RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 COL5A1-AS1Q5SY13 56 aa8.3□□□□□ -1.08
RAB5B-204ENST00000548068 TM2D2Q9BX73 214 aa8.3□□□□□ -1.08
RAB5B-204ENST00000548068 SPANXDQ9BXN6 97 aa8.3□□□□□ -1.08
RAB5B-204ENST00000548068 Q9HAA7 133 aa8.3□□□□□ -1.08
RAB5B-204ENST00000548068 SPANXCQ9NY87 97 aa8.3□□□□□ -1.08
RAB5B-204ENST00000548068 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
RAB5B-204ENST00000548068 SPAG11BQ08648 103 aa8.29□□□□□ -1.08
RAB5B-204ENST00000548068 KRTAP26-1Q6PEX3 210 aa8.29□□□□□ -1.08
RAB5B-204ENST00000548068 IFITM1P13164 125 aa8.28□□□□□ -1.08
RAB5B-204ENST00000548068 DYNC2H1Q8NCM8 4307 aaKnown RBP8.27□□□□□ -1.09
RAB5B-204ENST00000548068 F8WDY8 70 aa8.27□□□□□ -1.09
RAB5B-204ENST00000548068 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
RAB5B-204ENST00000548068 KIAA0087Q14695 138 aa8.27□□□□□ -1.09
RAB5B-204ENST00000548068 LITAFQ99732 161 aa8.27□□□□□ -1.09
RAB5B-204ENST00000548068 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
RAB5B-204ENST00000548068 FXYD2P54710 66 aa8.25□□□□□ -1.09
RAB5B-204ENST00000548068 PPDPFQ9H3Y8 114 aa8.25□□□□□ -1.09
RAB5B-204ENST00000548068 SMIM13P0DJ93 91 aa8.24□□□□□ -1.09
RAB5B-204ENST00000548068 COX17Q14061 63 aa8.24□□□□□ -1.09
RAB5B-204ENST00000548068 C2orf48Q96LS8 159 aa8.24□□□□□ -1.09
RAB5B-204ENST00000548068 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
RAB5B-204ENST00000548068 DNAH7Q8WXX0 4024 aa8.24□□□□□ -1.09
RAB5B-204ENST00000548068 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-204ENST00000548068 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-204ENST00000548068 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
RAB5B-204ENST00000548068 LINC00158P58513 81 aa8.23□□□□□ -1.09
RAB5B-204ENST00000548068 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
RAB5B-204ENST00000548068 C2orf82Q6UX34 121 aa8.23□□□□□ -1.09
RAB5B-204ENST00000548068 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
RAB5B-204ENST00000548068 C15orf56Q8N910 161 aa8.23□□□□□ -1.09
RAB5B-204ENST00000548068 NTN5Q8WTR8 489 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-204ENST00000548068 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
RAB5B-204ENST00000548068 C3orf84H3BNL1 204 aa8.22□□□□□ -1.09
RAB5B-204ENST00000548068 TRBV30A0A0K0K1B3 111 aa8.21□□□□□ -1.1
RAB5B-204ENST00000548068 A0A1B0GWB2 263 aa8.21□□□□□ -1.1
RAB5B-204ENST00000548068 PSCAO43653 123 aa8.21□□□□□ -1.1
RAB5B-204ENST00000548068 HIGD2BQ4VC39 106 aa8.21□□□□□ -1.1
RAB5B-204ENST00000548068 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
RAB5B-204ENST00000548068 CAMK2N2Q96S95 79 aa8.21□□□□□ -1.1
RAB5B-204ENST00000548068 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.1
RAB5B-204ENST00000548068 A0A0U1RRA0 63 aa8.2□□□□□ -1.1
RAB5B-204ENST00000548068 PFN2P35080 140 aa8.2□□□□□ -1.1
RAB5B-204ENST00000548068 MIR7-3HGQ8N6C7 128 aa8.2□□□□□ -1.1
RAB5B-204ENST00000548068 A4D1N5 150 aa8.19□□□□□ -1.1
RAB5B-204ENST00000548068 USP17L23D6RBM5 183 aa8.19□□□□□ -1.1
RAB5B-204ENST00000548068 CASC10Q5T4H9 136 aa8.19□□□□□ -1.1
RAB5B-204ENST00000548068 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
RAB5B-204ENST00000548068 C6orf223Q8N319 242 aa8.19□□□□□ -1.1
RAB5B-204ENST00000548068 DAND5Q8N907 189 aa8.19□□□□□ -1.1
RAB5B-204ENST00000548068 CSMD3Q7Z407 3707 aa8.18□□□□□ -1.1
RAB5B-204ENST00000548068 A0A0B4J2C4 111 aa8.18□□□□□ -1.1
RAB5B-204ENST00000548068 NPC2P61916 151 aa8.18□□□□□ -1.1
RAB5B-204ENST00000548068 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
RAB5B-204ENST00000548068 RAB37Q96AX2 223 aa8.18□□□□□ -1.1
RAB5B-204ENST00000548068 TENM2Q9NT68 2774 aa8.18□□□□□ -1.1
RAB5B-204ENST00000548068 TAX1BP3O14907 124 aa8.17□□□□□ -1.1
RAB5B-204ENST00000548068 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
RAB5B-204ENST00000548068 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
RAB5B-204ENST00000548068 K7ERJ3 54 aa8.16□□□□□ -1.1
RAB5B-204ENST00000548068 TGP01266 2768 aa8.16□□□□□ -1.1
RAB5B-204ENST00000548068 RNF151Q2KHN1 245 aa8.16□□□□□ -1.1
RAB5B-204ENST00000548068 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
RAB5B-204ENST00000548068 C6orf48Q9UBA6 75 aa8.16□□□□□ -1.1
RAB5B-204ENST00000548068 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 C9orf118A6NHY6 69 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 CFC1BP0CG36 223 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 CFC1P0CG37 223 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 Q6ZRU5 148 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
RAB5B-204ENST00000548068 C9orf116Q5BN46 136 aaPredicted RBP8.14□□□□□ -1.11
RAB5B-204ENST00000548068 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
RAB5B-204ENST00000548068 LINC00476Q8WZB0 136 aa8.14□□□□□ -1.11
RAB5B-204ENST00000548068 SND1-IT1Q9HBX3 110 aa8.14□□□□□ -1.11
RAB5B-204ENST00000548068 STARD9Q9P2P6 4700 aa8.13□□□□□ -1.11
RAB5B-204ENST00000548068 LY6G6CO95867 125 aa8.13□□□□□ -1.11
RAB5B-204ENST00000548068 A0A1B0GV90 55 aa8.12□□□□□ -1.11
RAB5B-204ENST00000548068 NDUFC2-KCTD14E9PQ53 114 aa8.12□□□□□ -1.11
RAB5B-204ENST00000548068 Q6ZR54 194 aa8.12□□□□□ -1.11
RAB5B-204ENST00000548068 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
RAB5B-204ENST00000548068 PLECQ15149 4684 aaKnown RBP8.12□□□□□ -1.11
RAB5B-204ENST00000548068 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
RAB5B-204ENST00000548068 H3BUT2 72 aa8.11□□□□□ -1.11
RAB5B-204ENST00000548068 M0R2N4 97 aa8.11□□□□□ -1.11
RAB5B-204ENST00000548068 LECT2O14960 151 aa8.11□□□□□ -1.11
RAB5B-204ENST00000548068 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
RAB5B-204ENST00000548068 NDUFC2O95298 119 aa8.11□□□□□ -1.11
RAB5B-204ENST00000548068 LYRM7Q5U5X0 104 aa8.11□□□□□ -1.11
RAB5B-204ENST00000548068 PKIGQ9Y2B9 76 aa8.11□□□□□ -1.11
RAB5B-204ENST00000548068 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
RAB5B-204ENST00000548068 Q1RN00 199 aa8.1□□□□□ -1.11
RAB5B-204ENST00000548068 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
RAB5B-204ENST00000548068 A0A1W2PPM0 123 aa8.09□□□□□ -1.11
RAB5B-204ENST00000548068 TSPAN13O95857 204 aa8.09□□□□□ -1.11
RAB5B-204ENST00000548068 FABP2P12104 132 aa8.09□□□□□ -1.11
RAB5B-204ENST00000548068 RPL13AP40429 203 aaKnown RBP8.09□□□□□ -1.11
RAB5B-204ENST00000548068 CNBPP62633 177 aaKnown RBP8.09□□□□□ -1.11
RAB5B-204ENST00000548068 VPS13DQ5THJ4 4388 aa8.08□□□□□ -1.12
RAB5B-204ENST00000548068 VAMP3Q15836 100 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms