RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 RPS10P5Q9NQ39 176 aa7.63□□□□□ -1.19
CDC42BPB-202ENST00000558321 PKHD1L1Q86WI1 4243 aa7.63□□□□□ -1.19
CDC42BPB-202ENST00000558321 RHEBQ15382 184 aa7.62□□□□□ -1.19
CDC42BPB-202ENST00000558321 FA2HQ7L5A8 372 aa7.62□□□□□ -1.19
CDC42BPB-202ENST00000558321 FAM19A3Q7Z5A8 133 aa7.62□□□□□ -1.19
CDC42BPB-202ENST00000558321 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
CDC42BPB-202ENST00000558321 CDKN2A-AS1Q9UH64 79 aa7.62□□□□□ -1.19
CDC42BPB-202ENST00000558321 LINC01549A6NIU2 74 aa7.61□□□□□ -1.19
CDC42BPB-202ENST00000558321 UBE2BP63146 152 aa7.61□□□□□ -1.19
CDC42BPB-202ENST00000558321 Q8IZM0 81 aa7.61□□□□□ -1.19
CDC42BPB-202ENST00000558321 SMCO4Q9NRQ5 59 aa7.61□□□□□ -1.19
CDC42BPB-202ENST00000558321 C10orf91Q5T1B1 145 aa7.6□□□□□ -1.19
CDC42BPB-202ENST00000558321 LINC00469Q8N7U9 141 aa7.6□□□□□ -1.19
CDC42BPB-202ENST00000558321 M0QXV9 152 aa7.59□□□□□ -1.19
CDC42BPB-202ENST00000558321 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.19
CDC42BPB-202ENST00000558321 TINCRA0A1B0GVN0 87 aa7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 LINC01546A6NGU7 62 aa7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 F8VRH5 84 aa7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 C9orf129Q5T035 196 aaKnown RBP7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
CDC42BPB-202ENST00000558321 PMVKQ15126 192 aa7.57□□□□□ -1.2
CDC42BPB-202ENST00000558321 KRTAP11-1Q8IUC1 163 aa7.57□□□□□ -1.2
CDC42BPB-202ENST00000558321 TRAPPC1Q9Y5R8 145 aa7.57□□□□□ -1.2
CDC42BPB-202ENST00000558321 CXCL5P42830 114 aa7.56□□□□□ -1.2
CDC42BPB-202ENST00000558321 NDUFA6P56556 154 aa7.56□□□□□ -1.2
CDC42BPB-202ENST00000558321 PDZD11Q5EBL8 140 aa7.56□□□□□ -1.2
CDC42BPB-202ENST00000558321 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
CDC42BPB-202ENST00000558321 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
CDC42BPB-202ENST00000558321 XAGE1AQ9HD64 81 aa7.56□□□□□ -1.2
CDC42BPB-202ENST00000558321 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
CDC42BPB-202ENST00000558321 APOC3P02656 99 aa7.55□□□□□ -1.2
CDC42BPB-202ENST00000558321 ODF1Q14990 250 aa7.55□□□□□ -1.2
CDC42BPB-202ENST00000558321 NDUFA5Q16718 116 aa7.55□□□□□ -1.2
CDC42BPB-202ENST00000558321 SPINK8P0C7L1 97 aa7.54□□□□□ -1.2
CDC42BPB-202ENST00000558321 LINC00614P0C842 121 aa7.54□□□□□ -1.2
CDC42BPB-202ENST00000558321 LBHQ53QV2 105 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPB-202ENST00000558321 C22orf24Q9Y442 160 aa7.54□□□□□ -1.2
CDC42BPB-202ENST00000558321 IGLV5-45A0A087WSX0 123 aa7.53□□□□□ -1.2
CDC42BPB-202ENST00000558321 H3BRM9 83 aa7.53□□□□□ -1.2
CDC42BPB-202ENST00000558321 H0Y9J4 135 aa7.52□□□□□ -1.21
CDC42BPB-202ENST00000558321 SNAPINO95295 136 aa7.52□□□□□ -1.21
CDC42BPB-202ENST00000558321 RAB5BP61020 215 aa7.52□□□□□ -1.21
CDC42BPB-202ENST00000558321 SVBPQ8N300 66 aa7.52□□□□□ -1.21
CDC42BPB-202ENST00000558321 C18orf32Q8TCD1 76 aa7.52□□□□□ -1.21
CDC42BPB-202ENST00000558321 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
CDC42BPB-202ENST00000558321 PMCHL1Q16048 86 aa7.51□□□□□ -1.21
CDC42BPB-202ENST00000558321 ATP5LO75964 103 aa7.5□□□□□ -1.21
CDC42BPB-202ENST00000558321 HBDP02042 147 aa7.5□□□□□ -1.21
CDC42BPB-202ENST00000558321 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
CDC42BPB-202ENST00000558321 A0A096LNJ9 63 aa7.49□□□□□ -1.21
CDC42BPB-202ENST00000558321 MRPL55Q7Z7F7 128 aaKnown RBP7.49□□□□□ -1.21
CDC42BPB-202ENST00000558321 URB1-AS1Q96HZ7 61 aa7.49□□□□□ -1.21
CDC42BPB-202ENST00000558321 NUPR1O60356 82 aa7.48□□□□□ -1.21
CDC42BPB-202ENST00000558321 IGLC3P0DOY3 106 aa7.48□□□□□ -1.21
CDC42BPB-202ENST00000558321 BAGE3Q86Y29 109 aa7.48□□□□□ -1.21
CDC42BPB-202ENST00000558321 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
CDC42BPB-202ENST00000558321 ZNF861PO60384 105 aa7.47□□□□□ -1.21
CDC42BPB-202ENST00000558321 PFN2P35080 140 aa7.47□□□□□ -1.21
CDC42BPB-202ENST00000558321 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
CDC42BPB-202ENST00000558321 GAGE10A6NGK3 116 aa7.46□□□□□ -1.22
CDC42BPB-202ENST00000558321 RPL37AP8A6NKH3 93 aa7.46□□□□□ -1.22
CDC42BPB-202ENST00000558321 ZNF22P17026 224 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPB-202ENST00000558321 TMEM170BQ5T4T1 132 aa7.46□□□□□ -1.22
CDC42BPB-202ENST00000558321 NKAPP1Q8N9T2 125 aa7.46□□□□□ -1.22
CDC42BPB-202ENST00000558321 LINC00167Q96N53 147 aa7.46□□□□□ -1.22
CDC42BPB-202ENST00000558321 IGLV5-39A0A0G2JS06 123 aa7.45□□□□□ -1.22
CDC42BPB-202ENST00000558321 RPL28P46779 137 aaKnown RBP7.45□□□□□ -1.22
CDC42BPB-202ENST00000558321 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
CDC42BPB-202ENST00000558321 BCE1O60756 84 aa7.44□□□□□ -1.22
CDC42BPB-202ENST00000558321 ZNF625Q96I27 306 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPB-202ENST00000558321 CHTOPQ9Y3Y2 248 aaKnown RBP7.44□□□□□ -1.22
CDC42BPB-202ENST00000558321 TNXBP22105 4242 aa7.44□□□□□ -1.22
CDC42BPB-202ENST00000558321 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
CDC42BPB-202ENST00000558321 RPL13AP40429 203 aaKnown RBP7.43□□□□□ -1.22
CDC42BPB-202ENST00000558321 CHCHD1Q96BP2 118 aaKnown RBP7.43□□□□□ -1.22
CDC42BPB-202ENST00000558321 ERG28Q9UKR5 140 aa7.43□□□□□ -1.22
CDC42BPB-202ENST00000558321 IGLV5-37A0A075B6J1 123 aa7.42□□□□□ -1.22
CDC42BPB-202ENST00000558321 YPEL4Q96NS1 127 aa7.42□□□□□ -1.22
CDC42BPB-202ENST00000558321 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
CDC42BPB-202ENST00000558321 COX17Q14061 63 aa7.41□□□□□ -1.22
CDC42BPB-202ENST00000558321 SFTA2Q6UW10 78 aa7.41□□□□□ -1.22
CDC42BPB-202ENST00000558321 IFI27L1Q96BM0 104 aa7.41□□□□□ -1.22
CDC42BPB-202ENST00000558321 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
CDC42BPB-202ENST00000558321 IGKV2-28A0A075B6P5 120 aa7.4□□□□□ -1.22
CDC42BPB-202ENST00000558321 SCO1O75880 301 aa7.4□□□□□ -1.22
CDC42BPB-202ENST00000558321 IGKV2D-28P01615 120 aa7.4□□□□□ -1.22
CDC42BPB-202ENST00000558321 UBE2AP49459 152 aa7.4□□□□□ -1.22
CDC42BPB-202ENST00000558321 RPL24P83731 157 aaKnown RBP7.4□□□□□ -1.22
CDC42BPB-202ENST00000558321 CBLN2Q8IUK8 224 aa7.4□□□□□ -1.22
CDC42BPB-202ENST00000558321 TRAV12-1A0A0B4J245 112 aa7.39□□□□□ -1.23
CDC42BPB-202ENST00000558321 HSBP1O75506 76 aa7.39□□□□□ -1.23
CDC42BPB-202ENST00000558321 LINC00158P58513 81 aa7.39□□□□□ -1.23
CDC42BPB-202ENST00000558321 SMCPP49901 116 aaPredicted RBP7.38□□□□□ -1.23
CDC42BPB-202ENST00000558321 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
CDC42BPB-202ENST00000558321 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
CDC42BPB-202ENST00000558321 ATP6V1G1O75348 118 aa7.37□□□□□ -1.23
CDC42BPB-202ENST00000558321 VPREB1P12018 145 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 339.3 ms