RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PMCHL2Q9BQD1 86 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 CDKN2A-AS1Q9UH64 79 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 IGLV4-69A0A075B6H9 119 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 GVQW2A0A096LPI5 108 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-218ENST00000552839 IGKCP01834 107 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 AKR1D1P51857 326 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 CKS1BP61024 79 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 SERTAD4-AS1Q5TG53 156 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 LINC01561Q8N1V8 128 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 CAMK2N2Q96S95 79 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 HIST1H2BLQ99880 126 aa7.44□□□□□ -1.22
TMEM116-218ENST00000552839 C3orf79P0CE67 100 aa7.43□□□□□ -1.22
TMEM116-218ENST00000552839 ZNF22P17026 224 aaPredicted RBP7.43□□□□□ -1.22
TMEM116-218ENST00000552839 PKIGQ9Y2B9 76 aa7.43□□□□□ -1.22
TMEM116-218ENST00000552839 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
TMEM116-218ENST00000552839 IGLV5-45A0A087WSX0 123 aa7.42□□□□□ -1.22
TMEM116-218ENST00000552839 C5orf52A6NGY3 159 aa7.42□□□□□ -1.22
TMEM116-218ENST00000552839 NDUFA1O15239 70 aa7.42□□□□□ -1.22
TMEM116-218ENST00000552839 C6orf226Q5I0X4 101 aa7.42□□□□□ -1.22
TMEM116-218ENST00000552839 CARD19Q96LW7 228 aa7.42□□□□□ -1.22
TMEM116-218ENST00000552839 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
TMEM116-218ENST00000552839 PLA2G1BP04054 148 aaKnown RBP7.41□□□□□ -1.22
TMEM116-218ENST00000552839 CXCL5P42830 114 aa7.41□□□□□ -1.22
TMEM116-218ENST00000552839 SYCNQ0VAF6 134 aa7.41□□□□□ -1.22
TMEM116-218ENST00000552839 COX7B2Q8TF08 81 aa7.41□□□□□ -1.22
TMEM116-218ENST00000552839 LINC00526Q96FQ7 95 aa7.41□□□□□ -1.22
TMEM116-218ENST00000552839 SCGB1D1O95968 90 aa7.4□□□□□ -1.22
TMEM116-218ENST00000552839 LINC01545Q5VT33 79 aa7.4□□□□□ -1.22
TMEM116-218ENST00000552839 Q8IZM0 81 aa7.4□□□□□ -1.22
TMEM116-218ENST00000552839 C2orf48Q96LS8 159 aa7.4□□□□□ -1.22
TMEM116-218ENST00000552839 HSBP1L1C9JCN9 74 aa7.39□□□□□ -1.23
TMEM116-218ENST00000552839 F8WDY8 70 aa7.39□□□□□ -1.23
TMEM116-218ENST00000552839 LINC00528Q8N1L1 170 aa7.39□□□□□ -1.23
TMEM116-218ENST00000552839 TMEM223A0PJW6 202 aa7.38□□□□□ -1.23
TMEM116-218ENST00000552839 LGALS3P17931 250 aaKnown RBP7.38□□□□□ -1.23
TMEM116-218ENST00000552839 CNBPP62633 177 aaKnown RBP7.38□□□□□ -1.23
TMEM116-218ENST00000552839 Q6ZSA8 131 aa7.37□□□□□ -1.23
TMEM116-218ENST00000552839 PLEKHB2Q96CS7 222 aa7.37□□□□□ -1.23
TMEM116-218ENST00000552839 PLA2G2DQ9UNK4 145 aa7.37□□□□□ -1.23
TMEM116-218ENST00000552839 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
TMEM116-218ENST00000552839 SFTA2Q6UW10 78 aa7.36□□□□□ -1.23
TMEM116-218ENST00000552839 Q6ZRU5 148 aa7.36□□□□□ -1.23
TMEM116-218ENST00000552839 ATOH7Q8N100 152 aa7.36□□□□□ -1.23
TMEM116-218ENST00000552839 HMCN2Q8NDA2 5059 aa7.36□□□□□ -1.23
TMEM116-218ENST00000552839 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
TMEM116-218ENST00000552839 LEPROTO15243 131 aa7.35□□□□□ -1.23
TMEM116-218ENST00000552839 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
TMEM116-218ENST00000552839 DPH3Q96FX2 82 aa7.35□□□□□ -1.23
TMEM116-218ENST00000552839 DNAH8Q96JB1 4490 aa7.34□□□□□ -1.23
TMEM116-218ENST00000552839 IGLV5-39A0A0G2JS06 123 aa7.34□□□□□ -1.23
TMEM116-218ENST00000552839 LOC107984640A0A0U1RRK4 108 aa7.34□□□□□ -1.23
TMEM116-218ENST00000552839 LINC01620Q4KN68 170 aa7.34□□□□□ -1.23
TMEM116-218ENST00000552839 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
TMEM116-218ENST00000552839 UNQ6190/PRO20217Q6UXQ8 127 aa7.34□□□□□ -1.23
TMEM116-218ENST00000552839 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
TMEM116-218ENST00000552839 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
TMEM116-218ENST00000552839 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
TMEM116-218ENST00000552839 J3QQQ9 107 aa7.33□□□□□ -1.24
TMEM116-218ENST00000552839 OXTP01178 125 aa7.33□□□□□ -1.24
TMEM116-218ENST00000552839 NMUP48645 174 aa7.33□□□□□ -1.24
TMEM116-218ENST00000552839 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
TMEM116-218ENST00000552839 KIAA0087Q14695 138 aa7.33□□□□□ -1.24
TMEM116-218ENST00000552839 NDUFA12Q9UI09 145 aa7.33□□□□□ -1.24
TMEM116-218ENST00000552839 IGKV2-24A0A0C4DH68 120 aa7.32□□□□□ -1.24
TMEM116-218ENST00000552839 E9PLD3 99 aa7.32□□□□□ -1.24
TMEM116-218ENST00000552839 GAGE2BQ13066 116 aa7.32□□□□□ -1.24
TMEM116-218ENST00000552839 RNF151Q2KHN1 245 aa7.32□□□□□ -1.24
TMEM116-218ENST00000552839 STPG4Q8N801 248 aa7.32□□□□□ -1.24
TMEM116-218ENST00000552839 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
TMEM116-218ENST00000552839 C6orf48Q9UBA6 75 aa7.32□□□□□ -1.24
TMEM116-218ENST00000552839 SLPIP03973 132 aa7.31□□□□□ -1.24
TMEM116-218ENST00000552839 HERV-K104P63124 156 aa7.31□□□□□ -1.24
TMEM116-218ENST00000552839 C10orf25Q5T742 122 aa7.31□□□□□ -1.24
TMEM116-218ENST00000552839 SCXQ7RTU7 201 aa7.31□□□□□ -1.24
TMEM116-218ENST00000552839 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
TMEM116-218ENST00000552839 PFN2P35080 140 aa7.3□□□□□ -1.24
TMEM116-218ENST00000552839 GAGE2EQ4V326 116 aa7.3□□□□□ -1.24
TMEM116-218ENST00000552839 LINC00474Q9P2X8 69 aa7.3□□□□□ -1.24
TMEM116-218ENST00000552839 GAGE2DQ9UEU5 116 aa7.3□□□□□ -1.24
TMEM116-218ENST00000552839 ZNF815PA8K554 130 aa7.29□□□□□ -1.24
TMEM116-218ENST00000552839 LINC00158P58513 81 aa7.29□□□□□ -1.24
TMEM116-218ENST00000552839 MAJINQ3KP22 176 aa7.29□□□□□ -1.24
TMEM116-218ENST00000552839 C9orf116Q5BN46 136 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-218ENST00000552839 SCGB1D4Q6XE38 83 aa7.29□□□□□ -1.24
TMEM116-218ENST00000552839 VAMP8Q9BV40 100 aa7.29□□□□□ -1.24
TMEM116-218ENST00000552839 ERG28Q9UKR5 140 aa7.29□□□□□ -1.24
TMEM116-218ENST00000552839 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
TMEM116-218ENST00000552839 TSPEAR-AS2P59090 65 aa7.28□□□□□ -1.24
TMEM116-218ENST00000552839 CIRBPQ14011 172 aaKnown RBP7.28□□□□□ -1.24
TMEM116-218ENST00000552839 A0A096LNI7 61 aa7.27□□□□□ -1.25
TMEM116-218ENST00000552839 A0A0U1RRA0 63 aa7.27□□□□□ -1.25
TMEM116-218ENST00000552839 PTTG1IPP53801 180 aa7.27□□□□□ -1.25
TMEM116-218ENST00000552839 JOSD1Q15040 202 aaPredicted RBP7.27□□□□□ -1.25
TMEM116-218ENST00000552839 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.25
TMEM116-218ENST00000552839 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
TMEM116-218ENST00000552839 S100A12P80511 92 aa7.26□□□□□ -1.25
TMEM116-218ENST00000552839 COX17Q14061 63 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms