RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 LOC110117498A0A087WWA1 95 aa5.6□□□□□ -1.51
VPS13D-211ENST00000543710 ZFYVE26Q68DK2 2539 aa5.6□□□□□ -1.51
VPS13D-211ENST00000543710 LINC00310P59036 64 aa5.59□□□□□ -1.51
VPS13D-211ENST00000543710 FAM19A5Q7Z5A7 132 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-211ENST00000543710 IGLV5-45A0A087WSX0 123 aa5.59□□□□□ -1.51
VPS13D-211ENST00000543710 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.52
VPS13D-211ENST00000543710 CCDC179H3BU77 68 aa5.59□□□□□ -1.52
VPS13D-211ENST00000543710 ERC2-IT1O76042 136 aa5.59□□□□□ -1.52
VPS13D-211ENST00000543710 LINC00575Q6W349 94 aa5.58□□□□□ -1.52
VPS13D-211ENST00000543710 Q6ZQY7 126 aa5.58□□□□□ -1.52
VPS13D-211ENST00000543710 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
VPS13D-211ENST00000543710 FHL2Q14192 279 aa5.58□□□□□ -1.52
VPS13D-211ENST00000543710 EXPH5Q8NEV8 1989 aa5.58□□□□□ -1.52
VPS13D-211ENST00000543710 SBSPONQ8IVN8 264 aa5.57□□□□□ -1.52
VPS13D-211ENST00000543710 DYSFO75923 2080 aa5.57□□□□□ -1.52
VPS13D-211ENST00000543710 CRYGAP11844 174 aa5.57□□□□□ -1.52
VPS13D-211ENST00000543710 SLPIP03973 132 aa5.57□□□□□ -1.52
VPS13D-211ENST00000543710 RPL37AP61513 92 aaKnown RBP5.57□□□□□ -1.52
VPS13D-211ENST00000543710 WFDC10BQ8IUB3 73 aa5.57□□□□□ -1.52
VPS13D-211ENST00000543710 Q6ZS46 218 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 HCG22E2RYF7 251 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 LINC00694P0DN24 101 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 CDSNQ15517 529 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 C1orf137Q5JT78 98 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 HRCT1Q6UXD1 115 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 Q6ZTC4 211 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 DOCK11Q5JSL3 2073 aa5.56□□□□□ -1.52
VPS13D-211ENST00000543710 CYSRT1A8MQ03 144 aa5.55□□□□□ -1.52
VPS13D-211ENST00000543710 WISP2O76076 250 aa5.55□□□□□ -1.52
VPS13D-211ENST00000543710 CELA1Q9UNI1 258 aa5.55□□□□□ -1.52
VPS13D-211ENST00000543710 SRCAPQ6ZRS2 3230 aa5.55□□□□□ -1.52
VPS13D-211ENST00000543710 AVPP01185 164 aa5.54□□□□□ -1.52
VPS13D-211ENST00000543710 HEATR5AQ86XA9 2040 aa5.54□□□□□ -1.52
VPS13D-211ENST00000543710 KIAA1549Q9HCM3 1950 aa5.54□□□□□ -1.52
VPS13D-211ENST00000543710 A0A087WYN8 130 aa5.54□□□□□ -1.52
VPS13D-211ENST00000543710 NBDYA0A0U1RRE5 68 aa5.54□□□□□ -1.52
VPS13D-211ENST00000543710 C11orf72Q8NBR9 251 aa5.53□□□□□ -1.52
VPS13D-211ENST00000543710 UTRNP46939 3433 aa5.53□□□□□ -1.52
VPS13D-211ENST00000543710 DEFB1P60022 68 aa5.53□□□□□ -1.52
VPS13D-211ENST00000543710 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
VPS13D-211ENST00000543710 KIF25-AS1Q9Y6Z4 181 aa5.52□□□□□ -1.53
VPS13D-211ENST00000543710 USP34Q70CQ2 3546 aa5.52□□□□□ -1.53
VPS13D-211ENST00000543710 GVQW2A0A096LPI5 108 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-211ENST00000543710 A0A096LNJ9 63 aa5.52□□□□□ -1.53
VPS13D-211ENST00000543710 KIAA2026Q5HYC2 2103 aa5.52□□□□□ -1.53
VPS13D-211ENST00000543710 WNK1Q9H4A3 2382 aa5.52□□□□□ -1.53
VPS13D-211ENST00000543710 RAI1Q7Z5J4 1906 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-211ENST00000543710 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
VPS13D-211ENST00000543710 COX6A2Q02221 97 aa5.52□□□□□ -1.53
VPS13D-211ENST00000543710 MED13LQ71F56 2210 aa5.51□□□□□ -1.53
VPS13D-211ENST00000543710 F8P00451 2351 aa5.51□□□□□ -1.53
VPS13D-211ENST00000543710 ODF3L2Q3SX64 289 aa5.51□□□□□ -1.53
VPS13D-211ENST00000543710 H0Y9P7 68 aa5.51□□□□□ -1.53
VPS13D-211ENST00000543710 CDIP1Q9H305 208 aa5.51□□□□□ -1.53
VPS13D-211ENST00000543710 SNURFQ9Y675 71 aa5.51□□□□□ -1.53
VPS13D-211ENST00000543710 ESRGQ1W209 222 aa5.5□□□□□ -1.53
VPS13D-211ENST00000543710 LINC01547P58512 204 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-211ENST00000543710 Q9BRP9 147 aa5.5□□□□□ -1.53
VPS13D-211ENST00000543710 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
VPS13D-211ENST00000543710 MED12Q93074 2177 aa5.5□□□□□ -1.53
VPS13D-211ENST00000543710 ELOF1P60002 83 aaKnown RBP5.5□□□□□ -1.53
VPS13D-211ENST00000543710 Q6ZVQ6 151 aa5.5□□□□□ -1.53
VPS13D-211ENST00000543710 GOLGB1Q14789 3259 aaKnown RBP5.49□□□□□ -1.53
VPS13D-211ENST00000543710 LINC01556Q5JQF7 62 aa5.49□□□□□ -1.53
VPS13D-211ENST00000543710 SCXQ7RTU7 201 aa5.49□□□□□ -1.53
VPS13D-211ENST00000543710 LYPD5Q6UWN5 251 aa5.48□□□□□ -1.53
VPS13D-211ENST00000543710 Q6ZRP5 223 aa5.48□□□□□ -1.53
VPS13D-211ENST00000543710 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
VPS13D-211ENST00000543710 LOC100131303A0A0U1RQF7 123 aa5.48□□□□□ -1.53
VPS13D-211ENST00000543710 C8orf87E5RJ46 101 aa5.48□□□□□ -1.53
VPS13D-211ENST00000543710 XAGE1AQ9HD64 81 aa5.48□□□□□ -1.53
VPS13D-211ENST00000543710 PCSK5Q92824 1860 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 FLNBO75369 2602 aaKnown RBP5.47□□□□□ -1.53
VPS13D-211ENST00000543710 IGKV2-28A0A075B6P5 120 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 K7EIL1 84 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 IGKV2D-28P01615 120 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 SOSTDC1Q6X4U4 206 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 ACYP2P14621 99 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 C10orf99Q6UWK7 81 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 C22orf34Q6ZV56 151 aa5.47□□□□□ -1.53
VPS13D-211ENST00000543710 RTL8CO15255 209 aa5.46□□□□□ -1.53
VPS13D-211ENST00000543710 PRR14LQ5THK1 2151 aa5.46□□□□□ -1.54
VPS13D-211ENST00000543710 IGLV4-60A0A075B6I1 120 aa5.46□□□□□ -1.54
VPS13D-211ENST00000543710 TNCP24821 2201 aa5.46□□□□□ -1.54
VPS13D-211ENST00000543710 C18orf65Q6ZTR6 163 aa5.46□□□□□ -1.54
VPS13D-211ENST00000543710 Q8N3U1 123 aa5.46□□□□□ -1.54
VPS13D-211ENST00000543710 ARHGAP21Q5T5U3 1957 aa5.45□□□□□ -1.54
VPS13D-211ENST00000543710 A8MZ25 164 aa5.45□□□□□ -1.54
VPS13D-211ENST00000543710 SORL1Q92673 2214 aa5.45□□□□□ -1.54
VPS13D-211ENST00000543710 MOBPQ13875 183 aa5.45□□□□□ -1.54
VPS13D-211ENST00000543710 UNQ6190/PRO20217Q6UXQ8 127 aa5.44□□□□□ -1.54
VPS13D-211ENST00000543710 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
VPS13D-211ENST00000543710 Q6ZQT0 140 aa5.44□□□□□ -1.54
VPS13D-211ENST00000543710 MED13Q9UHV7 2174 aa5.44□□□□□ -1.54
VPS13D-211ENST00000543710 GAS8-AS1O95177 125 aa5.44□□□□□ -1.54
VPS13D-211ENST00000543710 Q8NBF4 154 aa5.44□□□□□ -1.54
VPS13D-211ENST00000543710 CIRBP-AS1Q8TBR5 109 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms