RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 FANCMQ8IYD8 2048 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 SCN3AQ9NY46 2000 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 OBSL1O75147 1896 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 NUP210Q8TEM1 1887 aaPredicted RBP0.93□□□□□ -2.26
USP8-216ENST00000561206 TRAV12-2A0A075B6T6 113 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 IGKV1OR2-108A0A075B7D4 117 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 IGHV3OR15-7A0A075B7D8 119 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 IGKV2D-26A0A0A0MRZ7 120 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.93□□□□□ -2.26
USP8-216ENST00000561206 IGHV3-43A0A0B4J1X8 118 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 IGKV1D-43A0A0B4J1Z2 117 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 TRAV17A0A0B4J275 112 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 TEX49A0A1B0GTD5 131 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 CXorf51AA0A1B0GTR3 108 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 ZNF815PA8K554 130 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 D6R8Y8 96 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 LY6LH3BQJ8 138 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 K7EMI3 77 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 LYZL6O75951 148 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 IGLV3-1P01715 115 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 COX6CP09669 75 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 SPTBP11277 2137 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 HMGA1P17096 107 aaKnown RBP0.93□□□□□ -2.26
USP8-216ENST00000561206 CRYGSP22914 178 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 CD24P25063 80 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 PSMB8P28062 276 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 CKS2P33552 79 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 IFI27P40305 119 aaPredicted RBP0.93□□□□□ -2.26
USP8-216ENST00000561206 UBE2D1P51668 147 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 EFNA4P52798 201 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 FGF12P61328 243 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 PCBD1P61457 104 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 CCL8P80075 99 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 NNATQ16517 81 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 PIGYQ3MUY2 71 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 SPINK9Q5DT21 86 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 Q5XG85 94 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 SFTA2Q6UW10 78 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 Q6ZRU5 148 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 VN1R4Q7Z5H5 301 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 RPS19BP1Q86WX3 136 aaKnown RBP0.93□□□□□ -2.26
USP8-216ENST00000561206 NDUFA11Q86Y39 141 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 EXOC3-AS1Q8N2X6 119 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 WFDC11Q8NEX6 87 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 C10orf105Q8TEF2 133 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 BRK1Q8WUW1 75 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 TTTY13Q9BZ97 58 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 DPH3P1Q9H4G8 78 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 PRO1854Q9UHT4 67 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 SERP1Q9Y6X1 66 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 U3KQK5 164 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 MUC12Q9UKN1 5478 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 COL7A1Q02388 2944 aa0.93□□□□□ -2.26
USP8-216ENST00000561206 COL6A6A6NMZ7 2263 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 TACC2O95359 2948 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 EXPH5Q8NEV8 1989 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 MPDZO75970 2070 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 NCOA6Q14686 2063 aaPredicted RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 HEATR5BQ9P2D3 2071 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 TRGV5A0A0B4J1U4 118 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 TRAV12-1A0A0B4J245 112 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 TRAV26-2A0A0B4J265 109 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 TRAV41A0A0B4J266 112 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 IGKV1-12A0A0C4DH73 117 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 A0A1W2PQD3 144 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 C19orf71A6NCJ1 209 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 F8VRH5 84 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 H0YGG7 62 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 H7C2G1 150 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 M0R381 172 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 ZNF73O43830 326 aaPredicted RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 SH2D1AO60880 128 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 NDUFA3O95167 84 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 IGKV1D-12P01611 117 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 ARMS2P0C7Q2 107 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 SLC25A16P16260 332 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 PLNP26678 52 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 FKBP2P26885 142 aaKnown RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 ATP5EP56381 51 aaPredicted RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 FXYD7P58549 80 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 MRPS36P82909 103 aaKnown RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 MRPL51Q4U2R6 128 aaKnown RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 DEFB121Q5J5C9 76 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 S100A7L2Q5SY68 101 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 FAM201AQ5SY85 155 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 C10orf113Q5VZT2 155 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 SCXQ7RTU7 201 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 LINC00305Q7Z4B0 112 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 C5orf38Q86SI9 138 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 LINC00311Q8N616 119 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 SERP2Q8N6R1 65 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 Q8N8P6 123 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 DAND5Q8N907 189 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 WFDC5Q8TCV5 224 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 COX14Q96I36 57 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 LINC01600Q96MT4 127 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 OTORQ9NRC9 128 aa0.92□□□□□ -2.26
USP8-216ENST00000561206 MRPL35Q9NZE8 188 aaKnown RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 RPUSD1Q9UJJ7 312 aaKnown RBP0.92□□□□□ -2.26
USP8-216ENST00000561206 HHLA3Q9XRX5 114 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms