RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 C1orf137Q5JT78 98 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 WDR87Q6ZQQ6 2873 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 LOC110117498A0A087WWA1 95 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 Q6YL49 198 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 FHL3Q13643 280 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 ATRQ13535 2644 aa2.61□□□□□ -1.99
ATXN3-248ENST00000558190 HELZP42694 1942 aaKnown RBP2.6□□□□□ -1.99
ATXN3-248ENST00000558190 SCN10AQ9Y5Y9 1956 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 THSD7AQ9UPZ6 1657 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 IGFL2Q6UWQ7 119 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.6□□□□□ -1.99
ATXN3-248ENST00000558190 TRBV7-4A0A0J9YYF1 115 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 FSHBP01225 129 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 IGKV2-28A0A075B6P5 120 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 IGKV2D-28P01615 120 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 SPINK6Q6UWN8 80 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 TMEM131Q92545 1883 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 C18orf65Q6ZTR6 163 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 BRI3O95415 125 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 ODF3BA8MYP8 253 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 FASNP49327 2511 aaKnown RBP2.6□□□□□ -1.99
ATXN3-248ENST00000558190 Q6ZTC4 211 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 X6R8D5 127 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 PLXND1Q9Y4D7 1925 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 SMIM1B2RUZ4 78 aa2.6□□□□□ -1.99
ATXN3-248ENST00000558190 H0Y9P7 68 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 LCA10Q71F78 164 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 LCTP09848 1927 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 IGLV8-61A0A075B6I0 122 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 CDSNQ15517 529 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 LYPD5Q6UWN5 251 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 PIEZO2Q9H5I5 2752 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 STAB1Q9NY15 2570 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 A0A1B0GU69 56 aa2.59□□□□□ -1.99
ATXN3-248ENST00000558190 PIP4P1Q86T03 277 aa2.59□□□□□ -2
ATXN3-248ENST00000558190 ZSWIM8A7E2V4 1837 aa2.59□□□□□ -2
ATXN3-248ENST00000558190 C11orf45Q8TAV5 145 aa2.59□□□□□ -2
ATXN3-248ENST00000558190 KIAA1671Q9BY89 1806 aa2.59□□□□□ -2
ATXN3-248ENST00000558190 TCF20Q9UGU0 1960 aaKnown RBP2.59□□□□□ -2
ATXN3-248ENST00000558190 Q96MF0 132 aa2.59□□□□□ -2
ATXN3-248ENST00000558190 CYP4F30PQ9H0H9 118 aa2.59□□□□□ -2
ATXN3-248ENST00000558190 EGFEM1PQ0D2K5 195 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 ERC2-IT1O76042 136 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 GREB1LQ9C091 1923 aaPredicted RBP2.58□□□□□ -2
ATXN3-248ENST00000558190 DENND4AQ7Z401 1863 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 C19orf84I3L1E1 186 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 SSBP3-AS1Q7Z2R9 100 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 C4orf3Q8WVX3 66 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 Q8IZM0 81 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 IGHV3OR16-9A0A0B4J2B5 98 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 Q9BRP9 147 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 SIPA1L1O43166 1804 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 Q6ZQT0 140 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 H7BZZ5 65 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 ZNF706Q9Y5V0 76 aaPredicted RBP2.58□□□□□ -2
ATXN3-248ENST00000558190 STRCP1A6NGW2 1772 aa2.58□□□□□ -2
ATXN3-248ENST00000558190 A0A1B0GUV1 79 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 IGLV1-40P01703 118 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 RBM12B-AS1Q9P1G2 102 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 LITAFQ99732 161 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 LELP1Q5T871 98 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 DEFB135Q30KP9 77 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 SPINT4Q6UDR6 99 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 C11orf72Q8NBR9 251 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 VWA8A3KMH1 1905 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
ATXN3-248ENST00000558190 RLFQ13129 1914 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 A0A087WSZ3 146 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 C22orf24Q9Y442 160 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 PRLHP81277 87 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 H3BS24 57 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 TP53AIP1Q9HCN2 124 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 PLA2G2CQ5R387 149 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 C9orf66Q5T8R8 295 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 AVPP01185 164 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 REG3GQ6UW15 175 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 PLXNB3Q9ULL4 1909 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 LOC101927531A0A1B0GV80 90 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.56□□□□□ -2
ATXN3-248ENST00000558190 IGLV9-49A0A0B4J1Y8 123 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 ANKRD17O75179 2603 aaKnown RBP2.56□□□□□ -2
ATXN3-248ENST00000558190 DEFB131BA0A096LNP1 70 aa2.56□□□□□ -2
ATXN3-248ENST00000558190 FNDC1Q4ZHG4 1894 aaPredicted RBP2.56□□□□□ -2
ATXN3-248ENST00000558190 RPL37AP61513 92 aaKnown RBP2.55□□□□□ -2
ATXN3-248ENST00000558190 Q1T7F1 81 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 PLXNA3P51805 1871 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 A0A0G2JQZ4 141 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 A0A1W2PNN7 141 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 ZNF575Q86XF7 245 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 ELOF1P60002 83 aaKnown RBP2.55□□□□□ -2
ATXN3-248ENST00000558190 C2orf16Q68DN1 1984 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 Q5XG85 94 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 SMIM29Q86T20 159 aa2.55□□□□□ -2
ATXN3-248ENST00000558190 PLA2G1BP04054 148 aaKnown RBP2.54□□□□□ -2
ATXN3-248ENST00000558190 ADORA2A-AS1P86434 159 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 C11orf71Q6IPW1 123 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 C7orf33Q8WU49 177 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 FLNBO75369 2602 aaKnown RBP2.54□□□□□ -2
ATXN3-248ENST00000558190 M0R2N4 97 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 A0A1B0GW54 56 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms