RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 SVBPQ8N300 66 aa6.04□□□□□ -1.44
HDAC7-229ENST00000549883 GEMIN7Q9H840 131 aaKnown RBP6.04□□□□□ -1.44
HDAC7-229ENST00000549883 SMCO4Q9NRQ5 59 aa6.04□□□□□ -1.44
HDAC7-229ENST00000549883 SMIM1B2RUZ4 78 aa6.03□□□□□ -1.44
HDAC7-229ENST00000549883 G0S2P27469 103 aa6.03□□□□□ -1.44
HDAC7-229ENST00000549883 HERVK_113P63121 156 aa6.03□□□□□ -1.44
HDAC7-229ENST00000549883 FAM19A5Q7Z5A7 132 aaPredicted RBP6.03□□□□□ -1.44
HDAC7-229ENST00000549883 CBLN2Q8IUK8 224 aa6.03□□□□□ -1.44
HDAC7-229ENST00000549883 LINC00469Q8N7U9 141 aa6.03□□□□□ -1.44
HDAC7-229ENST00000549883 PSORS1C2Q9UIG4 136 aa6.03□□□□□ -1.44
HDAC7-229ENST00000549883 IGLV5-45A0A087WSX0 123 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 TRBV30A0A0K0K1B3 111 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 TINCRA0A1B0GVN0 87 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 SPINK8P0C7L1 97 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 LINC00614P0C842 121 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 SRSF9Q13242 221 aaKnown RBP eCLIP6.02□□□□□ -1.45
HDAC7-229ENST00000549883 NDUFA5Q16718 116 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 C6orf226Q5I0X4 101 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 PAPPA-AS1Q5QFB9 102 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 Q8IZM0 81 aa6.02□□□□□ -1.45
HDAC7-229ENST00000549883 NDUFC2-KCTD14E9PQ53 114 aa6.01□□□□□ -1.45
HDAC7-229ENST00000549883 PRSS2P07478 247 aa6.01□□□□□ -1.45
HDAC7-229ENST00000549883 CKS1BP61024 79 aa6.01□□□□□ -1.45
HDAC7-229ENST00000549883 PMVKQ15126 192 aa6.01□□□□□ -1.45
HDAC7-229ENST00000549883 PDZD11Q5EBL8 140 aa6.01□□□□□ -1.45
HDAC7-229ENST00000549883 PACRGQ96M98 296 aaPredicted RBP6.01□□□□□ -1.45
HDAC7-229ENST00000549883 XAGE1AQ9HD64 81 aa6.01□□□□□ -1.45
HDAC7-229ENST00000549883 NDUFA6P56556 154 aa6□□□□□ -1.45
HDAC7-229ENST00000549883 SEC11AP67812 179 aa6□□□□□ -1.45
HDAC7-229ENST00000549883 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
HDAC7-229ENST00000549883 HBDP02042 147 aa5.99□□□□□ -1.45
HDAC7-229ENST00000549883 COX7B2Q8TF08 81 aa5.99□□□□□ -1.45
HDAC7-229ENST00000549883 F8VRH5 84 aa5.98□□□□□ -1.45
HDAC7-229ENST00000549883 M0QXV9 152 aa5.98□□□□□ -1.45
HDAC7-229ENST00000549883 IGLC3P0DOY3 106 aa5.98□□□□□ -1.45
HDAC7-229ENST00000549883 ZNF22P17026 224 aaPredicted RBP5.98□□□□□ -1.45
HDAC7-229ENST00000549883 C1orf137Q5JT78 98 aa5.98□□□□□ -1.45
HDAC7-229ENST00000549883 SPINK6Q6UWN8 80 aa5.98□□□□□ -1.45
HDAC7-229ENST00000549883 LINC01600Q96MT4 127 aa5.98□□□□□ -1.45
HDAC7-229ENST00000549883 LINC01549A6NIU2 74 aa5.97□□□□□ -1.45
HDAC7-229ENST00000549883 C11orf86A6NJI1 115 aa5.97□□□□□ -1.45
HDAC7-229ENST00000549883 RAB5BP61020 215 aa5.97□□□□□ -1.45
HDAC7-229ENST00000549883 BAGE3Q86Y29 109 aa5.97□□□□□ -1.45
HDAC7-229ENST00000549883 TRGC2P03986 189 aa5.96□□□□□ -1.46
HDAC7-229ENST00000549883 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
HDAC7-229ENST00000549883 LINC00310P59036 64 aa5.96□□□□□ -1.46
HDAC7-229ENST00000549883 FAM19A2Q8N3H0 131 aa5.96□□□□□ -1.46
HDAC7-229ENST00000549883 IGLV5-39A0A0G2JS06 123 aa5.95□□□□□ -1.46
HDAC7-229ENST00000549883 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
HDAC7-229ENST00000549883 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
HDAC7-229ENST00000549883 H3BRM9 83 aa5.94□□□□□ -1.46
HDAC7-229ENST00000549883 NUPR1O60356 82 aa5.94□□□□□ -1.46
HDAC7-229ENST00000549883 ATP5LO75964 103 aa5.94□□□□□ -1.46
HDAC7-229ENST00000549883 CXCL5P42830 114 aa5.94□□□□□ -1.46
HDAC7-229ENST00000549883 UBE2BP63146 152 aa5.94□□□□□ -1.46
HDAC7-229ENST00000549883 CHCHD1Q96BP2 118 aaKnown RBP5.94□□□□□ -1.46
HDAC7-229ENST00000549883 COLCA2A8K830 154 aa5.93□□□□□ -1.46
HDAC7-229ENST00000549883 SCO1O75880 301 aa5.93□□□□□ -1.46
HDAC7-229ENST00000549883 IFI27L1Q96BM0 104 aa5.93□□□□□ -1.46
HDAC7-229ENST00000549883 ZNF625Q96I27 306 aaPredicted RBP5.93□□□□□ -1.46
HDAC7-229ENST00000549883 CHTOPQ9Y3Y2 248 aaKnown RBP5.93□□□□□ -1.46
HDAC7-229ENST00000549883 TNXBP22105 4242 aa5.93□□□□□ -1.46
HDAC7-229ENST00000549883 SERF1AO75920 110 aa5.92□□□□□ -1.46
HDAC7-229ENST00000549883 PFN2P35080 140 aa5.92□□□□□ -1.46
HDAC7-229ENST00000549883 TMEM170BQ5T4T1 132 aa5.92□□□□□ -1.46
HDAC7-229ENST00000549883 REG3GQ6UW15 175 aa5.92□□□□□ -1.46
HDAC7-229ENST00000549883 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
HDAC7-229ENST00000549883 GAGE10A6NGK3 116 aa5.91□□□□□ -1.46
HDAC7-229ENST00000549883 RPL37AP8A6NKH3 93 aa5.91□□□□□ -1.46
HDAC7-229ENST00000549883 HSBP1O75506 76 aa5.91□□□□□ -1.46
HDAC7-229ENST00000549883 Q8NDZ9 215 aa5.91□□□□□ -1.46
HDAC7-229ENST00000549883 TMEM223A0PJW6 202 aa5.9□□□□□ -1.46
HDAC7-229ENST00000549883 H0Y9J4 135 aa5.9□□□□□ -1.46
HDAC7-229ENST00000549883 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
HDAC7-229ENST00000549883 MRPL55Q7Z7F7 128 aaKnown RBP5.9□□□□□ -1.46
HDAC7-229ENST00000549883 PRR26Q8N8Z3 221 aa5.9□□□□□ -1.46
HDAC7-229ENST00000549883 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
HDAC7-229ENST00000549883 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
HDAC7-229ENST00000549883 H0Y8G0 127 aa5.89□□□□□ -1.47
HDAC7-229ENST00000549883 DIRC1Q969H9 104 aa5.89□□□□□ -1.47
HDAC7-229ENST00000549883 SND1-IT1Q9HBX3 110 aa5.89□□□□□ -1.47
HDAC7-229ENST00000549883 ERG28Q9UKR5 140 aa5.89□□□□□ -1.47
HDAC7-229ENST00000549883 A0A0U1RRA0 63 aa5.88□□□□□ -1.47
HDAC7-229ENST00000549883 LBHQ53QV2 105 aaPredicted RBP5.88□□□□□ -1.47
HDAC7-229ENST00000549883 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
HDAC7-229ENST00000549883 HMCN2Q8NDA2 5059 aa5.87□□□□□ -1.47
HDAC7-229ENST00000549883 IGLV5-37A0A075B6J1 123 aa5.87□□□□□ -1.47
HDAC7-229ENST00000549883 VPREB1P12018 145 aa5.87□□□□□ -1.47
HDAC7-229ENST00000549883 FABP4P15090 132 aa5.87□□□□□ -1.47
HDAC7-229ENST00000549883 PMCHL2Q9BQD1 86 aa5.87□□□□□ -1.47
HDAC7-229ENST00000549883 ZNF861PO60384 105 aa5.86□□□□□ -1.47
HDAC7-229ENST00000549883 LEPROTL1O95214 131 aa5.86□□□□□ -1.47
HDAC7-229ENST00000549883 TSPEAR-AS2P59090 65 aa5.86□□□□□ -1.47
HDAC7-229ENST00000549883 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
HDAC7-229ENST00000549883 BCE1O60756 84 aa5.85□□□□□ -1.47
HDAC7-229ENST00000549883 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
HDAC7-229ENST00000549883 NKAPP1Q8N9T2 125 aa5.85□□□□□ -1.47
HDAC7-229ENST00000549883 TMEM238C9JI98 176 aa5.84□□□□□ -1.47
HDAC7-229ENST00000549883 SMIM13P0DJ93 91 aa5.84□□□□□ -1.47
HDAC7-229ENST00000549883 LINC00158P58513 81 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms