RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
SNX29-203ENST00000564111 SVBPQ8N300 66 aa9.2□□□□□ -0.94
SNX29-203ENST00000564111 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
SNX29-203ENST00000564111 RAB5BP61020 215 aa9.19□□□□□ -0.94
SNX29-203ENST00000564111 C10orf25Q5T742 122 aa9.19□□□□□ -0.94
SNX29-203ENST00000564111 H3BRM9 83 aa9.19□□□□□ -0.94
SNX29-203ENST00000564111 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
SNX29-203ENST00000564111 F8VRH5 84 aa9.18□□□□□ -0.94
SNX29-203ENST00000564111 PMVKQ15126 192 aa9.18□□□□□ -0.94
SNX29-203ENST00000564111 LINC00469Q8N7U9 141 aa9.18□□□□□ -0.94
SNX29-203ENST00000564111 TOMM7Q9P0U1 55 aa9.18□□□□□ -0.94
SNX29-203ENST00000564111 SRSF9Q13242 221 aaKnown RBP eCLIP9.17□□□□□ -0.94
SNX29-203ENST00000564111 PLA2G2DQ9UNK4 145 aa9.17□□□□□ -0.94
SNX29-203ENST00000564111 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
SNX29-203ENST00000564111 MT1HL1P0DM35 61 aa9.16□□□□□ -0.94
SNX29-203ENST00000564111 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
SNX29-203ENST00000564111 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
SNX29-203ENST00000564111 CDKN2A-AS1Q9UH64 79 aa9.16□□□□□ -0.94
SNX29-203ENST00000564111 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
SNX29-203ENST00000564111 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
SNX29-203ENST00000564111 PHF5AQ7RTV0 110 aaKnown RBP9.16□□□□□ -0.94
SNX29-203ENST00000564111 CST9LQ9H4G1 147 aa9.16□□□□□ -0.94
SNX29-203ENST00000564111 M0QXV9 152 aa9.15□□□□□ -0.94
SNX29-203ENST00000564111 LBHQ53QV2 105 aaPredicted RBP9.15□□□□□ -0.94
SNX29-203ENST00000564111 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.94
SNX29-203ENST00000564111 DIRC1Q969H9 104 aa9.15□□□□□ -0.94
SNX29-203ENST00000564111 C1orf137Q5JT78 98 aa9.15□□□□□ -0.95
SNX29-203ENST00000564111 C2orf82Q6UX34 121 aa9.15□□□□□ -0.95
SNX29-203ENST00000564111 APOC3P02656 99 aa9.14□□□□□ -0.95
SNX29-203ENST00000564111 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
SNX29-203ENST00000564111 ATP5LO75964 103 aa9.13□□□□□ -0.95
SNX29-203ENST00000564111 HBDP02042 147 aa9.13□□□□□ -0.95
SNX29-203ENST00000564111 UBE2BP63146 152 aa9.13□□□□□ -0.95
SNX29-203ENST00000564111 SMIM1B2RUZ4 78 aa9.13□□□□□ -0.95
SNX29-203ENST00000564111 NUPR1O60356 82 aa9.13□□□□□ -0.95
SNX29-203ENST00000564111 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
SNX29-203ENST00000564111 TP73-AS1Q9UF72 201 aa9.13□□□□□ -0.95
SNX29-203ENST00000564111 IGLV7-43P04211 117 aa9.12□□□□□ -0.95
SNX29-203ENST00000564111 LINC00614P0C842 121 aa9.12□□□□□ -0.95
SNX29-203ENST00000564111 IGLC3P0DOY3 106 aa9.12□□□□□ -0.95
SNX29-203ENST00000564111 C18orf32Q8TCD1 76 aa9.11□□□□□ -0.95
SNX29-203ENST00000564111 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
SNX29-203ENST00000564111 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
SNX29-203ENST00000564111 LRP1Q07954 4544 aaKnown RBP9.09□□□□□ -0.95
SNX29-203ENST00000564111 CHCHD1Q96BP2 118 aaKnown RBP9.08□□□□□ -0.96
SNX29-203ENST00000564111 H0Y9J4 135 aa9.08□□□□□ -0.96
SNX29-203ENST00000564111 KRTAP10-8P60410 259 aa9.07□□□□□ -0.96
SNX29-203ENST00000564111 SPINK8P0C7L1 97 aa9.07□□□□□ -0.96
SNX29-203ENST00000564111 NDUFA6P56556 154 aa9.07□□□□□ -0.96
SNX29-203ENST00000564111 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
SNX29-203ENST00000564111 IGLV5-39A0A0G2JS06 123 aa9.05□□□□□ -0.96
SNX29-203ENST00000564111 IGLV1-50A0A075B6I6 118 aa9.05□□□□□ -0.96
SNX29-203ENST00000564111 IGLV5-37A0A075B6J1 123 aa9.05□□□□□ -0.96
SNX29-203ENST00000564111 C22orf24Q9Y442 160 aa9.05□□□□□ -0.96
SNX29-203ENST00000564111 A0A096LNJ9 63 aa9.04□□□□□ -0.96
SNX29-203ENST00000564111 SCO1O75880 301 aa9.04□□□□□ -0.96
SNX29-203ENST00000564111 COX17Q14061 63 aa9.04□□□□□ -0.96
SNX29-203ENST00000564111 MRPL55Q7Z7F7 128 aaKnown RBP9.04□□□□□ -0.96
SNX29-203ENST00000564111 KRTAP7-1Q8IUC3 87 aa9.04□□□□□ -0.96
SNX29-203ENST00000564111 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
SNX29-203ENST00000564111 ZNF22P17026 224 aaPredicted RBP9.03□□□□□ -0.96
SNX29-203ENST00000564111 RPL13AP40429 203 aaKnown RBP9.03□□□□□ -0.96
SNX29-203ENST00000564111 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
SNX29-203ENST00000564111 YPEL4Q96NS1 127 aa9.03□□□□□ -0.96
SNX29-203ENST00000564111 TRAV12-1A0A0B4J245 112 aa9.03□□□□□ -0.96
SNX29-203ENST00000564111 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
SNX29-203ENST00000564111 XAGE1AQ9HD64 81 aa9.03□□□□□ -0.96
SNX29-203ENST00000564111 RPL28P46779 137 aaKnown RBP9.01□□□□□ -0.97
SNX29-203ENST00000564111 BAGE3Q86Y29 109 aa9.01□□□□□ -0.97
SNX29-203ENST00000564111 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
SNX29-203ENST00000564111 ZNF861PO60384 105 aa9□□□□□ -0.97
SNX29-203ENST00000564111 HMCN2Q8NDA2 5059 aa9□□□□□ -0.97
SNX29-203ENST00000564111 BCE1O60756 84 aa8.99□□□□□ -0.97
SNX29-203ENST00000564111 RPL24P83731 157 aaKnown RBP8.99□□□□□ -0.97
SNX29-203ENST00000564111 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
SNX29-203ENST00000564111 IFI27L1Q96BM0 104 aa8.99□□□□□ -0.97
SNX29-203ENST00000564111 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
SNX29-203ENST00000564111 KRTAP11-1Q8IUC1 163 aa8.99□□□□□ -0.97
SNX29-203ENST00000564111 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
SNX29-203ENST00000564111 HSBP1O75506 76 aa8.98□□□□□ -0.97
SNX29-203ENST00000564111 PMCHL1Q16048 86 aa8.98□□□□□ -0.97
SNX29-203ENST00000564111 TNXBP22105 4242 aa8.97□□□□□ -0.97
SNX29-203ENST00000564111 LINC00587B1AMM8 73 aa8.96□□□□□ -0.97
SNX29-203ENST00000564111 LINC00167Q96N53 147 aa8.96□□□□□ -0.98
SNX29-203ENST00000564111 TMEM223A0PJW6 202 aa8.94□□□□□ -0.98
SNX29-203ENST00000564111 PFN2P35080 140 aa8.94□□□□□ -0.98
SNX29-203ENST00000564111 HERV-K104P63124 156 aa8.94□□□□□ -0.98
SNX29-203ENST00000564111 CBLN2Q8IUK8 224 aa8.94□□□□□ -0.98
SNX29-203ENST00000564111 ZNF625Q96I27 306 aaPredicted RBP8.93□□□□□ -0.98
SNX29-203ENST00000564111 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
SNX29-203ENST00000564111 PRR26Q8N8Z3 221 aa8.92□□□□□ -0.98
SNX29-203ENST00000564111 HSPB8Q9UJY1 196 aa8.92□□□□□ -0.98
SNX29-203ENST00000564111 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
SNX29-203ENST00000564111 UBE2AP49459 152 aa8.92□□□□□ -0.98
SNX29-203ENST00000564111 MAP1LC3CQ9BXW4 147 aa8.91□□□□□ -0.98
SNX29-203ENST00000564111 VPREB1P12018 145 aa8.9□□□□□ -0.98
SNX29-203ENST00000564111 PLNP26678 52 aa8.9□□□□□ -0.98
SNX29-203ENST00000564111 LEPROTL1O95214 131 aa8.89□□□□□ -0.99
SNX29-203ENST00000564111 TRGC2P03986 189 aa8.89□□□□□ -0.99
SNX29-203ENST00000564111 LINC00158P58513 81 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms