RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
SNX1-212ENST00000560861 EREGO14944 169 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 APOMO95445 188 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 MALP21145 153 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 HERV-K104P63124 156 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 TAL2Q16559 108 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 RMI2Q96E14 147 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 SNHG12Q9BXW3 62 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 TOMM7Q9P0U1 55 aa7.47□□□□□ -1.21
SNX1-212ENST00000560861 SPAG11BQ08648 103 aa7.46□□□□□ -1.22
SNX1-212ENST00000560861 TTC32Q5I0X7 151 aa7.46□□□□□ -1.22
SNX1-212ENST00000560861 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.22
SNX1-212ENST00000560861 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
SNX1-212ENST00000560861 NTN5Q8WTR8 489 aaPredicted RBP7.46□□□□□ -1.22
SNX1-212ENST00000560861 GVQW2A0A096LPI5 108 aaPredicted RBP7.45□□□□□ -1.22
SNX1-212ENST00000560861 CXCL5P42830 114 aa7.45□□□□□ -1.22
SNX1-212ENST00000560861 BVES-AS1Q5T3Y7 98 aa7.45□□□□□ -1.22
SNX1-212ENST00000560861 SFTA2Q6UW10 78 aa7.45□□□□□ -1.22
SNX1-212ENST00000560861 C2orf82Q6UX34 121 aa7.45□□□□□ -1.22
SNX1-212ENST00000560861 Q6ZR54 194 aa7.45□□□□□ -1.22
SNX1-212ENST00000560861 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
SNX1-212ENST00000560861 TM2D2Q9BX73 214 aa7.45□□□□□ -1.22
SNX1-212ENST00000560861 M0R143 59 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 PRSS2P07478 247 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 HINT1P49773 126 aaPredicted RBP7.44□□□□□ -1.22
SNX1-212ENST00000560861 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 C6orf223Q8N319 242 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 LINC00476Q8WZB0 136 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 SPANXDQ9BXN6 97 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
SNX1-212ENST00000560861 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
SNX1-212ENST00000560861 C10orf25Q5T742 122 aa7.43□□□□□ -1.22
SNX1-212ENST00000560861 CFAP161Q6P656 301 aa7.43□□□□□ -1.22
SNX1-212ENST00000560861 LINC00526Q96FQ7 95 aa7.43□□□□□ -1.22
SNX1-212ENST00000560861 C2orf48Q96LS8 159 aa7.43□□□□□ -1.22
SNX1-212ENST00000560861 DNAH10Q8IVF4 4471 aa7.43□□□□□ -1.22
SNX1-212ENST00000560861 USP17L23D6RBM5 183 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 SMIM13P0DJ93 91 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 PTTG1IPP53801 180 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 FXYD2P54710 66 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 WFDC2Q14508 124 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 UNQ6190/PRO20217Q6UXQ8 127 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 CEND1Q8N111 149 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 HIST1H4GQ99525 98 aa7.42□□□□□ -1.22
SNX1-212ENST00000560861 F8WDY8 70 aa7.41□□□□□ -1.22
SNX1-212ENST00000560861 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
SNX1-212ENST00000560861 CKS1BP61024 79 aa7.41□□□□□ -1.22
SNX1-212ENST00000560861 Q6ZVH6 145 aa7.41□□□□□ -1.22
SNX1-212ENST00000560861 PPDPFQ9H3Y8 114 aa7.41□□□□□ -1.22
SNX1-212ENST00000560861 C6orf48Q9UBA6 75 aa7.41□□□□□ -1.22
SNX1-212ENST00000560861 ERG28Q9UKR5 140 aa7.41□□□□□ -1.22
SNX1-212ENST00000560861 GCSHP23434 173 aa7.4□□□□□ -1.22
SNX1-212ENST00000560861 MEIG1Q5JSS6 88 aa7.4□□□□□ -1.22
SNX1-212ENST00000560861 SOSTDC1Q6X4U4 206 aa7.4□□□□□ -1.22
SNX1-212ENST00000560861 DNAH2Q9P225 4427 aa7.4□□□□□ -1.22
SNX1-212ENST00000560861 A0A1B0GWB2 263 aa7.39□□□□□ -1.23
SNX1-212ENST00000560861 SLPIP03973 132 aa7.39□□□□□ -1.23
SNX1-212ENST00000560861 IFITM1P13164 125 aa7.39□□□□□ -1.23
SNX1-212ENST00000560861 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNX1-212ENST00000560861 CIRBPQ14011 172 aaKnown RBP7.39□□□□□ -1.23
SNX1-212ENST00000560861 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
SNX1-212ENST00000560861 DAND5Q8N907 189 aa7.39□□□□□ -1.23
SNX1-212ENST00000560861 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
SNX1-212ENST00000560861 BIRC6Q9NR09 4857 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 TRBV30A0A0K0K1B3 111 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 A0A0U1RRA0 63 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 LRCOL1A6NCL2 159 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 M0R2N4 97 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 C9orf116Q5BN46 136 aaPredicted RBP7.38□□□□□ -1.23
SNX1-212ENST00000560861 Q6ZRU5 148 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 KMT2AQ03164 3969 aa7.38□□□□□ -1.23
SNX1-212ENST00000560861 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 LOC107984156A0A0G2JMH3 177 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 LY6G6CO95867 125 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 COX17Q14061 63 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 BATFQ16520 125 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 ARL17AQ8IVW1 177 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 MIR7-3HGQ8N6C7 128 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
SNX1-212ENST00000560861 A4D1N5 150 aa7.36□□□□□ -1.23
SNX1-212ENST00000560861 LECT2O14960 151 aa7.36□□□□□ -1.23
SNX1-212ENST00000560861 PFN2P35080 140 aa7.36□□□□□ -1.23
SNX1-212ENST00000560861 LINC00158P58513 81 aa7.36□□□□□ -1.23
SNX1-212ENST00000560861 SYCNQ0VAF6 134 aa7.36□□□□□ -1.23
SNX1-212ENST00000560861 RNF151Q2KHN1 245 aa7.36□□□□□ -1.23
SNX1-212ENST00000560861 LBHQ53QV2 105 aaPredicted RBP7.36□□□□□ -1.23
SNX1-212ENST00000560861 PSCAO43653 123 aa7.34□□□□□ -1.23
SNX1-212ENST00000560861 NPC2P61916 151 aa7.34□□□□□ -1.23
SNX1-212ENST00000560861 CNBPP62633 177 aaKnown RBP7.34□□□□□ -1.23
SNX1-212ENST00000560861 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.23
SNX1-212ENST00000560861 COL5A1-AS1Q5SY13 56 aa7.34□□□□□ -1.23
SNX1-212ENST00000560861 CARD19Q96LW7 228 aa7.34□□□□□ -1.23
SNX1-212ENST00000560861 A6NDN8 102 aa7.33□□□□□ -1.24
SNX1-212ENST00000560861 K7ERJ3 54 aa7.33□□□□□ -1.24
SNX1-212ENST00000560861 TAX1BP3O14907 124 aa7.33□□□□□ -1.24
SNX1-212ENST00000560861 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
SNX1-212ENST00000560861 CFC1BP0CG36 223 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms