RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
SLIRP-202ENST00000553981 USH2AO75445 5202 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 TRBV27A0A0K0K1C4 114 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 COX7A2LO14548 114 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 IFNA1P01562 189 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 S100A9P06702 114 aaKnown RBP1.74□□□□□ -2.13
SLIRP-202ENST00000553981 TRGC1P0CF51 173 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 ZNF25P17030 456 aaPredicted RBP1.74□□□□□ -2.13
SLIRP-202ENST00000553981 UBE2D1P51668 147 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 EIF5AP63241 154 aaKnown RBP1.74□□□□□ -2.13
SLIRP-202ENST00000553981 ASB16-AS1Q495Z4 193 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 LINC00299Q6ZSB3 139 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 TYMSOSQ8TAI1 123 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 ORAOV1Q8WV07 137 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 S100ZQ8WXG8 99 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 LINC00167Q96N53 147 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 TCEAL7Q9BRU2 100 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 PPDPFQ9H3Y8 114 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 GNG13Q9P2W3 67 aa1.74□□□□□ -2.13
SLIRP-202ENST00000553981 BORCS7-ASMTA0A0B4J1R7 106 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 TRAV1-1A0A0B4J248 108 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 C7orf77A4D0Y5 90 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 RPL37AP8A6NKH3 93 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 F2Z2F3 143 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 RPS20P60866 119 aaKnown RBP1.73□□□□□ -2.13
SLIRP-202ENST00000553981 EIF5AL1Q6IS14 154 aaKnown RBP1.73□□□□□ -2.13
SLIRP-202ENST00000553981 LINC00173Q6ZV60 143 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.73□□□□□ -2.13
SLIRP-202ENST00000553981 MRAP2Q96G30 205 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 XAGE1AQ9HD64 81 aa1.73□□□□□ -2.13
SLIRP-202ENST00000553981 CSDC2Q9Y534 153 aaKnown RBP1.73□□□□□ -2.13
SLIRP-202ENST00000553981 IGLV4-3A0A075B6K6 122 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 C1orf196B1AJZ1 125 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 TCAPO15273 167 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 RPL13AP40429 203 aaKnown RBP1.72□□□□□ -2.13
SLIRP-202ENST00000553981 GNG4P50150 75 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 UBE2BP63146 152 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 MRPL51Q4U2R6 128 aaKnown RBP1.72□□□□□ -2.13
SLIRP-202ENST00000553981 OR10D4PQ8NGN7 298 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 TSKUQ8WUA8 353 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 ISOC2Q96AB3 205 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 TMEM101Q96IK0 257 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 BTF3L4Q96K17 158 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 TMEM191AQ9H0A3 160 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 ST20Q9HBF5 79 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 MED9Q9NWA0 146 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 NDUFA13Q9P0J0 144 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 V9GYV3 84 aa1.72□□□□□ -2.13
SLIRP-202ENST00000553981 ZNF727A8MUV8 499 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 C9JQL5 133 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 NDUFC2-KCTD14E9PQ53 114 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 KRTAP4-16G5E9R7 235 aaPredicted RBP1.71□□□□□ -2.14
SLIRP-202ENST00000553981 NDUFA1O15239 70 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 GATCO43716 136 aaKnown RBP1.71□□□□□ -2.14
SLIRP-202ENST00000553981 NUPR1O60356 82 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 BCE1O60756 84 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 PFDN1O60925 122 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 NPYP01303 97 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 CRYGAP11844 174 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 PRLHP81277 87 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 ZNF345Q14585 488 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 FAM231DQ6ZW35 169 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 DAND5Q8N907 189 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 LINC00304Q8N9R0 145 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 SMIM12Q96EX1 92 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 IMMP2LQ96T52 175 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 TIMM21Q9BVV7 248 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
SLIRP-202ENST00000553981 TRBV30A0A0K0K1B3 111 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 HMSDA8MTL9 139 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 HIGD1CA8MV81 97 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 UMAD1C9J7I0 102 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 TMEM238C9JI98 176 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 RPL32P62910 135 aaKnown RBP1.7□□□□□ -2.14
SLIRP-202ENST00000553981 MRPS36P82909 103 aaKnown RBP1.7□□□□□ -2.14
SLIRP-202ENST00000553981 TMEM241Q24JQ0 296 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 FAM104BQ5XKR9 115 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 MRPL55Q7Z7F7 128 aaKnown RBP1.7□□□□□ -2.14
SLIRP-202ENST00000553981 LINC01551Q86U37 167 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 PLEKHB2Q96CS7 222 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 AMELXQ99217 191 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 MANBALQ9NQG1 85 aa1.7□□□□□ -2.14
SLIRP-202ENST00000553981 TRBV24-1A0A075B6N3 115 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 A0A1B0GUT8 65 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 A0A1B0GXF2 115 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 XKRY2A2RUG3 117 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 C5orf52A6NGY3 159 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 F8WDY8 70 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 M0R378 163 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 FAM229BQ4G0N7 80 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 FAM19A3Q7Z5A8 133 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 PACRGQ96M98 296 aaPredicted RBP1.69□□□□□ -2.14
SLIRP-202ENST00000553981 CDKN2A-AS1Q9UH64 79 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 PKIGQ9Y2B9 76 aa1.69□□□□□ -2.14
SLIRP-202ENST00000553981 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
SLIRP-202ENST00000553981 IGKV2-28A0A075B6P5 120 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 IGIPA6NJ69 53 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 A8MWL6 223 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 D6R8Y8 96 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms