RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
RABGGTA-206ENST00000558649 IGLC3P0DOY3 106 aa10.03□□□□□ -0.8
RABGGTA-206ENST00000558649 Q8IZM0 81 aa10.03□□□□□ -0.8
RABGGTA-206ENST00000558649 PLAC8Q9NZF1 115 aa10.03□□□□□ -0.8
RABGGTA-206ENST00000558649 ABCA13Q86UQ4 5058 aa10.03□□□□□ -0.8
RABGGTA-206ENST00000558649 H3BRM9 83 aa10.02□□□□□ -0.81
RABGGTA-206ENST00000558649 LINC00310P59036 64 aa10.02□□□□□ -0.81
RABGGTA-206ENST00000558649 RPL37AP61513 92 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-206ENST00000558649 IFI27L1Q96BM0 104 aa10.02□□□□□ -0.81
RABGGTA-206ENST00000558649 TRBV30A0A0K0K1B3 111 aa10.01□□□□□ -0.81
RABGGTA-206ENST00000558649 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
RABGGTA-206ENST00000558649 H0Y8G0 127 aa10□□□□□ -0.81
RABGGTA-206ENST00000558649 GAGE2EQ4V326 116 aa10□□□□□ -0.81
RABGGTA-206ENST00000558649 COX7B2Q8TF08 81 aa10□□□□□ -0.81
RABGGTA-206ENST00000558649 GAGE2DQ9UEU5 116 aa10□□□□□ -0.81
RABGGTA-206ENST00000558649 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
RABGGTA-206ENST00000558649 NUPR1O60356 82 aa9.99□□□□□ -0.81
RABGGTA-206ENST00000558649 ZNF22P17026 224 aaPredicted RBP9.99□□□□□ -0.81
RABGGTA-206ENST00000558649 Q6ZRP5 223 aa9.99□□□□□ -0.81
RABGGTA-206ENST00000558649 C7orf33Q8WU49 177 aa9.99□□□□□ -0.81
RABGGTA-206ENST00000558649 FAT1Q14517 4588 aa9.99□□□□□ -0.81
RABGGTA-206ENST00000558649 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
RABGGTA-206ENST00000558649 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
RABGGTA-206ENST00000558649 F8VRH5 84 aa9.97□□□□□ -0.81
RABGGTA-206ENST00000558649 LEPROTL1O95214 131 aa9.97□□□□□ -0.81
RABGGTA-206ENST00000558649 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
RABGGTA-206ENST00000558649 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 A0A1W2PNN7 141 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BKO60814 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BJP06899 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 FABP4P15090 132 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BOP23527 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BBP33778 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 CXCL5P42830 114 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BDP58876 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BCP62807 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST2H2BEQ16778 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BHQ93079 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BNQ99877 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 HIST1H2BMQ99879 126 aa9.96□□□□□ -0.82
RABGGTA-206ENST00000558649 ATP6V1G1O75348 118 aa9.95□□□□□ -0.82
RABGGTA-206ENST00000558649 SRRM2Q9UQ35 2752 aaKnown RBP9.94□□□□□ -0.82
RABGGTA-206ENST00000558649 FAM168BA1KXE4 195 aa9.94□□□□□ -0.82
RABGGTA-206ENST00000558649 FAM19A5Q7Z5A7 132 aaPredicted RBP9.94□□□□□ -0.82
RABGGTA-206ENST00000558649 VPS13BQ7Z7G8 4022 aa9.93□□□□□ -0.82
RABGGTA-206ENST00000558649 HSPB8Q9UJY1 196 aa9.93□□□□□ -0.82
RABGGTA-206ENST00000558649 IGLV5-39A0A0G2JS06 123 aa9.92□□□□□ -0.82
RABGGTA-206ENST00000558649 S100A1P23297 94 aa9.92□□□□□ -0.82
RABGGTA-206ENST00000558649 ODF1Q14990 250 aa9.91□□□□□ -0.82
RABGGTA-206ENST00000558649 C9orf129Q5T035 196 aaKnown RBP9.91□□□□□ -0.82
RABGGTA-206ENST00000558649 PHF5AQ7RTV0 110 aaKnown RBP9.91□□□□□ -0.82
RABGGTA-206ENST00000558649 XAGE1AQ9HD64 81 aa9.91□□□□□ -0.82
RABGGTA-206ENST00000558649 HNRNPA3P51991 378 aaKnown RBP9.9□□□□□ -0.82
RABGGTA-206ENST00000558649 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
RABGGTA-206ENST00000558649 PRR3P79522 188 aaKnown RBP9.89□□□□□ -0.83
RABGGTA-206ENST00000558649 PMCHL2Q9BQD1 86 aa9.89□□□□□ -0.83
RABGGTA-206ENST00000558649 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
RABGGTA-206ENST00000558649 M0QXV9 152 aa9.87□□□□□ -0.83
RABGGTA-206ENST00000558649 PFN2P35080 140 aa9.87□□□□□ -0.83
RABGGTA-206ENST00000558649 MAP1LC3CQ9BXW4 147 aa9.87□□□□□ -0.83
RABGGTA-206ENST00000558649 KRTAP7-1Q8IUC3 87 aa9.86□□□□□ -0.83
RABGGTA-206ENST00000558649 PLNP26678 52 aa9.85□□□□□ -0.83
RABGGTA-206ENST00000558649 SERTAD4-AS1Q5TG53 156 aa9.85□□□□□ -0.83
RABGGTA-206ENST00000558649 DPM2O94777 84 aa9.84□□□□□ -0.83
RABGGTA-206ENST00000558649 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
RABGGTA-206ENST00000558649 UBE2BP63146 152 aa9.83□□□□□ -0.84
RABGGTA-206ENST00000558649 PSORS1C2Q9UIG4 136 aa9.83□□□□□ -0.84
RABGGTA-206ENST00000558649 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
RABGGTA-206ENST00000558649 IGKCP01834 107 aa9.82□□□□□ -0.84
RABGGTA-206ENST00000558649 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
RABGGTA-206ENST00000558649 SYS1-DBNDD2H3BUS1 97 aa9.81□□□□□ -0.84
RABGGTA-206ENST00000558649 C1orf137Q5JT78 98 aa9.81□□□□□ -0.84
RABGGTA-206ENST00000558649 A0A0U1RRA0 63 aa9.8□□□□□ -0.84
RABGGTA-206ENST00000558649 J3QL48 77 aa9.8□□□□□ -0.84
RABGGTA-206ENST00000558649 COA6Q5JTJ3 125 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-206ENST00000558649 KRTAP11-1Q8IUC1 163 aa9.8□□□□□ -0.84
RABGGTA-206ENST00000558649 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
RABGGTA-206ENST00000558649 LINC00158P58513 81 aa9.79□□□□□ -0.84
RABGGTA-206ENST00000558649 HERVK_113P61574 105 aa9.79□□□□□ -0.84
RABGGTA-206ENST00000558649 LEPROTO15243 131 aa9.78□□□□□ -0.84
RABGGTA-206ENST00000558649 TSPEAR-AS2P59090 65 aa9.78□□□□□ -0.84
RABGGTA-206ENST00000558649 KRTDAPP60985 99 aa9.78□□□□□ -0.84
RABGGTA-206ENST00000558649 COX17Q14061 63 aa9.78□□□□□ -0.84
RABGGTA-206ENST00000558649 MEIG1Q5JSS6 88 aa9.78□□□□□ -0.84
RABGGTA-206ENST00000558649 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
RABGGTA-206ENST00000558649 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
RABGGTA-206ENST00000558649 NKAPP1Q8N9T2 125 aa9.77□□□□□ -0.85
RABGGTA-206ENST00000558649 PLEKHB2Q96CS7 222 aa9.77□□□□□ -0.85
RABGGTA-206ENST00000558649 GAGE10A6NGK3 116 aa9.76□□□□□ -0.85
RABGGTA-206ENST00000558649 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-206ENST00000558649 C3orf79P0CE67 100 aa9.76□□□□□ -0.85
RABGGTA-206ENST00000558649 SMIM13P0DJ93 91 aa9.76□□□□□ -0.85
RABGGTA-206ENST00000558649 LBHQ53QV2 105 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-206ENST00000558649 MRPL55Q7Z7F7 128 aaKnown RBP9.76□□□□□ -0.85
RABGGTA-206ENST00000558649 MYCBP2O75592 4640 aa9.75□□□□□ -0.85
RABGGTA-206ENST00000558649 MYMXA0A1B0GTQ4 84 aa9.75□□□□□ -0.85
RABGGTA-206ENST00000558649 J3QQQ9 107 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms