RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 F8VRH5 84 aa10.37□□□□□ -0.75
USB1-211ENST00000565662 SNAPINO95295 136 aa10.37□□□□□ -0.75
USB1-211ENST00000565662 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
USB1-211ENST00000565662 TOMM7Q9P0U1 55 aa10.37□□□□□ -0.75
USB1-211ENST00000565662 RAB5BP61020 215 aa10.36□□□□□ -0.75
USB1-211ENST00000565662 GAGE2EQ4V326 116 aa10.36□□□□□ -0.75
USB1-211ENST00000565662 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
USB1-211ENST00000565662 LINC00469Q8N7U9 141 aa10.36□□□□□ -0.75
USB1-211ENST00000565662 GAGE2DQ9UEU5 116 aa10.36□□□□□ -0.75
USB1-211ENST00000565662 PSORS1C2Q9UIG4 136 aa10.36□□□□□ -0.75
USB1-211ENST00000565662 H3BRM9 83 aa10.35□□□□□ -0.75
USB1-211ENST00000565662 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
USB1-211ENST00000565662 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
USB1-211ENST00000565662 PMVKQ15126 192 aa10.35□□□□□ -0.75
USB1-211ENST00000565662 CDKN2A-AS1Q9UH64 79 aa10.35□□□□□ -0.75
USB1-211ENST00000565662 IGLV5-45A0A087WSX0 123 aa10.34□□□□□ -0.75
USB1-211ENST00000565662 M0QXV9 152 aa10.34□□□□□ -0.75
USB1-211ENST00000565662 C1orf137Q5JT78 98 aa10.34□□□□□ -0.75
USB1-211ENST00000565662 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
USB1-211ENST00000565662 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
USB1-211ENST00000565662 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
USB1-211ENST00000565662 FAM19A5Q7Z5A7 132 aaPredicted RBP10.33□□□□□ -0.76
USB1-211ENST00000565662 UBE2BP63146 152 aa10.32□□□□□ -0.76
USB1-211ENST00000565662 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
USB1-211ENST00000565662 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
USB1-211ENST00000565662 TRAPPC1Q9Y5R8 145 aa10.32□□□□□ -0.76
USB1-211ENST00000565662 APOC3P02656 99 aa10.31□□□□□ -0.76
USB1-211ENST00000565662 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
USB1-211ENST00000565662 CST9LQ9H4G1 147 aa10.31□□□□□ -0.76
USB1-211ENST00000565662 SMIM1B2RUZ4 78 aa10.3□□□□□ -0.76
USB1-211ENST00000565662 HBDP02042 147 aa10.3□□□□□ -0.76
USB1-211ENST00000565662 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
USB1-211ENST00000565662 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
USB1-211ENST00000565662 NUPR1O60356 82 aa10.29□□□□□ -0.76
USB1-211ENST00000565662 ATP5LO75964 103 aa10.29□□□□□ -0.76
USB1-211ENST00000565662 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
USB1-211ENST00000565662 LINC00614P0C842 121 aa10.29□□□□□ -0.76
USB1-211ENST00000565662 C9orf129Q5T035 196 aaKnown RBP10.27□□□□□ -0.77
USB1-211ENST00000565662 C18orf32Q8TCD1 76 aa10.27□□□□□ -0.77
USB1-211ENST00000565662 FAM168BA1KXE4 195 aa10.26□□□□□ -0.77
USB1-211ENST00000565662 IGLC3P0DOY3 106 aa10.26□□□□□ -0.77
USB1-211ENST00000565662 H0Y9J4 135 aa10.25□□□□□ -0.77
USB1-211ENST00000565662 KRTAP10-8P60410 259 aa10.23□□□□□ -0.77
USB1-211ENST00000565662 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
USB1-211ENST00000565662 IGLV1-50A0A075B6I6 118 aa10.22□□□□□ -0.77
USB1-211ENST00000565662 COX17Q14061 63 aa10.22□□□□□ -0.77
USB1-211ENST00000565662 MRPL55Q7Z7F7 128 aaKnown RBP10.22□□□□□ -0.77
USB1-211ENST00000565662 SPINK8P0C7L1 97 aa10.21□□□□□ -0.77
USB1-211ENST00000565662 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
USB1-211ENST00000565662 NDUFA6P56556 154 aa10.21□□□□□ -0.77
USB1-211ENST00000565662 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
USB1-211ENST00000565662 A0A096LNJ9 63 aa10.2□□□□□ -0.78
USB1-211ENST00000565662 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
USB1-211ENST00000565662 XAGE1AQ9HD64 81 aa10.2□□□□□ -0.78
USB1-211ENST00000565662 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
USB1-211ENST00000565662 IGLV5-37A0A075B6J1 123 aa10.18□□□□□ -0.78
USB1-211ENST00000565662 ZNF861PO60384 105 aa10.18□□□□□ -0.78
USB1-211ENST00000565662 ZNF22P17026 224 aaPredicted RBP10.18□□□□□ -0.78
USB1-211ENST00000565662 RPL28P46779 137 aaKnown RBP10.18□□□□□ -0.78
USB1-211ENST00000565662 KRTAP7-1Q8IUC3 87 aa10.18□□□□□ -0.78
USB1-211ENST00000565662 HMCN2Q8NDA2 5059 aa10.17□□□□□ -0.78
USB1-211ENST00000565662 TRAV12-1A0A0B4J245 112 aa10.17□□□□□ -0.78
USB1-211ENST00000565662 BAGE3Q86Y29 109 aa10.17□□□□□ -0.78
USB1-211ENST00000565662 URB1-AS1Q96HZ7 61 aa10.17□□□□□ -0.78
USB1-211ENST00000565662 TMEM170BQ5T4T1 132 aa10.16□□□□□ -0.78
USB1-211ENST00000565662 TNXBP22105 4242 aa10.16□□□□□ -0.78
USB1-211ENST00000565662 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
USB1-211ENST00000565662 BCE1O60756 84 aa10.14□□□□□ -0.79
USB1-211ENST00000565662 HSBP1O75506 76 aa10.14□□□□□ -0.79
USB1-211ENST00000565662 YPEL4Q96NS1 127 aa10.14□□□□□ -0.79
USB1-211ENST00000565662 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
USB1-211ENST00000565662 CHTOPQ9Y3Y2 248 aaKnown RBP10.14□□□□□ -0.79
USB1-211ENST00000565662 LINC00587B1AMM8 73 aa10.13□□□□□ -0.79
USB1-211ENST00000565662 IFI27L1Q96BM0 104 aa10.13□□□□□ -0.79
USB1-211ENST00000565662 PMCHL1Q16048 86 aa10.12□□□□□ -0.79
USB1-211ENST00000565662 KRTAP11-1Q8IUC1 163 aa10.12□□□□□ -0.79
USB1-211ENST00000565662 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
USB1-211ENST00000565662 PFN2P35080 140 aa10.1□□□□□ -0.79
USB1-211ENST00000565662 LINC00167Q96N53 147 aa10.1□□□□□ -0.79
USB1-211ENST00000565662 KRTAP1-4P0C5Y4 121 aa10.08□□□□□ -0.8
USB1-211ENST00000565662 HERV-K104P63124 156 aa10.08□□□□□ -0.8
USB1-211ENST00000565662 PRR26Q8N8Z3 221 aa10.08□□□□□ -0.8
USB1-211ENST00000565662 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
USB1-211ENST00000565662 SND1-IT1Q9HBX3 110 aa10.07□□□□□ -0.8
USB1-211ENST00000565662 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
USB1-211ENST00000565662 UBE2AP49459 152 aa10.06□□□□□ -0.8
USB1-211ENST00000565662 CBLN2Q8IUK8 224 aa10.06□□□□□ -0.8
USB1-211ENST00000565662 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
USB1-211ENST00000565662 ATP6V1G1O75348 118 aa10.05□□□□□ -0.8
USB1-211ENST00000565662 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
USB1-211ENST00000565662 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
USB1-211ENST00000565662 RPL37AP8A6NKH3 93 aa10.04□□□□□ -0.8
USB1-211ENST00000565662 VPREB1P12018 145 aa10.04□□□□□ -0.8
USB1-211ENST00000565662 PLNP26678 52 aa10.04□□□□□ -0.8
USB1-211ENST00000565662 GAGE10A6NGK3 116 aa10.02□□□□□ -0.81
USB1-211ENST00000565662 TRGC2P03986 189 aa10.02□□□□□ -0.81
USB1-211ENST00000565662 CRYGAP11844 174 aa10.02□□□□□ -0.81
USB1-211ENST00000565662 LINC00158P58513 81 aa10.02□□□□□ -0.81
USB1-211ENST00000565662 HERVK_113P61574 105 aa10.02□□□□□ -0.81
USB1-211ENST00000565662 S100A12P80511 92 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms