RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RPS28P62857 69 aaKnown RBP9.99□□□□□ -0.81
CSPG4P12-202ENST00000559989 BCE1O60756 84 aa9.98□□□□□ -0.81
CSPG4P12-202ENST00000559989 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
CSPG4P12-202ENST00000559989 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.81
CSPG4P12-202ENST00000559989 LINC00846Q9NV44 126 aa9.96□□□□□ -0.81
CSPG4P12-202ENST00000559989 IGLV8-61A0A075B6I0 122 aa9.95□□□□□ -0.82
CSPG4P12-202ENST00000559989 Q8N2B8 174 aa9.95□□□□□ -0.82
CSPG4P12-202ENST00000559989 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
CSPG4P12-202ENST00000559989 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
CSPG4P12-202ENST00000559989 PRR9Q5T870 116 aa9.94□□□□□ -0.82
CSPG4P12-202ENST00000559989 GVINP1Q7Z2Y8 2422 aa9.93□□□□□ -0.82
CSPG4P12-202ENST00000559989 LINC00313P59037 77 aa9.92□□□□□ -0.82
CSPG4P12-202ENST00000559989 C1orf134Q5TEV5 83 aa9.92□□□□□ -0.82
CSPG4P12-202ENST00000559989 ADAMTSL4-AS1Q5T5F5 129 aa9.9□□□□□ -0.82
CSPG4P12-202ENST00000559989 A0A1B0GW54 56 aa9.9□□□□□ -0.82
CSPG4P12-202ENST00000559989 LY6G6DO95868 133 aa9.9□□□□□ -0.82
CSPG4P12-202ENST00000559989 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.83
CSPG4P12-202ENST00000559989 SMCR5Q8TEV8 140 aa9.9□□□□□ -0.83
CSPG4P12-202ENST00000559989 MDFIQ99750 246 aa9.89□□□□□ -0.83
CSPG4P12-202ENST00000559989 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
CSPG4P12-202ENST00000559989 KIAA0087Q14695 138 aa9.88□□□□□ -0.83
CSPG4P12-202ENST00000559989 AMELXQ99217 191 aa9.88□□□□□ -0.83
CSPG4P12-202ENST00000559989 C11orf21Q9P2W6 132 aa9.88□□□□□ -0.83
CSPG4P12-202ENST00000559989 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 A0A1B0GUV1 79 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 C18orf65Q6ZTR6 163 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 TSPEAR-AS2P59090 65 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 PLA2G5P39877 138 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 BRWD1-AS2P59051 145 aa9.87□□□□□ -0.83
CSPG4P12-202ENST00000559989 GAS8-AS1O95177 125 aa9.86□□□□□ -0.83
CSPG4P12-202ENST00000559989 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
CSPG4P12-202ENST00000559989 OTOGLQ3ZCN5 2332 aa9.86□□□□□ -0.83
CSPG4P12-202ENST00000559989 MOBPQ13875 183 aa9.86□□□□□ -0.83
CSPG4P12-202ENST00000559989 LINC01006Q8NI28 216 aa9.85□□□□□ -0.83
CSPG4P12-202ENST00000559989 SPATA3Q8NHX4 192 aa9.85□□□□□ -0.83
CSPG4P12-202ENST00000559989 FHL2Q14192 279 aa9.84□□□□□ -0.83
CSPG4P12-202ENST00000559989 C1orf229Q6ZS94 237 aaPredicted RBP9.84□□□□□ -0.83
CSPG4P12-202ENST00000559989 IGLV1-40P01703 118 aa9.84□□□□□ -0.83
CSPG4P12-202ENST00000559989 A8MTW9 85 aa9.83□□□□□ -0.84
CSPG4P12-202ENST00000559989 C22orf24Q9Y442 160 aa9.83□□□□□ -0.84
CSPG4P12-202ENST00000559989 UQCR11O14957 56 aa9.83□□□□□ -0.84
CSPG4P12-202ENST00000559989 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
CSPG4P12-202ENST00000559989 LINC01600Q96MT4 127 aa9.81□□□□□ -0.84
CSPG4P12-202ENST00000559989 LINC01554Q52M75 96 aa9.81□□□□□ -0.84
CSPG4P12-202ENST00000559989 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
CSPG4P12-202ENST00000559989 LUZP6Q538Z0 58 aa9.8□□□□□ -0.84
CSPG4P12-202ENST00000559989 CDIP1Q9H305 208 aa9.8□□□□□ -0.84
CSPG4P12-202ENST00000559989 Q8NA96 180 aa9.8□□□□□ -0.84
CSPG4P12-202ENST00000559989 EPM2AB3EWF7 344 aa9.79□□□□□ -0.84
CSPG4P12-202ENST00000559989 Q6ZRU5 148 aa9.79□□□□□ -0.84
CSPG4P12-202ENST00000559989 C11orf71Q6IPW1 123 aa9.79□□□□□ -0.84
CSPG4P12-202ENST00000559989 NBASA2RRP1 2371 aa9.79□□□□□ -0.84
CSPG4P12-202ENST00000559989 C19orf84I3L1E1 186 aa9.78□□□□□ -0.84
CSPG4P12-202ENST00000559989 EDN2P20800 178 aa9.78□□□□□ -0.84
CSPG4P12-202ENST00000559989 CD164Q04900 197 aa9.78□□□□□ -0.84
CSPG4P12-202ENST00000559989 HIVEP2P31629 2446 aa9.78□□□□□ -0.84
CSPG4P12-202ENST00000559989 LYPD5Q6UWN5 251 aa9.78□□□□□ -0.84
CSPG4P12-202ENST00000559989 LOC101927531A0A1B0GV80 90 aa9.77□□□□□ -0.84
CSPG4P12-202ENST00000559989 CREBBPQ92793 2442 aa9.77□□□□□ -0.85
CSPG4P12-202ENST00000559989 MIR22HGQ0VDD5 57 aa9.76□□□□□ -0.85
CSPG4P12-202ENST00000559989 ERC2-IT1O76042 136 aa9.76□□□□□ -0.85
CSPG4P12-202ENST00000559989 Q96NJ1 140 aa9.74□□□□□ -0.85
CSPG4P12-202ENST00000559989 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
CSPG4P12-202ENST00000559989 Q8NBF4 154 aa9.74□□□□□ -0.85
CSPG4P12-202ENST00000559989 BRI3O95415 125 aa9.74□□□□□ -0.85
CSPG4P12-202ENST00000559989 Q6ZPA2 131 aa9.73□□□□□ -0.85
CSPG4P12-202ENST00000559989 COA5Q86WW8 74 aa9.73□□□□□ -0.85
CSPG4P12-202ENST00000559989 LOC110117498A0A087WWA1 95 aa9.73□□□□□ -0.85
CSPG4P12-202ENST00000559989 ZNF580Q9UK33 172 aa9.73□□□□□ -0.85
CSPG4P12-202ENST00000559989 PTPRQQ9UMZ3 2332 aa9.72□□□□□ -0.85
CSPG4P12-202ENST00000559989 SPG11Q96JI7 2443 aa9.72□□□□□ -0.85
CSPG4P12-202ENST00000559989 FAM229AH3BQW9 127 aa9.71□□□□□ -0.85
CSPG4P12-202ENST00000559989 Q6ZQT0 140 aa9.71□□□□□ -0.86
CSPG4P12-202ENST00000559989 NHLRC4P0CG21 123 aaPredicted RBP9.71□□□□□ -0.86
CSPG4P12-202ENST00000559989 IGLV1-51P01701 117 aa9.7□□□□□ -0.86
CSPG4P12-202ENST00000559989 URB1-AS1Q96HZ7 61 aa9.7□□□□□ -0.86
CSPG4P12-202ENST00000559989 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
CSPG4P12-202ENST00000559989 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
CSPG4P12-202ENST00000559989 LCA10Q71F78 164 aa9.7□□□□□ -0.86
CSPG4P12-202ENST00000559989 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
CSPG4P12-202ENST00000559989 TM2D3Q9BRN9 247 aa9.69□□□□□ -0.86
CSPG4P12-202ENST00000559989 ELOF1P60002 83 aaKnown RBP9.68□□□□□ -0.86
CSPG4P12-202ENST00000559989 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
CSPG4P12-202ENST00000559989 KIF25-AS1Q9Y6Z4 181 aa9.66□□□□□ -0.86
CSPG4P12-202ENST00000559989 Q6ZSN1 163 aa9.66□□□□□ -0.86
CSPG4P12-202ENST00000559989 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
CSPG4P12-202ENST00000559989 CDC42SE1Q9NRR8 79 aa9.66□□□□□ -0.86
CSPG4P12-202ENST00000559989 LINC00310P59036 64 aa9.65□□□□□ -0.86
CSPG4P12-202ENST00000559989 A8MUN3 132 aa9.65□□□□□ -0.87
CSPG4P12-202ENST00000559989 A8MWP4 228 aa9.64□□□□□ -0.87
CSPG4P12-202ENST00000559989 COL4A3Q01955 1670 aa9.64□□□□□ -0.87
CSPG4P12-202ENST00000559989 FAM19A4Q96LR4 140 aa9.64□□□□□ -0.87
CSPG4P12-202ENST00000559989 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
CSPG4P12-202ENST00000559989 RIF1Q5UIP0 2472 aaKnown RBP9.64□□□□□ -0.87
CSPG4P12-202ENST00000559989 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
CSPG4P12-202ENST00000559989 LTBP2Q14767 1821 aa9.63□□□□□ -0.87
CSPG4P12-202ENST00000559989 C16orf95Q9H693 158 aa9.63□□□□□ -0.87
CSPG4P12-202ENST00000559989 COL27A1Q8IZC6 1860 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms