RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MGST2Q99735 147 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 SMDT1Q9H4I9 107 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 NAA60Q9H7X0 242 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 C8orf4Q9NR00 106 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 PSENENQ9NZ42 101 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 ALG5Q9Y673 324 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 PXMP4Q9Y6I8 212 aa0.62□□□□□ -2.31
PRPF39-208ENST00000554785 TRAV21A0A0B4J279 112 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 CCL25O15444 150 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 HPGDSO60760 199 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 NBEAP1P0C6P0 100 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 PET100P0DJ07 73 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 CXCL2P19875 107 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 CSN1S1P47710 185 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 NKX2-5P52952 324 aaPredicted RBP0.61□□□□□ -2.31
PRPF39-208ENST00000554785 AQP4P55087 323 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2D2P62837 147 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 NEDD8Q15843 81 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 FAM229BQ4G0N7 80 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 Q6AWC8 147 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 Q86TA4 180 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 Q8NDZ9 215 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 OR5A1Q8NGJ0 315 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 STOML3Q8TAV4 291 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 S100A16Q96FQ6 103 aaKnown RBP0.61□□□□□ -2.31
PRPF39-208ENST00000554785 MED28Q9H204 178 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 NDUFB11Q9NX14 153 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 SCN3BQ9NY72 215 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 IL36BQ9NZH7 164 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 GSKIPQ9P0R6 139 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 LSM5Q9Y4Y9 91 aaKnown RBP0.61□□□□□ -2.31
PRPF39-208ENST00000554785 FLGP20930 4061 aaPredicted RBP0.61□□□□□ -2.31
PRPF39-208ENST00000554785 IGKV2D-26A0A0A0MRZ7 120 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 TRAV1-2A0A0B4J238 106 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 TRBV10-1A0A0K0K1A3 114 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 TRBV6-1A0A0K0K1D8 114 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 RBAKDNA6NC62 111 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 A8MWV9 139 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 APOMO95445 188 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 ATP6V1G2O95670 118 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 CFDP00746 253 aaPredicted RBP0.61□□□□□ -2.31
PRPF39-208ENST00000554785 ARMS2P0C7Q2 107 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 ESDP10768 282 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 FGF7P21781 194 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 ATP6V0CP27449 155 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 S100A7P31151 101 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 SMAGPQ0VAQ4 97 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 RASL11AQ6T310 242 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 C5orf38Q86SI9 138 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.61□□□□□ -2.31
PRPF39-208ENST00000554785 OR10AG1Q8NH19 301 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 TSKUQ8WUA8 353 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 AQP10Q96PS8 301 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 ODF3Q96PU9 254 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 EIF5A2Q9GZV4 153 aaKnown RBP0.61□□□□□ -2.31
PRPF39-208ENST00000554785 C11orf1Q9H5F2 150 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 XAGE1AQ9HD64 81 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 LINC00474Q9P2X8 69 aa0.61□□□□□ -2.31
PRPF39-208ENST00000554785 GVQW2A0A096LPI5 108 aaPredicted RBP0.6□□□□□ -2.31
PRPF39-208ENST00000554785 TRAV13-1A0A0B4J241 112 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 IGHV1-24A0A0C4DH33 117 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 LOC107984640A0A0U1RRK4 108 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 SMIM31A0A1B0GVY4 71 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 TRDV1A0A1B0GX56 115 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 C19orf71A6NCJ1 209 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 MT1FP04733 61 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 FGF6P10767 208 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 SLC25A6P12236 298 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 TPT1P13693 172 aaKnown RBP0.6□□□□□ -2.31
PRPF39-208ENST00000554785 RPL12P30050 165 aaKnown RBP0.6□□□□□ -2.31
PRPF39-208ENST00000554785 H2BFSP57053 126 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 LINC00313P59037 77 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 TSPEAR-AS2P59090 65 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 VBP1P61758 197 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 SPAG11BQ08648 103 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 GUK1Q16774 197 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 C4orf26Q17RF5 130 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 SPANXN1Q5VSR9 72 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 C2orf82Q6UX34 121 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 HRCT1Q6UXD1 115 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 LHFPL1Q86WI0 220 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 CLVS1Q8IUQ0 354 aaPredicted RBP0.6□□□□□ -2.31
PRPF39-208ENST00000554785 NUP35Q8NFH5 326 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 TERB2Q8NHR7 220 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 MCFD2Q8NI22 146 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 PFDN5Q99471 154 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 ZNF471Q9BX82 626 aaPredicted RBP0.6□□□□□ -2.31
PRPF39-208ENST00000554785 GNB1LQ9BYB4 327 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 SH3BGRL3Q9H299 93 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 OR5AC2Q9NZP5 309 aa0.6□□□□□ -2.31
PRPF39-208ENST00000554785 A0A1B0GV50 99 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 FNDC10F2Z333 226 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 H7C2G1 150 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 LINC00614P0C842 121 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 SMIM17P0DL12 118 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 GZMBP10144 247 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 TMBIM6P55061 237 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2G2P60604 165 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 NCS1P62166 190 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 HERVK_113P63121 156 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms