RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 NUPR1O60356 82 aa11.79□□□□□ -0.52
PKD1-223ENST00000561668 TLX1NBP0CAT3 122 aa11.79□□□□□ -0.52
PKD1-223ENST00000561668 PTTG1IPP53801 180 aa11.79□□□□□ -0.52
PKD1-223ENST00000561668 KRTAP29-1A8MX34 341 aaPredicted RBP11.78□□□□□ -0.52
PKD1-223ENST00000561668 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BKO60814 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BJP06899 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BOP23527 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BBP33778 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BDP58876 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BCP62807 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST2H2BEQ16778 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.78□□□□□ -0.52
PKD1-223ENST00000561668 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 FAM19A2Q8N3H0 131 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 LINC00469Q8N7U9 141 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BHQ93079 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 IFI27L1Q96BM0 104 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BNQ99877 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 HIST1H2BMQ99879 126 aa11.78□□□□□ -0.52
PKD1-223ENST00000561668 UNQ6190/PRO20217Q6UXQ8 127 aa11.77□□□□□ -0.53
PKD1-223ENST00000561668 TRBV30A0A0K0K1B3 111 aa11.76□□□□□ -0.53
PKD1-223ENST00000561668 C6orf48Q9UBA6 75 aa11.76□□□□□ -0.53
PKD1-223ENST00000561668 ATP6V1G1O75348 118 aa11.75□□□□□ -0.53
PKD1-223ENST00000561668 OXTP01178 125 aa11.75□□□□□ -0.53
PKD1-223ENST00000561668 PRSS2P07478 247 aa11.75□□□□□ -0.53
PKD1-223ENST00000561668 PACRGQ96M98 296 aaPredicted RBP11.75□□□□□ -0.53
PKD1-223ENST00000561668 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
PKD1-223ENST00000561668 ZNF22P17026 224 aaPredicted RBP11.74□□□□□ -0.53
PKD1-223ENST00000561668 C2orf82Q6UX34 121 aa11.74□□□□□ -0.53
PKD1-223ENST00000561668 DMBT1Q9UGM3 2413 aaPredicted RBP11.74□□□□□ -0.53
PKD1-223ENST00000561668 H3BRM9 83 aa11.73□□□□□ -0.53
PKD1-223ENST00000561668 CXCL5P42830 114 aa11.73□□□□□ -0.53
PKD1-223ENST00000561668 NDUFA6P56556 154 aa11.73□□□□□ -0.53
PKD1-223ENST00000561668 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
PKD1-223ENST00000561668 C11orf86A6NJI1 115 aa11.72□□□□□ -0.53
PKD1-223ENST00000561668 LEPROTL1O95214 131 aa11.72□□□□□ -0.53
PKD1-223ENST00000561668 CKS1BP61024 79 aa11.72□□□□□ -0.53
PKD1-223ENST00000561668 COA6Q5JTJ3 125 aaKnown RBP11.72□□□□□ -0.53
PKD1-223ENST00000561668 CHTOPQ9Y3Y2 248 aaKnown RBP11.72□□□□□ -0.53
PKD1-223ENST00000561668 TOMM7Q9P0U1 55 aa11.71□□□□□ -0.53
PKD1-223ENST00000561668 F8VRH5 84 aa11.7□□□□□ -0.54
PKD1-223ENST00000561668 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
PKD1-223ENST00000561668 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
PKD1-223ENST00000561668 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
PKD1-223ENST00000561668 ODF1Q14990 250 aa11.69□□□□□ -0.54
PKD1-223ENST00000561668 C9orf116Q5BN46 136 aaPredicted RBP11.69□□□□□ -0.54
PKD1-223ENST00000561668 Q6ZRP5 223 aa11.69□□□□□ -0.54
PKD1-223ENST00000561668 HSPB8Q9UJY1 196 aa11.69□□□□□ -0.54
PKD1-223ENST00000561668 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
PKD1-223ENST00000561668 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
PKD1-223ENST00000561668 NDUFC2-KCTD14E9PQ53 114 aa11.68□□□□□ -0.54
PKD1-223ENST00000561668 PRR3P79522 188 aaKnown RBP11.67□□□□□ -0.54
PKD1-223ENST00000561668 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
PKD1-223ENST00000561668 GAGE2DQ9UEU5 116 aa11.67□□□□□ -0.54
PKD1-223ENST00000561668 TMEM223A0PJW6 202 aa11.65□□□□□ -0.54
PKD1-223ENST00000561668 TMEM170BQ5T4T1 132 aa11.64□□□□□ -0.55
PKD1-223ENST00000561668 FABP4P15090 132 aa11.63□□□□□ -0.55
PKD1-223ENST00000561668 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
PKD1-223ENST00000561668 SFTA2Q6UW10 78 aa11.6□□□□□ -0.55
PKD1-223ENST00000561668 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
PKD1-223ENST00000561668 PHF5AQ7RTV0 110 aaKnown RBP11.6□□□□□ -0.55
PKD1-223ENST00000561668 KRTAP7-1Q8IUC3 87 aa11.6□□□□□ -0.55
PKD1-223ENST00000561668 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
PKD1-223ENST00000561668 MAP1LC3CQ9BXW4 147 aa11.6□□□□□ -0.55
PKD1-223ENST00000561668 HERC1Q15751 4861 aa11.6□□□□□ -0.55
PKD1-223ENST00000561668 PLNP26678 52 aa11.59□□□□□ -0.55
PKD1-223ENST00000561668 FAM19A5Q7Z5A7 132 aaPredicted RBP11.59□□□□□ -0.55
PKD1-223ENST00000561668 FAM168BA1KXE4 195 aa11.58□□□□□ -0.56
PKD1-223ENST00000561668 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
PKD1-223ENST00000561668 DPM2O94777 84 aa11.57□□□□□ -0.56
PKD1-223ENST00000561668 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
PKD1-223ENST00000561668 COX17Q14061 63 aa11.56□□□□□ -0.56
PKD1-223ENST00000561668 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
PKD1-223ENST00000561668 REG3GQ6UW15 175 aa11.56□□□□□ -0.56
PKD1-223ENST00000561668 PSORS1C2Q9UIG4 136 aa11.56□□□□□ -0.56
PKD1-223ENST00000561668 H0Y8G0 127 aa11.55□□□□□ -0.56
PKD1-223ENST00000561668 IGKCP01834 107 aa11.54□□□□□ -0.56
PKD1-223ENST00000561668 UBE2BP63146 152 aa11.54□□□□□ -0.56
PKD1-223ENST00000561668 LINC01545Q5VT33 79 aa11.54□□□□□ -0.56
PKD1-223ENST00000561668 PET117Q6UWS5 81 aa11.54□□□□□ -0.56
PKD1-223ENST00000561668 PLA2G2DQ9UNK4 145 aa11.54□□□□□ -0.56
PKD1-223ENST00000561668 M0QXV9 152 aa11.53□□□□□ -0.56
PKD1-223ENST00000561668 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
PKD1-223ENST00000561668 ERG28Q9UKR5 140 aa11.52□□□□□ -0.57
PKD1-223ENST00000561668 LEPROTO15243 131 aa11.51□□□□□ -0.57
PKD1-223ENST00000561668 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
PKD1-223ENST00000561668 PMCHL2Q9BQD1 86 aa11.51□□□□□ -0.57
PKD1-223ENST00000561668 XAGE1AQ9HD64 81 aa11.51□□□□□ -0.57
PKD1-223ENST00000561668 LRP1Q07954 4544 aaKnown RBP11.51□□□□□ -0.57
PKD1-223ENST00000561668 PKHD1L1Q86WI1 4243 aa11.5□□□□□ -0.57
PKD1-223ENST00000561668 LINC01600Q96MT4 127 aa11.5□□□□□ -0.57
PKD1-223ENST00000561668 TP73-AS1Q9UF72 201 aa11.5□□□□□ -0.57
PKD1-223ENST00000561668 HERV-K104P63124 156 aa11.49□□□□□ -0.57
PKD1-223ENST00000561668 LBHQ53QV2 105 aaPredicted RBP11.49□□□□□ -0.57
PKD1-223ENST00000561668 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
PKD1-223ENST00000561668 IGLV5-37A0A075B6J1 123 aa11.48□□□□□ -0.57
PKD1-223ENST00000561668 IGLV7-43P04211 117 aa11.47□□□□□ -0.57
PKD1-223ENST00000561668 TSPEAR-AS2P59090 65 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms