RNA–Protein interactions for RNA: ENST00000562838.1

AC009065.4-203, humanhuman

TSL 2 BASIC

Gene AC009065.4, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.4-203ENST00000562838 HIST1H2BHQ93079 126 aa12.72□□□□□ -0.37
AC009065.4-203ENST00000562838 HIST1H2BNQ99877 126 aa12.72□□□□□ -0.37
AC009065.4-203ENST00000562838 HIST1H2BMQ99879 126 aa12.72□□□□□ -0.37
AC009065.4-203ENST00000562838 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
AC009065.4-203ENST00000562838 CHTOPQ9Y3Y2 248 aaKnown RBP12.72□□□□□ -0.37
AC009065.4-203ENST00000562838 ABCA13Q86UQ4 5058 aa12.71□□□□□ -0.37
AC009065.4-203ENST00000562838 IGLV5-45A0A087WSX0 123 aa12.71□□□□□ -0.37
AC009065.4-203ENST00000562838 H0Y8G0 127 aa12.71□□□□□ -0.37
AC009065.4-203ENST00000562838 RPL18AQ02543 176 aaKnown RBP12.71□□□□□ -0.37
AC009065.4-203ENST00000562838 Q5VSD8 79 aa12.71□□□□□ -0.37
AC009065.4-203ENST00000562838 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
AC009065.4-203ENST00000562838 SMIM1B2RUZ4 78 aa12.7□□□□□ -0.38
AC009065.4-203ENST00000562838 FABP4P15090 132 aa12.7□□□□□ -0.38
AC009065.4-203ENST00000562838 Q8IZM0 81 aa12.7□□□□□ -0.38
AC009065.4-203ENST00000562838 A0A087WYN8 130 aa12.69□□□□□ -0.38
AC009065.4-203ENST00000562838 CIRBPQ14011 172 aaKnown RBP12.69□□□□□ -0.38
AC009065.4-203ENST00000562838 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
AC009065.4-203ENST00000562838 LINC00528Q8N1L1 170 aa12.69□□□□□ -0.38
AC009065.4-203ENST00000562838 C6orf48Q9UBA6 75 aa12.69□□□□□ -0.38
AC009065.4-203ENST00000562838 C11orf86A6NJI1 115 aa12.68□□□□□ -0.38
AC009065.4-203ENST00000562838 ZNF22P17026 224 aaPredicted RBP12.68□□□□□ -0.38
AC009065.4-203ENST00000562838 TMEM170BQ5T4T1 132 aa12.68□□□□□ -0.38
AC009065.4-203ENST00000562838 LINC00474Q9P2X8 69 aa12.68□□□□□ -0.38
AC009065.4-203ENST00000562838 TRAV12-1A0A0B4J245 112 aa12.67□□□□□ -0.38
AC009065.4-203ENST00000562838 STPG4Q8N801 248 aa12.67□□□□□ -0.38
AC009065.4-203ENST00000562838 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
AC009065.4-203ENST00000562838 HSPB8Q9UJY1 196 aa12.67□□□□□ -0.38
AC009065.4-203ENST00000562838 TRBV30A0A0K0K1B3 111 aa12.66□□□□□ -0.38
AC009065.4-203ENST00000562838 PTTG1IPP53801 180 aa12.66□□□□□ -0.38
AC009065.4-203ENST00000562838 F8VRH5 84 aa12.64□□□□□ -0.39
AC009065.4-203ENST00000562838 CXCL5P42830 114 aa12.64□□□□□ -0.39
AC009065.4-203ENST00000562838 GAGE2EQ4V326 116 aa12.63□□□□□ -0.39
AC009065.4-203ENST00000562838 C9orf116Q5BN46 136 aaPredicted RBP12.63□□□□□ -0.39
AC009065.4-203ENST00000562838 GAGE2DQ9UEU5 116 aa12.63□□□□□ -0.39
AC009065.4-203ENST00000562838 PLA2G1BP04054 148 aaKnown RBP12.62□□□□□ -0.39
AC009065.4-203ENST00000562838 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
AC009065.4-203ENST00000562838 TLX1NBP0CAT3 122 aa12.6□□□□□ -0.39
AC009065.4-203ENST00000562838 Q6ZRP5 223 aa12.6□□□□□ -0.39
AC009065.4-203ENST00000562838 MAP1LC3CQ9BXW4 147 aa12.6□□□□□ -0.39
AC009065.4-203ENST00000562838 ODF1Q14990 250 aa12.59□□□□□ -0.39
AC009065.4-203ENST00000562838 IGLV5-39A0A0G2JS06 123 aa12.58□□□□□ -0.4
AC009065.4-203ENST00000562838 NDUFC2-KCTD14E9PQ53 114 aa12.58□□□□□ -0.4
AC009065.4-203ENST00000562838 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
AC009065.4-203ENST00000562838 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
AC009065.4-203ENST00000562838 FAT1Q14517 4588 aa12.56□□□□□ -0.4
AC009065.4-203ENST00000562838 TMEM223A0PJW6 202 aa12.56□□□□□ -0.4
AC009065.4-203ENST00000562838 PMCHL2Q9BQD1 86 aa12.56□□□□□ -0.4
AC009065.4-203ENST00000562838 A0A1W2PNN7 141 aa12.55□□□□□ -0.4
AC009065.4-203ENST00000562838 INAFM2P0DMQ5 153 aa12.54□□□□□ -0.4
AC009065.4-203ENST00000562838 DPM2O94777 84 aa12.53□□□□□ -0.4
AC009065.4-203ENST00000562838 PLNP26678 52 aa12.53□□□□□ -0.4
AC009065.4-203ENST00000562838 COA6Q5JTJ3 125 aaKnown RBP12.53□□□□□ -0.4
AC009065.4-203ENST00000562838 FAM19A5Q7Z5A7 132 aaPredicted RBP12.52□□□□□ -0.41
AC009065.4-203ENST00000562838 FAM168BA1KXE4 195 aa12.51□□□□□ -0.41
AC009065.4-203ENST00000562838 IGKCP01834 107 aa12.51□□□□□ -0.41
AC009065.4-203ENST00000562838 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
AC009065.4-203ENST00000562838 XAGE1AQ9HD64 81 aa12.51□□□□□ -0.41
AC009065.4-203ENST00000562838 SYS1-DBNDD2H3BUS1 97 aa12.5□□□□□ -0.41
AC009065.4-203ENST00000562838 PFN2P35080 140 aa12.49□□□□□ -0.41
AC009065.4-203ENST00000562838 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
AC009065.4-203ENST00000562838 HERVK_113P61574 105 aa12.48□□□□□ -0.41
AC009065.4-203ENST00000562838 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
AC009065.4-203ENST00000562838 PHF5AQ7RTV0 110 aaKnown RBP12.48□□□□□ -0.41
AC009065.4-203ENST00000562838 KRTDAPP60985 99 aa12.47□□□□□ -0.41
AC009065.4-203ENST00000562838 ERG28Q9UKR5 140 aa12.47□□□□□ -0.41
AC009065.4-203ENST00000562838 VPS13BQ7Z7G8 4022 aa12.46□□□□□ -0.41
AC009065.4-203ENST00000562838 PET117Q6UWS5 81 aa12.46□□□□□ -0.41
AC009065.4-203ENST00000562838 S100A6P06703 90 aa12.45□□□□□ -0.42
AC009065.4-203ENST00000562838 C3orf79P0CE67 100 aa12.45□□□□□ -0.42
AC009065.4-203ENST00000562838 M0QXV9 152 aa12.44□□□□□ -0.42
AC009065.4-203ENST00000562838 LEPROTO15243 131 aa12.44□□□□□ -0.42
AC009065.4-203ENST00000562838 KRTAP10-4P60372 401 aaPredicted RBP12.44□□□□□ -0.42
AC009065.4-203ENST00000562838 PLEKHB2Q96CS7 222 aa12.44□□□□□ -0.42
AC009065.4-203ENST00000562838 NDUFA12Q9UI09 145 aa12.43□□□□□ -0.42
AC009065.4-203ENST00000562838 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
AC009065.4-203ENST00000562838 S100A2P29034 98 aa12.42□□□□□ -0.42
AC009065.4-203ENST00000562838 LINC00158P58513 81 aa12.42□□□□□ -0.42
AC009065.4-203ENST00000562838 MEIG1Q5JSS6 88 aa12.42□□□□□ -0.42
AC009065.4-203ENST00000562838 LINC01545Q5VT33 79 aa12.42□□□□□ -0.42
AC009065.4-203ENST00000562838 LGALS3P17931 250 aaKnown RBP12.41□□□□□ -0.42
AC009065.4-203ENST00000562838 UBE2BP63146 152 aa12.41□□□□□ -0.42
AC009065.4-203ENST00000562838 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
AC009065.4-203ENST00000562838 COX17Q14061 63 aa12.41□□□□□ -0.42
AC009065.4-203ENST00000562838 SERTAD4-AS1Q5TG53 156 aa12.41□□□□□ -0.42
AC009065.4-203ENST00000562838 FLG2Q5D862 2391 aaPredicted RBP12.41□□□□□ -0.42
AC009065.4-203ENST00000562838 SRRM2Q9UQ35 2752 aaKnown RBP12.41□□□□□ -0.42
AC009065.4-203ENST00000562838 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
AC009065.4-203ENST00000562838 KRTAP7-1Q8IUC3 87 aa12.4□□□□□ -0.42
AC009065.4-203ENST00000562838 C20orf202A1L168 122 aa12.39□□□□□ -0.43
AC009065.4-203ENST00000562838 J3QQQ9 107 aa12.39□□□□□ -0.43
AC009065.4-203ENST00000562838 TSPEAR-AS2P59090 65 aa12.39□□□□□ -0.43
AC009065.4-203ENST00000562838 HERV-K104P63124 156 aa12.39□□□□□ -0.43
AC009065.4-203ENST00000562838 HIST3H2BBQ8N257 126 aa12.38□□□□□ -0.43
AC009065.4-203ENST00000562838 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
AC009065.4-203ENST00000562838 SMIM13P0DJ93 91 aa12.37□□□□□ -0.43
AC009065.4-203ENST00000562838 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
AC009065.4-203ENST00000562838 SND1-IT1Q9HBX3 110 aa12.37□□□□□ -0.43
AC009065.4-203ENST00000562838 PSORS1C2Q9UIG4 136 aa12.36□□□□□ -0.43
AC009065.4-203ENST00000562838 E9PLD3 99 aa12.35□□□□□ -0.43
AC009065.4-203ENST00000562838 LBHQ53QV2 105 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms