28□□□□□ -1.08
COMMD4-214ENST00000566230 TINCRA0A1B0GVN0 87 aa8.28□□□□□ -1.08
COMMD4-214ENST00000566230 ATP5LO75964 103 aa8.28□□□□□ -1.08
COMMD4-214ENST00000566230 PDZD11Q5EBL8 140 aa8.28□□□□□ -1.08
COMMD4-214ENST00000566230 MRPL35Q9NZE8 188 aaKnown RBP8.28□□□□□ -1.08
COMMD4-214ENST00000566230 LOC107984640A0A0U1RRK4 108 aa8.27□□□□□ -1.09
COMMD4-214ENST00000566230 NDUFA1O15239 70 aa8.27□□□□□ -1.09
COMMD4-214ENST00000566230 KIAA0087Q14695 138 aa8.27□□□□□ -1.09
COMMD4-214ENST00000566230 BAGE3Q86Y29 109 aa8.27□□□□□ -1.09
COMMD4-214ENST00000566230 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
COMMD4-214ENST00000566230 PACRGQ96M98 296 aaPredicted RBP8.26□□□□□ -1.09
COMMD4-214ENST00000566230 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
COMMD4-214ENST00000566230 PRSS2P07478 247 aa8.25□□□□□ -1.09
COMMD4-214ENST00000566230 NDUFA6P56556 154 aa8.25□□□□□ -1.09
COMMD4-214ENST00000566230 PMCHL1Q16048 86 aa8.25□□□□□ -1.09
COMMD4-214ENST00000566230 C6orf226Q5I0X4 101 aa8.25□□□□□ -1.09
COMMD4-214ENST00000566230 HSBP1O75506 76 aa8.24□□□□□ -1.09
COMMD4-214ENST00000566230 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
COMMD4-214ENST00000566230 Q6ZRP5 223 aa8.24□□□□□ -1.09
COMMD4-214ENST00000566230 Q8IZM0 81 aa8.24□□□□□ -1.09
COMMD4-214ENST00000566230 LINC00469Q8N7U9 141 aa8.24□□□□□ -1.09
COMMD4-214ENST00000566230 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
COMMD4-214ENST00000566230 TLX1NBP0CAT3 122 aa8.23□□□□□ -1.09
COMMD4-214ENST00000566230 PTTG1IPP53801 180 aa8.23□□□□□ -1.09
COMMD4-214ENST00000566230 CKS1BP61024 79 aa8.23□□□□□ -1.09
COMMD4-214ENST00000566230 H3BRM9 83 aa8.22□□□□□ -1.09
COMMD4-214ENST00000566230 IGLC3P0DOY3 106 aa8.22□□□□□ -1.09
COMMD4-214ENST00000566230 GAGE2BQ13066 116 aa8.22□□□□□ -1.09
COMMD4-214ENST00000566230 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
COMMD4-214ENST00000566230 TOMM7Q9P0U1 55 aa8.22□□□□□ -1.09
COMMD4-214ENST00000566230 SCO1O75880 301 aa8.21□□□□□ -1.1
COMMD4-214ENST00000566230 IFI27L1Q96BM0 104 aa8.21□□□□□ -1.1
COMMD4-214ENST00000566230 C6orf48Q9UBA6 75 aa8.21□□□□□ -1.1
COMMD4-214ENST00000566230 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
COMMD4-214ENST00000566230 CXCL5P42830 114 aa8.2□□□□□ -1.1
COMMD4-214ENST00000566230 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
COMMD4-214ENST00000566230 FAM19A2Q8N3H0 131 aa8.2□□□□□ -1.1
COMMD4-214ENST00000566230 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
COMMD4-214ENST00000566230 SERF1AO75920 110 aa8.19□□□□□ -1.1
COMMD4-214ENST00000566230 S100A1P23297 94 aa8.19□□□□□ -1.1
COMMD4-214ENST00000566230 CHTOPQ9Y3Y2 248 aaKnown RBP8.19□□□□□ -1.1
COMMD4-214ENST00000566230 F8VRH5 84 aa8.18□□□□□ -1.1
COMMD4-214ENST00000566230 LEPROTL1O95214 131 aa8.18□□□□□ -1.1
COMMD4-214ENST00000566230 RPL18AQ02543 176 aaKnown RBP8.18□□□□□ -1.1
COMMD4-214ENST00000566230 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
COMMD4-214ENST00000566230 MUC2Q02817 5179 aa8.17□□□□□ -1.1
COMMD4-214ENST00000566230 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
COMMD4-214ENST00000566230 NDUFC2-KCTD14E9PQ53 114 aa8.17□□□□□ -1.1
COMMD4-214ENST00000566230 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
COMMD4-214ENST00000566230 NUPR1O60356 82 aa8.16□□□□□ -1.1
COMMD4-214ENST00000566230 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
COMMD4-214ENST00000566230 LINC00310P59036 64 aa8.16□□□□□ -1.1
COMMD4-214ENST00000566230 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
COMMD4-214ENST00000566230 HSPB8Q9UJY1 196 aa8.16□□□□□ -1.1
COMMD4-214ENST00000566230 IGLV5-39A0A0G2JS06 123 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 C11orf86A6NJI1 115 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BKO60814 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BJP06899 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BOP23527 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BBP33778 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BDP58876 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BCP62807 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST2H2BEQ16778 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 GAGE2EQ4V326 116 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 C9orf116Q5BN46 136 aaPredicted RBP8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.15□□□□□ -1.1
COMMD4-214ENST00000566230 TMEM170BQ5T4T1 132 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BHQ93079 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BNQ99877 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 HIST1H2BMQ99879 126 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 GAGE2DQ9UEU5 116 aa8.15□□□□□ -1.1
COMMD4-214ENST00000566230 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
COMMD4-214ENST00000566230 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
COMMD4-214ENST00000566230 SFTA2Q6UW10 78 aa8.13□□□□□ -1.11
COMMD4-214ENST00000566230 FABP4P15090 132 aa8.12□□□□□ -1.11
COMMD4-214ENST00000566230 C1orf137Q5JT78 98 aa8.11□□□□□ -1.11
COMMD4-214ENST00000566230 MAP1LC3CQ9BXW4 147 aa8.11□□□□□ -1.11
COMMD4-214ENST00000566230 TMEM223A0PJW6 202 aa8.1□□□□□ -1.11
COMMD4-214ENST00000566230 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
COMMD4-214ENST00000566230 COX17Q14061 63 aa8.09□□□□□ -1.11
COMMD4-214ENST00000566230 COA6Q5JTJ3 125 aaKnown RBP8.09□□□□□ -1.11
COMMD4-214ENST00000566230 C9orf129Q5T035 196 aaKnown RBP8.09□□□□□ -1.11
COMMD4-214ENST00000566230 H0Y8G0 127 aa8.08□□□□□ -1.12
COMMD4-214ENST00000566230 ATP6V1G1O75348 118 aa8.08□□□□□ -1.12
COMMD4-214ENST00000566230 IGLV7-43P04211 117 aa8.08□□□□□ -1.12
COMMD4-214ENST00000566230 PLNP26678 52 aa8.08□□□□□ -1.12
COMMD4-214ENST00000566230 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
COMMD4-214ENST00000566230 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
COMMD4-214ENST00000566230 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
COMMD4-214ENST00000566230 DPM2O94777 84 aa8.06□□□□□ -1.12
COMMD4-214ENST00000566230 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
COMMD4-214ENST00000566230 FAT4Q6V0I7 4981 aa8.05□□□□□ -1.12
COMMD4-214ENST00000566230 H0Y9J4 135 aa8.05□□□□□ -1.12
COMMD4-214ENST00000566230 IGKCP01834 107 aa8.05□□□□□ -1.12
COMMD4-214ENST00000566230 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
COMMD4-214ENST00000566230 PFN2P35080 140 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms