RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
CPSF7-223ENST00000544669 KLK5Q9Y337 293 aaPredicted RBP9□□□□□ -0.97
CPSF7-223ENST00000544669 ANGP03950 147 aaKnown RBP8.99□□□□□ -0.97
CPSF7-223ENST00000544669 NHLRC4P0CG21 123 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-223ENST00000544669 S100A7L2Q5SY68 101 aa8.99□□□□□ -0.97
CPSF7-223ENST00000544669 TMEM256-PLSCR3K7ERE1 68 aa8.98□□□□□ -0.97
CPSF7-223ENST00000544669 Q9HAA7 133 aa8.98□□□□□ -0.97
CPSF7-223ENST00000544669 ABCA12Q86UK0 2595 aa8.98□□□□□ -0.97
CPSF7-223ENST00000544669 LECT2O14960 151 aa8.98□□□□□ -0.97
CPSF7-223ENST00000544669 GAGE2AQ6NT46 116 aa8.98□□□□□ -0.97
CPSF7-223ENST00000544669 ITPR3Q14573 2671 aa8.97□□□□□ -0.97
CPSF7-223ENST00000544669 A0A087WYN8 130 aa8.97□□□□□ -0.97
CPSF7-223ENST00000544669 GHRHP01286 108 aa8.97□□□□□ -0.97
CPSF7-223ENST00000544669 KIAA0087Q14695 138 aa8.97□□□□□ -0.97
CPSF7-223ENST00000544669 LINC00167Q96N53 147 aa8.97□□□□□ -0.97
CPSF7-223ENST00000544669 WIPF1O43516 503 aa8.96□□□□□ -0.97
CPSF7-223ENST00000544669 DEFB135Q30KP9 77 aa8.96□□□□□ -0.97
CPSF7-223ENST00000544669 C22orf24Q9Y442 160 aa8.96□□□□□ -0.97
CPSF7-223ENST00000544669 APCP25054 2843 aa8.96□□□□□ -0.97
CPSF7-223ENST00000544669 WFDC9Q8NEX5 89 aa8.96□□□□□ -0.98
CPSF7-223ENST00000544669 ZFYVE26Q68DK2 2539 aa8.94□□□□□ -0.98
CPSF7-223ENST00000544669 A0A0J9YWU9 116 aa8.94□□□□□ -0.98
CPSF7-223ENST00000544669 H3BNG1 76 aa8.94□□□□□ -0.98
CPSF7-223ENST00000544669 IGHV4-30-4P0DP06 118 aa8.94□□□□□ -0.98
CPSF7-223ENST00000544669 Q8NAQ8 132 aa8.94□□□□□ -0.98
CPSF7-223ENST00000544669 C11orf68Q9H3H3 251 aaKnown RBP8.94□□□□□ -0.98
CPSF7-223ENST00000544669 Q8N814 137 aa8.94□□□□□ -0.98
CPSF7-223ENST00000544669 CHD6Q8TD26 2715 aa8.93□□□□□ -0.98
CPSF7-223ENST00000544669 A0A096LPF7 62 aa8.93□□□□□ -0.98
CPSF7-223ENST00000544669 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
CPSF7-223ENST00000544669 CLPSL2Q6UWE3 100 aa8.93□□□□□ -0.98
CPSF7-223ENST00000544669 PRR34Q9NV39 138 aa8.93□□□□□ -0.98
CPSF7-223ENST00000544669 WNK1Q9H4A3 2382 aa8.93□□□□□ -0.98
CPSF7-223ENST00000544669 CENPEQ02224 2701 aa8.92□□□□□ -0.98
CPSF7-223ENST00000544669 Q6JHZ5 121 aa8.92□□□□□ -0.98
CPSF7-223ENST00000544669 CSMD2Q7Z408 3487 aa8.92□□□□□ -0.98
CPSF7-223ENST00000544669 B5MCH6 92 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 SMR3AQ99954 134 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 FAM236AA0A1B0GUQ0 79 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 FAM236BA0A1B0GV22 79 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 CCKP06307 115 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 ATP5EP2Q5VTU8 51 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 EPG5Q9HCE0 2579 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 TLN2Q9Y4G6 2542 aa8.91□□□□□ -0.98
CPSF7-223ENST00000544669 SMCR5Q8TEV8 140 aa8.9□□□□□ -0.98
CPSF7-223ENST00000544669 C14orf132Q9NPU4 83 aa8.9□□□□□ -0.98
CPSF7-223ENST00000544669 ATOX1O00244 68 aa8.89□□□□□ -0.99
CPSF7-223ENST00000544669 SONP18583 2426 aaKnown RBP8.89□□□□□ -0.99
CPSF7-223ENST00000544669 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
CPSF7-223ENST00000544669 INAFM1C9JVW0 142 aa8.89□□□□□ -0.99
CPSF7-223ENST00000544669 F8WDY8 70 aa8.89□□□□□ -0.99
CPSF7-223ENST00000544669 PDE6GP18545 87 aa8.89□□□□□ -0.99
CPSF7-223ENST00000544669 IGLV10-54A0A075B6I4 117 aa8.88□□□□□ -0.99
CPSF7-223ENST00000544669 UQCRQO14949 82 aa8.88□□□□□ -0.99
CPSF7-223ENST00000544669 CCDC179H3BU77 68 aa8.87□□□□□ -0.99
CPSF7-223ENST00000544669 NANOS2P60321 138 aaKnown RBP8.87□□□□□ -0.99
CPSF7-223ENST00000544669 DEFB4AO15263 64 aa8.87□□□□□ -0.99
CPSF7-223ENST00000544669 LINC00575Q6W349 94 aa8.87□□□□□ -0.99
CPSF7-223ENST00000544669 HIVEP2P31629 2446 aa8.86□□□□□ -0.99
CPSF7-223ENST00000544669 CYSRT1A8MQ03 144 aa8.86□□□□□ -0.99
CPSF7-223ENST00000544669 hADV29S1A0JD25 119 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 NCR3O14931 201 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 HTN3P15516 51 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 C6orf99Q4VX62 202 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 KLK12Q9UKR0 248 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 CELA1Q9UNI1 258 aa8.85□□□□□ -0.99
CPSF7-223ENST00000544669 TRBV7-6A0A0J9YX20 115 aa8.84□□□□□ -0.99
CPSF7-223ENST00000544669 TRBV10-3A0A0K0K1G6 114 aa8.84□□□□□ -0.99
CPSF7-223ENST00000544669 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
CPSF7-223ENST00000544669 IGLV6-57P01721 117 aa8.84□□□□□ -0.99
CPSF7-223ENST00000544669 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
CPSF7-223ENST00000544669 CCDC168Q8NDH2 2452 aa8.84□□□□□ -1
CPSF7-223ENST00000544669 PDZD2O15018 2839 aa8.84□□□□□ -1
CPSF7-223ENST00000544669 SLPIP03973 132 aa8.83□□□□□ -1
CPSF7-223ENST00000544669 UNQ6190/PRO20217Q6UXQ8 127 aa8.83□□□□□ -1
CPSF7-223ENST00000544669 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
CPSF7-223ENST00000544669 UBL5Q9BZL1 73 aa8.83□□□□□ -1
CPSF7-223ENST00000544669 LINC00846Q9NV44 126 aa8.83□□□□□ -1
CPSF7-223ENST00000544669 ENHOQ6UWT2 76 aa8.82□□□□□ -1
CPSF7-223ENST00000544669 NOTCH3Q9UM47 2321 aa8.82□□□□□ -1
CPSF7-223ENST00000544669 COX7CP15954 63 aa8.82□□□□□ -1
CPSF7-223ENST00000544669 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
CPSF7-223ENST00000544669 RBM3P98179 157 aaKnown RBP8.82□□□□□ -1
CPSF7-223ENST00000544669 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
CPSF7-223ENST00000544669 SS18L2Q9UHA2 77 aa8.82□□□□□ -1
CPSF7-223ENST00000544669 LOC110117498A0A087WWA1 95 aa8.81□□□□□ -1
CPSF7-223ENST00000544669 EGFEM1PQ0D2K5 195 aa8.81□□□□□ -1
CPSF7-223ENST00000544669 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
CPSF7-223ENST00000544669 C2orf48Q96LS8 159 aa8.81□□□□□ -1
CPSF7-223ENST00000544669 C9orf153Q5TBE3 101 aa8.8□□□□□ -1
CPSF7-223ENST00000544669 DIRC1Q969H9 104 aa8.8□□□□□ -1
CPSF7-223ENST00000544669 C2CD3Q4AC94 2353 aa8.8□□□□□ -1
CPSF7-223ENST00000544669 AKAP9Q99996 3911 aa8.8□□□□□ -1
CPSF7-223ENST00000544669 C9orf129Q5T035 196 aaKnown RBP8.8□□□□□ -1
CPSF7-223ENST00000544669 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.8□□□□□ -1
CPSF7-223ENST00000544669 C6orf223Q8N319 242 aa8.79□□□□□ -1
CPSF7-223ENST00000544669 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms