RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 UBE2L5PA0A1B0GUS4 154 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 SPINK4O60575 86 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 SNAPC5O75971 98 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 MT4P47944 62 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 UBE2L3P68036 154 aaKnown RBP-0.81□□□□□ -2.54
GPN3-209ENST00000551079 S100A12P80511 92 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 UQCR10Q9UDW1 63 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 REV3LO60673 3130 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 MYOM2P54296 1465 aa-0.81□□□□□ -2.54
GPN3-209ENST00000551079 KTN1Q86UP2 1357 aaKnown RBP-0.82□□□□□ -2.54
GPN3-209ENST00000551079 UBE2D3P61077 147 aa-0.82□□□□□ -2.54
GPN3-209ENST00000551079 UBE2D2P62837 147 aa-0.82□□□□□ -2.54
GPN3-209ENST00000551079 FAM167A-AS1Q96KT0 104 aa-0.82□□□□□ -2.54
GPN3-209ENST00000551079 SPG11Q96JI7 2443 aa-0.82□□□□□ -2.54
GPN3-209ENST00000551079 PLEKHH2Q8IVE3 1493 aa-0.82□□□□□ -2.54
GPN3-209ENST00000551079 FAT1Q14517 4588 aa-0.82□□□□□ -2.54
GPN3-209ENST00000551079 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.82□□□□□ -2.54
GPN3-209ENST00000551079 NAIPQ13075 1403 aa-0.82□□□□□ -2.54
GPN3-209ENST00000551079 A0A0G2JMZ2 1700 aa-0.83□□□□□ -2.54
GPN3-209ENST00000551079 ABCA3Q99758 1704 aa-0.83□□□□□ -2.54
GPN3-209ENST00000551079 A0A087WVE0 104 aa-0.83□□□□□ -2.54
GPN3-209ENST00000551079 SYS1-DBNDD2H3BUS1 97 aa-0.83□□□□□ -2.54
GPN3-209ENST00000551079 EPG5Q9HCE0 2579 aa-0.83□□□□□ -2.54
GPN3-209ENST00000551079 DIP2CQ9Y2E4 1556 aa-0.83□□□□□ -2.54
GPN3-209ENST00000551079 SPHKAPQ2M3C7 1700 aa-0.84□□□□□ -2.54
GPN3-209ENST00000551079 KNDC1Q76NI1 1749 aa-0.84□□□□□ -2.54
GPN3-209ENST00000551079 SPTBN4Q9H254 2564 aa-0.84□□□□□ -2.54
GPN3-209ENST00000551079 CPSF4LA6NMK7 179 aaKnown RBP-0.84□□□□□ -2.54
GPN3-209ENST00000551079 HMGN1P05114 100 aa-0.84□□□□□ -2.54
GPN3-209ENST00000551079 HSD52Q0P140 79 aa-0.84□□□□□ -2.54
GPN3-209ENST00000551079 HERC2O95714 4834 aa-0.84□□□□□ -2.54
GPN3-209ENST00000551079 SETBP1Q9Y6X0 1596 aa-0.84□□□□□ -2.54
GPN3-209ENST00000551079 SPRR2AP35326 72 aa-0.85□□□□□ -2.55
GPN3-209ENST00000551079 H1FX-AS1Q4G0G2 97 aa-0.85□□□□□ -2.55
GPN3-209ENST00000551079 LELP1Q5T871 98 aa-0.85□□□□□ -2.55
GPN3-209ENST00000551079 TOPAZ1Q8N9V7 1692 aa-0.85□□□□□ -2.55
GPN3-209ENST00000551079 SLIT1O75093 1534 aa-0.85□□□□□ -2.55
GPN3-209ENST00000551079 RYR3Q15413 4870 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 A0A1B0GWA3 101 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 DLEU1O43261 78 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 TRAPPC2P0DI81 140 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 TRAPPC2BP0DI82 140 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 SEC11AP67812 179 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 WHAMMP3Q1A5X7 153 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 DEFB135Q30KP9 77 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 PRO1854Q9UHT4 67 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 PKD1P98161 4303 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 SONP18583 2426 aaKnown RBP-0.86□□□□□ -2.55
GPN3-209ENST00000551079 STARD9Q9P2P6 4700 aa-0.86□□□□□ -2.55
GPN3-209ENST00000551079 NRKQ7Z2Y5 1582 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 NBPF19A0A087WUL8 3843 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 FAM24AA6NFZ4 105 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 SNCAP37840 140 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 ASIPP42127 132 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 RPL13AP3Q6NVV1 102 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 C1orf54Q8WWF1 131 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 PRO1933Q9H354 126 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 NKTRP30414 1462 aaKnown RBP-0.87□□□□□ -2.55
GPN3-209ENST00000551079 MRC2Q9UBG0 1479 aa-0.87□□□□□ -2.55
GPN3-209ENST00000551079 ARHGAP5Q13017 1502 aa-0.88□□□□□ -2.55
GPN3-209ENST00000551079 A0A1B0GU69 56 aa-0.88□□□□□ -2.55
GPN3-209ENST00000551079 F6UZH7 168 aa-0.88□□□□□ -2.55
GPN3-209ENST00000551079 COX8AP10176 69 aa-0.88□□□□□ -2.55
GPN3-209ENST00000551079 SPRR2EP22531 72 aa-0.88□□□□□ -2.55
GPN3-209ENST00000551079 ATP5EP56381 51 aaPredicted RBP-0.88□□□□□ -2.55
GPN3-209ENST00000551079 PZPP20742 1482 aa-0.88□□□□□ -2.55
GPN3-209ENST00000551079 PDE4DIPQ5VU43 2346 aa-0.88□□□□□ -2.55
GPN3-209ENST00000551079 TARBP1Q13395 1621 aaKnown RBP-0.89□□□□□ -2.55
GPN3-209ENST00000551079 DNAH6Q9C0G6 4158 aa-0.89□□□□□ -2.55
GPN3-209ENST00000551079 hADV29S1A0JD25 119 aa-0.89□□□□□ -2.55
GPN3-209ENST00000551079 CRYM-AS1A6NIL9 109 aa-0.89□□□□□ -2.55
GPN3-209ENST00000551079 S100A1P23297 94 aa-0.89□□□□□ -2.55
GPN3-209ENST00000551079 USMG5Q96IX5 58 aa-0.89□□□□□ -2.55
GPN3-209ENST00000551079 COL14A1Q05707 1796 aaKnown RBP-0.9□□□□□ -2.55
GPN3-209ENST00000551079 COX6CP09669 75 aa-0.9□□□□□ -2.55
GPN3-209ENST00000551079 DEFB107AQ8IZN7 70 aa-0.9□□□□□ -2.55
GPN3-209ENST00000551079 C12orf57Q99622 126 aa-0.9□□□□□ -2.55
GPN3-209ENST00000551079 IER3IP1Q9Y5U9 82 aa-0.9□□□□□ -2.55
GPN3-209ENST00000551079 PRRC2CQ9Y520 2896 aaKnown RBP-0.9□□□□□ -2.55
GPN3-209ENST00000551079 MON2Q7Z3U7 1717 aa-0.9□□□□□ -2.55
GPN3-209ENST00000551079 USH2AO75445 5202 aa-0.9□□□□□ -2.55
GPN3-209ENST00000551079 LYSTQ99698 3801 aa-0.9□□□□□ -2.55
GPN3-209ENST00000551079 TNRC18O15417 2968 aaPredicted RBP-0.91□□□□□ -2.55
GPN3-209ENST00000551079 KIAA1551Q9HCM1 1747 aa-0.91□□□□□ -2.55
GPN3-209ENST00000551079 NAP1L6A6NFF2 107 aa-0.91□□□□□ -2.56
GPN3-209ENST00000551079 CORTO00230 105 aa-0.91□□□□□ -2.56
GPN3-209ENST00000551079 PPP3R1P63098 170 aa-0.91□□□□□ -2.56
GPN3-209ENST00000551079 C6orf201Q7Z4U5 140 aa-0.91□□□□□ -2.56
GPN3-209ENST00000551079 SVBPQ8N300 66 aa-0.91□□□□□ -2.56
GPN3-209ENST00000551079 AKAP13Q12802 2813 aa-0.91□□□□□ -2.56
GPN3-209ENST00000551079 ABCC5O15440 1437 aa-0.91□□□□□ -2.56
GPN3-209ENST00000551079 HYDINQ4G0P3 5121 aa-0.92□□□□□ -2.56
GPN3-209ENST00000551079 C7orf77A4D0Y5 90 aa-0.92□□□□□ -2.56
GPN3-209ENST00000551079 LINC00587B1AMM8 73 aa-0.92□□□□□ -2.56
GPN3-209ENST00000551079 SAA2P0DJI9 122 aaPredicted RBP-0.92□□□□□ -2.56
GPN3-209ENST00000551079 GNG4P50150 75 aa-0.92□□□□□ -2.56
GPN3-209ENST00000551079 DEFB112Q30KQ8 113 aa-0.92□□□□□ -2.56
GPN3-209ENST00000551079 LINC00846Q9NV44 126 aa-0.92□□□□□ -2.56
GPN3-209ENST00000551079 SHPRHQ149N8 1683 aa-0.92□□□□□ -2.56
GPN3-209ENST00000551079 RGPD2P0DJD1 1756 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms