RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 SPANXDQ9BXN6 97 aa12.97□□□□□ -0.33
SKP2-208ENST00000546211 SPANXCQ9NY87 97 aa12.97□□□□□ -0.33
SKP2-208ENST00000546211 DNAH7Q8WXX0 4024 aa12.97□□□□□ -0.33
SKP2-208ENST00000546211 ADAMTSL4-AS1Q5T5F5 129 aa12.95□□□□□ -0.34
SKP2-208ENST00000546211 C2orf82Q6UX34 121 aa12.95□□□□□ -0.34
SKP2-208ENST00000546211 COX11Q9Y6N1 276 aa12.95□□□□□ -0.34
SKP2-208ENST00000546211 TMEM238LA0A1B0GVL6 79 aa12.94□□□□□ -0.34
SKP2-208ENST00000546211 A6NJY4 79 aa12.94□□□□□ -0.34
SKP2-208ENST00000546211 TTC32Q5I0X7 151 aa12.94□□□□□ -0.34
SKP2-208ENST00000546211 A0A0U1RRA0 63 aa12.94□□□□□ -0.34
SKP2-208ENST00000546211 SMIM13P0DJ93 91 aa12.94□□□□□ -0.34
SKP2-208ENST00000546211 CSMD3Q7Z407 3707 aa12.93□□□□□ -0.34
SKP2-208ENST00000546211 ZNF561-AS1K7EIQ3 104 aa12.93□□□□□ -0.34
SKP2-208ENST00000546211 MUSTN1Q8IVN3 82 aa12.93□□□□□ -0.34
SKP2-208ENST00000546211 KRTAP1-5Q9BYS1 174 aa12.93□□□□□ -0.34
SKP2-208ENST00000546211 RPL24P83731 157 aaKnown RBP12.92□□□□□ -0.34
SKP2-208ENST00000546211 C15orf56Q8N910 161 aa12.92□□□□□ -0.34
SKP2-208ENST00000546211 IFITM1P13164 125 aa12.91□□□□□ -0.34
SKP2-208ENST00000546211 HIGD2BQ4VC39 106 aa12.91□□□□□ -0.34
SKP2-208ENST00000546211 C6orf223Q8N319 242 aa12.91□□□□□ -0.34
SKP2-208ENST00000546211 DAND5Q8N907 189 aa12.91□□□□□ -0.34
SKP2-208ENST00000546211 NHP2Q9NX24 153 aaKnown RBP12.91□□□□□ -0.34
SKP2-208ENST00000546211 ERG28Q9UKR5 140 aa12.91□□□□□ -0.34
SKP2-208ENST00000546211 NBDYA0A0U1RRE5 68 aa12.9□□□□□ -0.34
SKP2-208ENST00000546211 LINC00158P58513 81 aa12.9□□□□□ -0.34
SKP2-208ENST00000546211 NTN5Q8WTR8 489 aaPredicted RBP12.9□□□□□ -0.34
SKP2-208ENST00000546211 COPS9Q8WXC6 57 aa12.9□□□□□ -0.34
SKP2-208ENST00000546211 LINC00526Q96FQ7 95 aa12.9□□□□□ -0.34
SKP2-208ENST00000546211 STARD9Q9P2P6 4700 aa12.9□□□□□ -0.34
SKP2-208ENST00000546211 PLECQ15149 4684 aaKnown RBP12.9□□□□□ -0.35
SKP2-208ENST00000546211 PFN2P35080 140 aa12.89□□□□□ -0.35
SKP2-208ENST00000546211 NPC2P61916 151 aa12.89□□□□□ -0.35
SKP2-208ENST00000546211 UNQ6190/PRO20217Q6UXQ8 127 aa12.88□□□□□ -0.35
SKP2-208ENST00000546211 GVQW2A0A096LPI5 108 aaPredicted RBP12.87□□□□□ -0.35
SKP2-208ENST00000546211 MIR7-3HGQ8N6C7 128 aa12.87□□□□□ -0.35
SKP2-208ENST00000546211 LINC00308Q8TCZ7 52 aa12.87□□□□□ -0.35
SKP2-208ENST00000546211 C2orf48Q96LS8 159 aa12.87□□□□□ -0.35
SKP2-208ENST00000546211 CAMK2N2Q96S95 79 aa12.87□□□□□ -0.35
SKP2-208ENST00000546211 A4D1N5 150 aa12.86□□□□□ -0.35
SKP2-208ENST00000546211 COX17Q14061 63 aa12.86□□□□□ -0.35
SKP2-208ENST00000546211 F8WDY8 70 aa12.86□□□□□ -0.35
SKP2-208ENST00000546211 CASC10Q5T4H9 136 aa12.86□□□□□ -0.35
SKP2-208ENST00000546211 C10orf25Q5T742 122 aa12.86□□□□□ -0.35
SKP2-208ENST00000546211 USP17L23D6RBM5 183 aa12.85□□□□□ -0.35
SKP2-208ENST00000546211 C3orf84H3BNL1 204 aa12.85□□□□□ -0.35
SKP2-208ENST00000546211 PSCAO43653 123 aa12.85□□□□□ -0.35
SKP2-208ENST00000546211 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
SKP2-208ENST00000546211 A0A1B0GWB2 263 aa12.84□□□□□ -0.35
SKP2-208ENST00000546211 K7ERJ3 54 aa12.84□□□□□ -0.35
SKP2-208ENST00000546211 TAX1BP3O14907 124 aa12.84□□□□□ -0.35
SKP2-208ENST00000546211 RAB37Q96AX2 223 aa12.83□□□□□ -0.36
SKP2-208ENST00000546211 PPDPFQ9H3Y8 114 aa12.83□□□□□ -0.36
SKP2-208ENST00000546211 TRBV30A0A0K0K1B3 111 aa12.82□□□□□ -0.36
SKP2-208ENST00000546211 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
SKP2-208ENST00000546211 DNAH1Q9P2D7 4330 aa12.82□□□□□ -0.36
SKP2-208ENST00000546211 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
SKP2-208ENST00000546211 SOSTDC1Q6X4U4 206 aa12.81□□□□□ -0.36
SKP2-208ENST00000546211 LYSTQ99698 3801 aa12.81□□□□□ -0.36
SKP2-208ENST00000546211 C6orf48Q9UBA6 75 aa12.81□□□□□ -0.36
SKP2-208ENST00000546211 CFC1BP0CG36 223 aa12.81□□□□□ -0.36
SKP2-208ENST00000546211 CFC1P0CG37 223 aa12.81□□□□□ -0.36
SKP2-208ENST00000546211 Q6ZRU5 148 aa12.8□□□□□ -0.36
SKP2-208ENST00000546211 A0A0B4J2C4 111 aa12.79□□□□□ -0.36
SKP2-208ENST00000546211 M0R2N4 97 aa12.79□□□□□ -0.36
SKP2-208ENST00000546211 LECT2O14960 151 aa12.79□□□□□ -0.36
SKP2-208ENST00000546211 SYCNQ0VAF6 134 aa12.79□□□□□ -0.36
SKP2-208ENST00000546211 A0A1B0GV90 55 aa12.78□□□□□ -0.36
SKP2-208ENST00000546211 LY6G6CO95867 125 aa12.78□□□□□ -0.36
SKP2-208ENST00000546211 PRO1854Q9UHT4 67 aa12.77□□□□□ -0.37
SKP2-208ENST00000546211 C9orf118A6NHY6 69 aa12.76□□□□□ -0.37
SKP2-208ENST00000546211 SND1-IT1Q9HBX3 110 aa12.76□□□□□ -0.37
SKP2-208ENST00000546211 TENM2Q9NT68 2774 aa12.75□□□□□ -0.37
SKP2-208ENST00000546211 LINC00476Q8WZB0 136 aa12.75□□□□□ -0.37
SKP2-208ENST00000546211 CARD19Q96LW7 228 aa12.75□□□□□ -0.37
SKP2-208ENST00000546211 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
SKP2-208ENST00000546211 VPS13DQ5THJ4 4388 aa12.74□□□□□ -0.37
SKP2-208ENST00000546211 TGP01266 2768 aa12.74□□□□□ -0.37
SKP2-208ENST00000546211 LOC107984156A0A0G2JMH3 177 aa12.73□□□□□ -0.37
SKP2-208ENST00000546211 H3BUT2 72 aa12.73□□□□□ -0.37
SKP2-208ENST00000546211 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
SKP2-208ENST00000546211 Q6ZR54 194 aa12.73□□□□□ -0.37
SKP2-208ENST00000546211 ARL17AQ8IVW1 177 aa12.73□□□□□ -0.37
SKP2-208ENST00000546211 WFDC2Q14508 124 aa12.73□□□□□ -0.37
SKP2-208ENST00000546211 RNF151Q2KHN1 245 aa12.73□□□□□ -0.37
SKP2-208ENST00000546211 Q6ZRN7 208 aaPredicted RBP12.73□□□□□ -0.37
SKP2-208ENST00000546211 NAA38Q9BRA0 125 aaKnown RBP12.72□□□□□ -0.37
SKP2-208ENST00000546211 NDUFC2-KCTD14E9PQ53 114 aa12.71□□□□□ -0.37
SKP2-208ENST00000546211 SLPIP03973 132 aa12.7□□□□□ -0.38
SKP2-208ENST00000546211 TSPAN13O95857 204 aa12.69□□□□□ -0.38
SKP2-208ENST00000546211 H7C2G1 150 aa12.68□□□□□ -0.38
SKP2-208ENST00000546211 Q1RN00 199 aa12.68□□□□□ -0.38
SKP2-208ENST00000546211 TRAV13-2A0A0B4J235 113 aa12.67□□□□□ -0.38
SKP2-208ENST00000546211 A0A1W2PPM0 123 aa12.67□□□□□ -0.38
SKP2-208ENST00000546211 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
SKP2-208ENST00000546211 NDUFC2O95298 119 aa12.67□□□□□ -0.38
SKP2-208ENST00000546211 RPL13AP40429 203 aaKnown RBP12.67□□□□□ -0.38
SKP2-208ENST00000546211 VAMP3Q15836 100 aa12.66□□□□□ -0.38
SKP2-208ENST00000546211 XAGE1AQ9HD64 81 aa12.66□□□□□ -0.38
SKP2-208ENST00000546211 IGKV2-28A0A075B6P5 120 aa12.65□□□□□ -0.38
SKP2-208ENST00000546211 IGKV2D-28P01615 120 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms