RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 MIR7-3HGQ8N6C7 128 aa16.24■□□□□ 0.19
FOXA1-202ENST00000545425 SND1-IT1Q9HBX3 110 aa16.24■□□□□ 0.19
FOXA1-202ENST00000545425 LINC00959A0A1B0GUT2 108 aa16.24■□□□□ 0.19
FOXA1-202ENST00000545425 LYRM9A8MSI8 78 aa16.24■□□□□ 0.19
FOXA1-202ENST00000545425 PRO0255Q9UI72 69 aa16.24■□□□□ 0.19
FOXA1-202ENST00000545425 H0YGX0 51 aa16.23■□□□□ 0.19
FOXA1-202ENST00000545425 SS18Q15532 418 aa16.23■□□□□ 0.19
FOXA1-202ENST00000545425 C15orf53Q8NAA6 179 aa16.22■□□□□ 0.19
FOXA1-202ENST00000545425 MGAM2Q2M2H8 2515 aa16.22■□□□□ 0.19
FOXA1-202ENST00000545425 LINC00158P58513 81 aa16.21■□□□□ 0.19
FOXA1-202ENST00000545425 ANAPC13Q9BS18 74 aa16.21■□□□□ 0.19
FOXA1-202ENST00000545425 TOMM7Q9P0U1 55 aa16.21■□□□□ 0.19
FOXA1-202ENST00000545425 INAFM2P0DMQ5 153 aa16.2■□□□□ 0.18
FOXA1-202ENST00000545425 KRTAP10-3P60369 221 aa16.2■□□□□ 0.18
FOXA1-202ENST00000545425 GYPEP15421 78 aa16.19■□□□□ 0.18
FOXA1-202ENST00000545425 C9orf66Q5T8R8 295 aa16.19■□□□□ 0.18
FOXA1-202ENST00000545425 Q8IZM0 81 aa16.19■□□□□ 0.18
FOXA1-202ENST00000545425 BAALC-AS2P0C853 105 aa16.18■□□□□ 0.18
FOXA1-202ENST00000545425 X6R8D5 127 aa16.18■□□□□ 0.18
FOXA1-202ENST00000545425 DEFB130BP0DP73 79 aa16.17■□□□□ 0.18
FOXA1-202ENST00000545425 DEFB130AP0DP74 79 aa16.17■□□□□ 0.18
FOXA1-202ENST00000545425 WNK1Q9H4A3 2382 aa16.17■□□□□ 0.18
FOXA1-202ENST00000545425 TTC32Q5I0X7 151 aa16.17■□□□□ 0.18
FOXA1-202ENST00000545425 IMUPQ9GZP8 106 aa16.17■□□□□ 0.18
FOXA1-202ENST00000545425 CCL18P55774 89 aa16.16■□□□□ 0.18
FOXA1-202ENST00000545425 IGKV2-28A0A075B6P5 120 aa16.15■□□□□ 0.18
FOXA1-202ENST00000545425 IGKV2D-28P01615 120 aa16.15■□□□□ 0.18
FOXA1-202ENST00000545425 CXCL5P42830 114 aa16.15■□□□□ 0.18
FOXA1-202ENST00000545425 LINC00337Q8N6G1 96 aa16.15■□□□□ 0.18
FOXA1-202ENST00000545425 IGKV3OR2-268A0A0C4DH90 116 aa16.15■□□□□ 0.18
FOXA1-202ENST00000545425 TRBV7-7A0A0K0K1E9 115 aa16.15■□□□□ 0.18
FOXA1-202ENST00000545425 C6orf226Q5I0X4 101 aa16.15■□□□□ 0.18
FOXA1-202ENST00000545425 NDUFV3P56181 108 aaKnown RBP16.14■□□□□ 0.17
FOXA1-202ENST00000545425 PKD1L1Q8TDX9 2849 aa16.13■□□□□ 0.17
FOXA1-202ENST00000545425 APOC4P55056 127 aa16.12■□□□□ 0.17
FOXA1-202ENST00000545425 C5orf38Q86SI9 138 aa16.12■□□□□ 0.17
FOXA1-202ENST00000545425 DNAL4O96015 105 aa16.12■□□□□ 0.17
FOXA1-202ENST00000545425 TRRAPQ9Y4A5 3859 aa16.11■□□□□ 0.17
FOXA1-202ENST00000545425 PAX4O43316 350 aa16.11■□□□□ 0.17
FOXA1-202ENST00000545425 COX17Q14061 63 aa16.11■□□□□ 0.17
FOXA1-202ENST00000545425 MALP21145 153 aa16.1■□□□□ 0.17
FOXA1-202ENST00000545425 MUC7Q8TAX7 377 aa16.1■□□□□ 0.17
FOXA1-202ENST00000545425 SMIM11BQ8TCY0 68 aa16.1■□□□□ 0.17
FOXA1-202ENST00000545425 LINC00643Q86TS7 51 aa16.09■□□□□ 0.17
FOXA1-202ENST00000545425 FAM218AQ96MZ4 157 aa16.09■□□□□ 0.17
FOXA1-202ENST00000545425 A0A1B0GX51 115 aa16.08■□□□□ 0.17
FOXA1-202ENST00000545425 CD164L2Q6UWJ8 174 aa16.08■□□□□ 0.17
FOXA1-202ENST00000545425 SDIM1Q6ZPB5 146 aa16.08■□□□□ 0.17
FOXA1-202ENST00000545425 NDUFC2O95298 119 aa16.07■□□□□ 0.16
FOXA1-202ENST00000545425 XCL1P47992 114 aa16.05■□□□□ 0.16
FOXA1-202ENST00000545425 PFN2P35080 140 aa16.04■□□□□ 0.16
FOXA1-202ENST00000545425 MIFP14174 115 aa16.03■□□□□ 0.16
FOXA1-202ENST00000545425 C22orf24Q9Y442 160 aa16.03■□□□□ 0.16
FOXA1-202ENST00000545425 IGHV4-28A0A0C4DH34 117 aa16.03■□□□□ 0.16
FOXA1-202ENST00000545425 NHLRC4P0CG21 123 aaPredicted RBP16.03■□□□□ 0.16
FOXA1-202ENST00000545425 CFAP161Q6P656 301 aa16.02■□□□□ 0.16
FOXA1-202ENST00000545425 VWFP04275 2813 aa16.01■□□□□ 0.15
FOXA1-202ENST00000545425 OBSCN-AS1Q96MR7 158 aa16.01■□□□□ 0.15
FOXA1-202ENST00000545425 ATP5G1P05496 136 aa16■□□□□ 0.15
FOXA1-202ENST00000545425 DAD1P61803 113 aa16■□□□□ 0.15
FOXA1-202ENST00000545425 NOTCH3Q9UM47 2321 aa15.99■□□□□ 0.15
FOXA1-202ENST00000545425 KIAA0087Q14695 138 aa15.98■□□□□ 0.15
FOXA1-202ENST00000545425 OR13C6PQ8NH95 151 aa15.98■□□□□ 0.15
FOXA1-202ENST00000545425 MEGF8Q7Z7M0 2845 aa15.98■□□□□ 0.15
FOXA1-202ENST00000545425 A0A087WYN8 130 aa15.96■□□□□ 0.15
FOXA1-202ENST00000545425 CHCHD10Q8WYQ3 142 aaPredicted RBP15.96■□□□□ 0.15
FOXA1-202ENST00000545425 Q9HAA7 133 aa15.96■□□□□ 0.15
FOXA1-202ENST00000545425 REG3AQ06141 175 aa15.96■□□□□ 0.14
FOXA1-202ENST00000545425 LINC00167Q96N53 147 aa15.96■□□□□ 0.14
FOXA1-202ENST00000545425 LINC00269Q8N2A0 174 aa15.95■□□□□ 0.14
FOXA1-202ENST00000545425 TMEM126AQ9H061 195 aa15.95■□□□□ 0.14
FOXA1-202ENST00000545425 LELP1Q5T871 98 aa15.94■□□□□ 0.14
FOXA1-202ENST00000545425 SPART-AS1P0CW21 52 aa15.94■□□□□ 0.14
FOXA1-202ENST00000545425 ORMDL1Q9P0S3 153 aa15.94■□□□□ 0.14
FOXA1-202ENST00000545425 KLK5Q9Y337 293 aaPredicted RBP15.94■□□□□ 0.14
FOXA1-202ENST00000545425 DEFB135Q30KP9 77 aa15.93■□□□□ 0.14
FOXA1-202ENST00000545425 NOTCH1P46531 2555 aa15.92■□□□□ 0.14
FOXA1-202ENST00000545425 LECT2O14960 151 aa15.92■□□□□ 0.14
FOXA1-202ENST00000545425 WIPF1O43516 503 aa15.92■□□□□ 0.14
FOXA1-202ENST00000545425 ANGP03950 147 aaKnown RBP15.92■□□□□ 0.14
FOXA1-202ENST00000545425 Q8NAQ8 132 aa15.92■□□□□ 0.14
FOXA1-202ENST00000545425 GAGE2AQ6NT46 116 aa15.9■□□□□ 0.14
FOXA1-202ENST00000545425 C11orf68Q9H3H3 251 aaKnown RBP15.89■□□□□ 0.13
FOXA1-202ENST00000545425 JMJD7-PLA2G4BH0Y9G9 81 aa15.88■□□□□ 0.13
FOXA1-202ENST00000545425 CLPSL2Q6UWE3 100 aa15.88■□□□□ 0.13
FOXA1-202ENST00000545425 WFDC9Q8NEX5 89 aa15.88■□□□□ 0.13
FOXA1-202ENST00000545425 SMCR5Q8TEV8 140 aa15.88■□□□□ 0.13
FOXA1-202ENST00000545425 A0A096LPF7 62 aa15.87■□□□□ 0.13
FOXA1-202ENST00000545425 PRR34Q9NV39 138 aa15.85■□□□□ 0.13
FOXA1-202ENST00000545425 A0A0J9YWU9 116 aa15.84■□□□□ 0.13
FOXA1-202ENST00000545425 TMEM256-PLSCR3K7ERE1 68 aa15.84■□□□□ 0.13
FOXA1-202ENST00000545425 IGHV4-30-4P0DP06 118 aa15.84■□□□□ 0.13
FOXA1-202ENST00000545425 H3BQ85 93 aa15.84■□□□□ 0.13
FOXA1-202ENST00000545425 CMYA5Q8N3K9 4069 aa15.84■□□□□ 0.13
FOXA1-202ENST00000545425 GVQW2A0A096LPI5 108 aaPredicted RBP15.83■□□□□ 0.12
FOXA1-202ENST00000545425 NANOS2P60321 138 aaKnown RBP15.83■□□□□ 0.12
FOXA1-202ENST00000545425 KPRPQ5T749 579 aaPredicted RBP15.83■□□□□ 0.12
FOXA1-202ENST00000545425 Q8N814 137 aa15.83■□□□□ 0.12
FOXA1-202ENST00000545425 H3BNG1 76 aa15.81■□□□□ 0.12
FOXA1-202ENST00000545425 S100A7L2Q5SY68 101 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms