RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
TRADD-203ENST00000563348 TINCRA0A1B0GVN0 87 aa11.78□□□□□ -0.52
TRADD-203ENST00000563348 CKS1BP61024 79 aa11.78□□□□□ -0.52
TRADD-203ENST00000563348 C18orf32Q8TCD1 76 aa11.78□□□□□ -0.52
TRADD-203ENST00000563348 NDUFC2-KCTD14E9PQ53 114 aa11.77□□□□□ -0.53
TRADD-203ENST00000563348 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRADD-203ENST00000563348 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.53
TRADD-203ENST00000563348 URB1-AS1Q96HZ7 61 aa11.77□□□□□ -0.53
TRADD-203ENST00000563348 LINC00614P0C842 121 aa11.76□□□□□ -0.53
TRADD-203ENST00000563348 MT1HL1P0DM35 61 aa11.76□□□□□ -0.53
TRADD-203ENST00000563348 PMVKQ15126 192 aa11.76□□□□□ -0.53
TRADD-203ENST00000563348 SPINK6Q6UWN8 80 aa11.76□□□□□ -0.53
TRADD-203ENST00000563348 LINC00469Q8N7U9 141 aa11.76□□□□□ -0.53
TRADD-203ENST00000563348 IGLV5-45A0A087WSX0 123 aa11.75□□□□□ -0.53
TRADD-203ENST00000563348 FAM168BA1KXE4 195 aa11.75□□□□□ -0.53
TRADD-203ENST00000563348 A0A096LNJ9 63 aa11.74□□□□□ -0.53
TRADD-203ENST00000563348 SERTAD4-AS1Q5TG53 156 aa11.74□□□□□ -0.53
TRADD-203ENST00000563348 YPEL4Q96NS1 127 aa11.74□□□□□ -0.53
TRADD-203ENST00000563348 PSORS1C2Q9UIG4 136 aa11.74□□□□□ -0.53
TRADD-203ENST00000563348 SMIM1B2RUZ4 78 aa11.73□□□□□ -0.53
TRADD-203ENST00000563348 PDZD11Q5EBL8 140 aa11.73□□□□□ -0.53
TRADD-203ENST00000563348 RAB5BP61020 215 aa11.72□□□□□ -0.53
TRADD-203ENST00000563348 C9orf129Q5T035 196 aaKnown RBP11.72□□□□□ -0.53
TRADD-203ENST00000563348 KRTAP7-1Q8IUC3 87 aa11.72□□□□□ -0.53
TRADD-203ENST00000563348 TNXBP22105 4242 aa11.71□□□□□ -0.53
TRADD-203ENST00000563348 F8VRH5 84 aa11.71□□□□□ -0.53
TRADD-203ENST00000563348 HBDP02042 147 aa11.71□□□□□ -0.53
TRADD-203ENST00000563348 CXCL5P42830 114 aa11.71□□□□□ -0.53
TRADD-203ENST00000563348 FAM19A5Q7Z5A7 132 aaPredicted RBP11.71□□□□□ -0.53
TRADD-203ENST00000563348 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
TRADD-203ENST00000563348 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
TRADD-203ENST00000563348 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
TRADD-203ENST00000563348 HMCN2Q8NDA2 5059 aa11.68□□□□□ -0.54
TRADD-203ENST00000563348 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
TRADD-203ENST00000563348 NDUFA6P56556 154 aa11.68□□□□□ -0.54
TRADD-203ENST00000563348 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
TRADD-203ENST00000563348 REG3GQ6UW15 175 aa11.68□□□□□ -0.54
TRADD-203ENST00000563348 KRTAP11-1Q8IUC1 163 aa11.68□□□□□ -0.54
TRADD-203ENST00000563348 H3BRM9 83 aa11.67□□□□□ -0.54
TRADD-203ENST00000563348 IGLC3P0DOY3 106 aa11.67□□□□□ -0.54
TRADD-203ENST00000563348 M0QXV9 152 aa11.66□□□□□ -0.54
TRADD-203ENST00000563348 ATP5LO75964 103 aa11.66□□□□□ -0.54
TRADD-203ENST00000563348 XAGE1AQ9HD64 81 aa11.65□□□□□ -0.54
TRADD-203ENST00000563348 CBLN2Q8IUK8 224 aa11.64□□□□□ -0.55
TRADD-203ENST00000563348 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
TRADD-203ENST00000563348 UBE2BP63146 152 aa11.63□□□□□ -0.55
TRADD-203ENST00000563348 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
TRADD-203ENST00000563348 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
TRADD-203ENST00000563348 IGLV5-39A0A0G2JS06 123 aa11.62□□□□□ -0.55
TRADD-203ENST00000563348 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
TRADD-203ENST00000563348 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
TRADD-203ENST00000563348 SLC7A5P1Q8MH63 180 aa11.62□□□□□ -0.55
TRADD-203ENST00000563348 C22orf24Q9Y442 160 aa11.62□□□□□ -0.55
TRADD-203ENST00000563348 ODF1Q14990 250 aa11.61□□□□□ -0.55
TRADD-203ENST00000563348 LBHQ53QV2 105 aaPredicted RBP11.59□□□□□ -0.55
TRADD-203ENST00000563348 PLA2G2DQ9UNK4 145 aa11.59□□□□□ -0.55
TRADD-203ENST00000563348 C11orf86A6NJI1 115 aa11.58□□□□□ -0.56
TRADD-203ENST00000563348 DIRC1Q969H9 104 aa11.58□□□□□ -0.56
TRADD-203ENST00000563348 TP73-AS1Q9UF72 201 aa11.57□□□□□ -0.56
TRADD-203ENST00000563348 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
TRADD-203ENST00000563348 TRGC2P03986 189 aa11.56□□□□□ -0.56
TRADD-203ENST00000563348 IFI27L1Q96BM0 104 aa11.56□□□□□ -0.56
TRADD-203ENST00000563348 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
TRADD-203ENST00000563348 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
TRADD-203ENST00000563348 HSBP1O75506 76 aa11.54□□□□□ -0.56
TRADD-203ENST00000563348 MRPL55Q7Z7F7 128 aaKnown RBP11.54□□□□□ -0.56
TRADD-203ENST00000563348 H0Y9J4 135 aa11.53□□□□□ -0.56
TRADD-203ENST00000563348 FAM19A2Q8N3H0 131 aa11.53□□□□□ -0.56
TRADD-203ENST00000563348 PFN2P35080 140 aa11.52□□□□□ -0.57
TRADD-203ENST00000563348 NUPR1O60356 82 aa11.51□□□□□ -0.57
TRADD-203ENST00000563348 IGLV5-37A0A075B6J1 123 aa11.5□□□□□ -0.57
TRADD-203ENST00000563348 COLCA2A8K830 154 aa11.5□□□□□ -0.57
TRADD-203ENST00000563348 COX17Q14061 63 aa11.5□□□□□ -0.57
TRADD-203ENST00000563348 SFTA2Q6UW10 78 aa11.5□□□□□ -0.57
TRADD-203ENST00000563348 LINC00167Q96N53 147 aa11.5□□□□□ -0.57
TRADD-203ENST00000563348 ERG28Q9UKR5 140 aa11.5□□□□□ -0.57
TRADD-203ENST00000563348 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
TRADD-203ENST00000563348 ZNF861PO60384 105 aa11.49□□□□□ -0.57
TRADD-203ENST00000563348 LINC00310P59036 64 aa11.48□□□□□ -0.57
TRADD-203ENST00000563348 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
TRADD-203ENST00000563348 SERF1AO75920 110 aa11.47□□□□□ -0.57
TRADD-203ENST00000563348 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
TRADD-203ENST00000563348 GAGE10A6NGK3 116 aa11.46□□□□□ -0.57
TRADD-203ENST00000563348 RPL37AP8A6NKH3 93 aa11.46□□□□□ -0.57
TRADD-203ENST00000563348 NKAPP1Q8N9T2 125 aa11.46□□□□□ -0.57
TRADD-203ENST00000563348 BCE1O60756 84 aa11.45□□□□□ -0.58
TRADD-203ENST00000563348 LEPROTL1O95214 131 aa11.45□□□□□ -0.58
TRADD-203ENST00000563348 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
TRADD-203ENST00000563348 PRR26Q8N8Z3 221 aa11.45□□□□□ -0.58
TRADD-203ENST00000563348 UBR4Q5T4S7 5183 aa11.42□□□□□ -0.58
TRADD-203ENST00000563348 IGLV1-50A0A075B6I6 118 aa11.42□□□□□ -0.58
TRADD-203ENST00000563348 VPREB1P12018 145 aa11.42□□□□□ -0.58
TRADD-203ENST00000563348 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
TRADD-203ENST00000563348 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
TRADD-203ENST00000563348 H0Y8G0 127 aa11.41□□□□□ -0.58
TRADD-203ENST00000563348 SCO1O75880 301 aa11.41□□□□□ -0.58
TRADD-203ENST00000563348 LINC00158P58513 81 aa11.41□□□□□ -0.58
TRADD-203ENST00000563348 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
TRADD-203ENST00000563348 FABP4P15090 132 aa11.39□□□□□ -0.59
TRADD-203ENST00000563348 LRP2P98164 4655 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms