RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 SEC11AP67812 179 aa10.4□□□□□ -0.74
BRF1-219ENST00000551787 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
BRF1-219ENST00000551787 LINC00469Q8N7U9 141 aa10.4□□□□□ -0.74
BRF1-219ENST00000551787 C18orf32Q8TCD1 76 aa10.4□□□□□ -0.74
BRF1-219ENST00000551787 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
BRF1-219ENST00000551787 CKS1BP61024 79 aa10.39□□□□□ -0.75
BRF1-219ENST00000551787 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
BRF1-219ENST00000551787 PHF5AQ7RTV0 110 aaKnown RBP10.39□□□□□ -0.75
BRF1-219ENST00000551787 PACRGQ96M98 296 aaPredicted RBP10.39□□□□□ -0.75
BRF1-219ENST00000551787 LINC00614P0C842 121 aa10.38□□□□□ -0.75
BRF1-219ENST00000551787 TLX1NBP0CAT3 122 aa10.38□□□□□ -0.75
BRF1-219ENST00000551787 A0A096LNJ9 63 aa10.37□□□□□ -0.75
BRF1-219ENST00000551787 TRBV30A0A0K0K1B3 111 aa10.37□□□□□ -0.75
BRF1-219ENST00000551787 COLCA2A8K830 154 aa10.37□□□□□ -0.75
BRF1-219ENST00000551787 NDUFA6P56556 154 aa10.37□□□□□ -0.75
BRF1-219ENST00000551787 PMVKQ15126 192 aa10.37□□□□□ -0.75
BRF1-219ENST00000551787 TINCRA0A1B0GVN0 87 aa10.36□□□□□ -0.75
BRF1-219ENST00000551787 LINC01549A6NIU2 74 aa10.36□□□□□ -0.75
BRF1-219ENST00000551787 Q8IZM0 81 aa10.36□□□□□ -0.75
BRF1-219ENST00000551787 NDUFC2-KCTD14E9PQ53 114 aa10.35□□□□□ -0.75
BRF1-219ENST00000551787 FAM19A5Q7Z5A7 132 aaPredicted RBP10.35□□□□□ -0.75
BRF1-219ENST00000551787 SMIM1B2RUZ4 78 aa10.34□□□□□ -0.75
BRF1-219ENST00000551787 SPINK8P0C7L1 97 aa10.34□□□□□ -0.75
BRF1-219ENST00000551787 KRTAP7-1Q8IUC3 87 aa10.34□□□□□ -0.75
BRF1-219ENST00000551787 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
BRF1-219ENST00000551787 HBDP02042 147 aa10.33□□□□□ -0.76
BRF1-219ENST00000551787 C9orf129Q5T035 196 aaKnown RBP10.33□□□□□ -0.76
BRF1-219ENST00000551787 IGLV5-45A0A087WSX0 123 aa10.32□□□□□ -0.76
BRF1-219ENST00000551787 F8VRH5 84 aa10.31□□□□□ -0.76
BRF1-219ENST00000551787 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
BRF1-219ENST00000551787 RAB5BP61020 215 aa10.31□□□□□ -0.76
BRF1-219ENST00000551787 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.76
BRF1-219ENST00000551787 PDZD11Q5EBL8 140 aa10.31□□□□□ -0.76
BRF1-219ENST00000551787 KRTAP11-1Q8IUC1 163 aa10.31□□□□□ -0.76
BRF1-219ENST00000551787 COX7B2Q8TF08 81 aa10.31□□□□□ -0.76
BRF1-219ENST00000551787 XAGE1AQ9HD64 81 aa10.31□□□□□ -0.76
BRF1-219ENST00000551787 TRGC2P03986 189 aa10.3□□□□□ -0.76
BRF1-219ENST00000551787 C1orf137Q5JT78 98 aa10.3□□□□□ -0.76
BRF1-219ENST00000551787 SPINK6Q6UWN8 80 aa10.29□□□□□ -0.76
BRF1-219ENST00000551787 BAGE3Q86Y29 109 aa10.29□□□□□ -0.76
BRF1-219ENST00000551787 H3BRM9 83 aa10.28□□□□□ -0.76
BRF1-219ENST00000551787 M0QXV9 152 aa10.28□□□□□ -0.76
BRF1-219ENST00000551787 IGLC3P0DOY3 106 aa10.28□□□□□ -0.76
BRF1-219ENST00000551787 ATP5LO75964 103 aa10.27□□□□□ -0.77
BRF1-219ENST00000551787 SERTAD4-AS1Q5TG53 156 aa10.27□□□□□ -0.77
BRF1-219ENST00000551787 CXCL5P42830 114 aa10.26□□□□□ -0.77
BRF1-219ENST00000551787 TNXBP22105 4242 aa10.25□□□□□ -0.77
BRF1-219ENST00000551787 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
BRF1-219ENST00000551787 UBE2BP63146 152 aa10.25□□□□□ -0.77
BRF1-219ENST00000551787 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
BRF1-219ENST00000551787 C11orf86A6NJI1 115 aa10.24□□□□□ -0.77
BRF1-219ENST00000551787 FAM19A2Q8N3H0 131 aa10.24□□□□□ -0.77
BRF1-219ENST00000551787 LINC01600Q96MT4 127 aa10.24□□□□□ -0.77
BRF1-219ENST00000551787 REG3GQ6UW15 175 aa10.23□□□□□ -0.77
BRF1-219ENST00000551787 C22orf24Q9Y442 160 aa10.23□□□□□ -0.77
BRF1-219ENST00000551787 IGLV5-39A0A0G2JS06 123 aa10.22□□□□□ -0.77
BRF1-219ENST00000551787 IGLV7-43P04211 117 aa10.22□□□□□ -0.77
BRF1-219ENST00000551787 ODF1Q14990 250 aa10.22□□□□□ -0.77
BRF1-219ENST00000551787 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
BRF1-219ENST00000551787 CHTOPQ9Y3Y2 248 aaKnown RBP10.22□□□□□ -0.77
BRF1-219ENST00000551787 HSBP1O75506 76 aa10.21□□□□□ -0.77
BRF1-219ENST00000551787 IFI27L1Q96BM0 104 aa10.21□□□□□ -0.77
BRF1-219ENST00000551787 PFN2P35080 140 aa10.2□□□□□ -0.78
BRF1-219ENST00000551787 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
BRF1-219ENST00000551787 HMCN2Q8NDA2 5059 aa10.19□□□□□ -0.78
BRF1-219ENST00000551787 SERF1AO75920 110 aa10.17□□□□□ -0.78
BRF1-219ENST00000551787 KRTAP10-8P60410 259 aa10.17□□□□□ -0.78
BRF1-219ENST00000551787 LBHQ53QV2 105 aaPredicted RBP10.17□□□□□ -0.78
BRF1-219ENST00000551787 H0Y8G0 127 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BKO60814 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BJP06899 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BOP23527 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BBP33778 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BDP58876 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 LINC00310P59036 64 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BCP62807 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST2H2BEQ16778 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BHQ93079 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 DIRC1Q969H9 104 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BNQ99877 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 HIST1H2BMQ99879 126 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 PLA2G2DQ9UNK4 145 aa10.16□□□□□ -0.78
BRF1-219ENST00000551787 TRAV12-1A0A0B4J245 112 aa10.15□□□□□ -0.78
BRF1-219ENST00000551787 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
BRF1-219ENST00000551787 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
BRF1-219ENST00000551787 NUPR1O60356 82 aa10.15□□□□□ -0.78
BRF1-219ENST00000551787 MRPL55Q7Z7F7 128 aaKnown RBP10.15□□□□□ -0.78
BRF1-219ENST00000551787 LINC00167Q96N53 147 aa10.14□□□□□ -0.79
BRF1-219ENST00000551787 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
BRF1-219ENST00000551787 TMEM223A0PJW6 202 aa10.13□□□□□ -0.79
BRF1-219ENST00000551787 H0Y9J4 135 aa10.12□□□□□ -0.79
BRF1-219ENST00000551787 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
BRF1-219ENST00000551787 SND1-IT1Q9HBX3 110 aa10.12□□□□□ -0.79
BRF1-219ENST00000551787 TP73-AS1Q9UF72 201 aa10.12□□□□□ -0.79
BRF1-219ENST00000551787 FABP4P15090 132 aa10.11□□□□□ -0.79
BRF1-219ENST00000551787 A0A0U1RRA0 63 aa10.1□□□□□ -0.79
BRF1-219ENST00000551787 PRR26Q8N8Z3 221 aa10.1□□□□□ -0.79
BRF1-219ENST00000551787 NKAPP1Q8N9T2 125 aa10.1□□□□□ -0.79
BRF1-219ENST00000551787 IGLV5-37A0A075B6J1 123 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms