RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 TRAV8-4A0A0B4J246 113 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 A0A1B0GXF2 115 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 XCL1P47992 114 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
ATXN3-243ENST00000556671 HAMPP81172 84 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 WFDC2Q14508 124 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 ZNF664Q8N3J9 261 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 CHCHD10Q8WYQ3 142 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-243ENST00000556671 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
ATXN3-243ENST00000556671 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 C20orf202A1L168 122 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 CCL25O15444 150 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-243ENST00000556671 ZNF25P17030 456 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-243ENST00000556671 IFI27P40305 119 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-243ENST00000556671 XGP55808 180 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 KRTAP10-1P60331 282 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 HIGD2BQ4VC39 106 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 Q8N8P6 123 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 C2orf48Q96LS8 159 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 DNAH1Q9P2D7 4330 aa3.04□□□□□ -1.92
ATXN3-243ENST00000556671 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 Q6ZVQ6 151 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 C5orf38Q86SI9 138 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 LINC00526Q96FQ7 95 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 VCX2Q9H322 139 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 RYR2Q92736 4967 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
ATXN3-243ENST00000556671 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.93
ATXN3-243ENST00000556671 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-243ENST00000556671 LINC00614P0C842 121 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 G0S2P27469 103 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 ORMDL2Q53FV1 153 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 PDZD11Q5EBL8 140 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 Q6ZN92 141 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 Q6ZRP5 223 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 Q6ZUT4 128 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 MIEN1Q9BRT3 115 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 NXT2Q9NPJ8 142 aaKnown RBP3.02□□□□□ -1.93
ATXN3-243ENST00000556671 CYSLTR1Q9Y271 337 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 LAMTOR2Q9Y2Q5 125 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 DNAH6Q9C0G6 4158 aa3.02□□□□□ -1.93
ATXN3-243ENST00000556671 COX7A2LO14548 114 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 APOMO95445 188 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 RPL32P62910 135 aaKnown RBP3.01□□□□□ -1.93
ATXN3-243ENST00000556671 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 C2orf66Q6UXQ4 117 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 TMEM141Q96I45 108 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 FAM218AQ96MZ4 157 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 VAMP8Q9BV40 100 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 TIMM21Q9BVV7 248 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 SPANXA1Q9NS26 97 aa3.01□□□□□ -1.93
ATXN3-243ENST00000556671 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 IGHV1-58A0A0C4DH39 117 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 IGKV2-24A0A0C4DH68 120 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 A0A1B0GV90 55 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 EPM2AB3EWF7 344 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 CHCHD1Q96BP2 118 aaKnown RBP3□□□□□ -1.93
ATXN3-243ENST00000556671 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
ATXN3-243ENST00000556671 TOMM7Q9P0U1 55 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 UQCR10Q9UDW1 63 aa3□□□□□ -1.93
ATXN3-243ENST00000556671 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
ATXN3-243ENST00000556671 IGLV4-69A0A075B6H9 119 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 IGLV4-3A0A075B6K6 122 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 A0A0J9YXV3 536 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 SERF1AO75920 110 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 KRTAP12-2P59991 146 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 MRPS36P82909 103 aaKnown RBP2.99□□□□□ -1.93
ATXN3-243ENST00000556671 COX6A2Q02221 97 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 C15orf56Q8N910 161 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 C9orf163Q8N9P6 203 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 SNHG12Q9BXW3 62 aa2.99□□□□□ -1.93
ATXN3-243ENST00000556671 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 H0Y8G0 127 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-243ENST00000556671 K7EMI3 77 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 DLEU1O43261 78 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 CHTF8P0CG12 524 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 SPAG11BQ08648 103 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 C6orf226Q5I0X4 101 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
ATXN3-243ENST00000556671 C18orf32Q8TCD1 76 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms