RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 RNASE4P34096 147 aaKnown RBP1.57□□□□□ -2.16
LRRC28-218ENST00000560236 CDC34P49427 236 aaPredicted RBP1.57□□□□□ -2.16
LRRC28-218ENST00000560236 RPS20P60866 119 aaKnown RBP1.57□□□□□ -2.16
LRRC28-218ENST00000560236 RANP62826 216 aaKnown RBP1.57□□□□□ -2.16
LRRC28-218ENST00000560236 RBX1P62877 108 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 KRTAP19-2Q3LHN2 52 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 COX19Q49B96 90 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 LINC00483Q53H64 154 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 GCSAMLQ5JQS6 135 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 RASL11AQ6T310 242 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 TMEM136Q6ZRR5 245 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 LINC00173Q6ZV60 143 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 FP248Q71RG6 208 aaPredicted RBP1.57□□□□□ -2.16
LRRC28-218ENST00000560236 DTD1Q8TEA8 209 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 TSKUQ8WUA8 353 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 ORAOV1Q8WV07 137 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 SFRP2Q96HF1 295 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 MGST2Q99735 147 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 SHANK2-AS3Q9BTD1 123 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 DERL1Q9BUN8 251 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 GNB1LQ9BYB4 327 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 OSTCQ9NRP0 149 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 IL36BQ9NZH7 164 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 ZFP30Q9Y2G7 519 aa1.57□□□□□ -2.16
LRRC28-218ENST00000560236 A0A1B0GXF2 115 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 A0A1W2PRE2 83 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 SMIM27A0A1W2PRY6 76 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 C20orf202A1L168 122 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 TMEM262E9PQX1 116 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 C17orf112F2Z3M2 114 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 MRPS12O15235 138 aaKnown RBP1.56□□□□□ -2.16
LRRC28-218ENST00000560236 HYPMO75409 117 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 CXorf1O96002 111 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 PPBPP02775 128 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 ANGP03950 147 aaKnown RBP1.56□□□□□ -2.16
LRRC28-218ENST00000560236 OR5G3P0C626 314 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 ARL14EPLP0DKL9 152 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 LINC00694P0DN24 101 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 ZNF25P17030 456 aaPredicted RBP1.56□□□□□ -2.16
LRRC28-218ENST00000560236 GCHFRP30047 84 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 CEBPGP53567 150 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 PLP1P60201 277 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 SPANXN5Q5MJ07 72 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 KRTAP26-1Q6PEX3 210 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 FAM231DQ6ZW35 169 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 BPIFA4PQ86YQ2 179 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 GATD1Q8NB37 220 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 CMTM2Q8TAZ6 248 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 FAM167A-AS1Q96KT0 104 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 RPP21Q9H633 154 aaKnown RBP1.56□□□□□ -2.16
LRRC28-218ENST00000560236 HIGD1AQ9Y241 93 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 TRAPPC1Q9Y5R8 145 aa1.56□□□□□ -2.16
LRRC28-218ENST00000560236 A0A096LNI7 61 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 TRBV6-1A0A0K0K1D8 114 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 GRIFINA4D1Z8 144 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 HMGB3O15347 200 aaKnown RBP1.55□□□□□ -2.16
LRRC28-218ENST00000560236 CCL25O15444 150 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 C3orf79P0CE67 100 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 HIST1H1EP10412 219 aaKnown RBP1.55□□□□□ -2.16
LRRC28-218ENST00000560236 NMUP48645 174 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 FOXA3P55318 350 aaPredicted RBP1.55□□□□□ -2.16
LRRC28-218ENST00000560236 SS18Q15532 418 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 PMCHL1Q16048 86 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 DEFB116Q30KQ4 102 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 CENPWQ5EE01 88 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 COL5A1-AS1Q5SY13 56 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 TMEM78Q5T7P6 136 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 CFAP126Q5VTH2 177 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 MIC13Q5XKP0 118 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 MIR17HGQ75NE6 70 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 ATP5L2Q7Z4Y8 100 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 OR2D3Q8NGH3 330 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 C18orf32Q8TCD1 76 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 PTH2Q96A98 100 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 SMIM12Q96EX1 92 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 KCNS1Q96KK3 526 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 RETNLBQ9BQ08 111 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 VAMP8Q9BV40 100 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 NPVFQ9HCQ7 196 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 TMEM167BQ9NRX6 74 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 ZNF492Q9P255 531 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 UQCR10Q9UDW1 63 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 LAMTOR2Q9Y2Q5 125 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 CBY1Q9Y3M2 126 aa1.55□□□□□ -2.16
LRRC28-218ENST00000560236 A0A1W2PPV4 95 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 C19orf71A6NCJ1 209 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 A8MWV9 139 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 TAX1BP3O14907 124 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 G0S2P27469 103 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 GNG4P50150 75 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 UBE2G2P60604 165 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 KIAA0087Q14695 138 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 TMEM97Q5BJF2 176 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 SAPCD1Q5SSQ6 148 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 Q6AWC8 147 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 PATE2Q6UY27 113 aa1.54□□□□□ -2.16
LRRC28-218ENST00000560236 ZFAND2AQ8N6M9 145 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms