RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RPL37AP61513 92 aaKnown RBP6.1□□□□□ -1.43
YBX3-212ENST00000542002 RNF151Q2KHN1 245 aa6.1□□□□□ -1.43
YBX3-212ENST00000542002 PDZD11Q5EBL8 140 aa6.1□□□□□ -1.43
YBX3-212ENST00000542002 PAPPA-AS1Q5QFB9 102 aa6.1□□□□□ -1.43
YBX3-212ENST00000542002 LINC01561Q8N1V8 128 aa6.1□□□□□ -1.43
YBX3-212ENST00000542002 TINCRA0A1B0GVN0 87 aa6.09□□□□□ -1.43
YBX3-212ENST00000542002 F8WDY8 70 aa6.09□□□□□ -1.43
YBX3-212ENST00000542002 TRGC2P03986 189 aa6.09□□□□□ -1.43
YBX3-212ENST00000542002 HERVK_113P63121 156 aa6.09□□□□□ -1.43
YBX3-212ENST00000542002 PMVKQ15126 192 aa6.09□□□□□ -1.43
YBX3-212ENST00000542002 C9orf116Q5BN46 136 aaPredicted RBP6.09□□□□□ -1.43
YBX3-212ENST00000542002 Q6ZRP5 223 aa6.09□□□□□ -1.43
YBX3-212ENST00000542002 IGLV5-45A0A087WSX0 123 aa6.08□□□□□ -1.44
YBX3-212ENST00000542002 LINC01549A6NIU2 74 aa6.08□□□□□ -1.44
YBX3-212ENST00000542002 NDUFA1O15239 70 aa6.08□□□□□ -1.44
YBX3-212ENST00000542002 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
YBX3-212ENST00000542002 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
YBX3-212ENST00000542002 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
YBX3-212ENST00000542002 FAM168BA1KXE4 195 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 SMIM1B2RUZ4 78 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 SCO1O75880 301 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 HBDP02042 147 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 LINC00310P59036 64 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 SEC11AP67812 179 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 RPL18AQ02543 176 aaKnown RBP6.07□□□□□ -1.44
YBX3-212ENST00000542002 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 KRTAP7-1Q8IUC3 87 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 LINC00469Q8N7U9 141 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 TOMM7Q9P0U1 55 aa6.07□□□□□ -1.44
YBX3-212ENST00000542002 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 NUPR1O60356 82 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 SPINK8P0C7L1 97 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 TLX1NBP0CAT3 122 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 NDUFA6P56556 154 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 RAB5BP61020 215 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 Q8IZM0 81 aa6.06□□□□□ -1.44
YBX3-212ENST00000542002 TRBV30A0A0K0K1B3 111 aa6.05□□□□□ -1.44
YBX3-212ENST00000542002 IGLC3P0DOY3 106 aa6.05□□□□□ -1.44
YBX3-212ENST00000542002 GAGE2EQ4V326 116 aa6.05□□□□□ -1.44
YBX3-212ENST00000542002 KRTAP11-1Q8IUC1 163 aa6.05□□□□□ -1.44
YBX3-212ENST00000542002 FAM19A2Q8N3H0 131 aa6.05□□□□□ -1.44
YBX3-212ENST00000542002 CHCHD1Q96BP2 118 aaKnown RBP6.05□□□□□ -1.44
YBX3-212ENST00000542002 GAGE2DQ9UEU5 116 aa6.05□□□□□ -1.44
YBX3-212ENST00000542002 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
YBX3-212ENST00000542002 PRSS2P07478 247 aa6.04□□□□□ -1.44
YBX3-212ENST00000542002 CKS1BP61024 79 aa6.04□□□□□ -1.44
YBX3-212ENST00000542002 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
YBX3-212ENST00000542002 PHF5AQ7RTV0 110 aaKnown RBP6.04□□□□□ -1.44
YBX3-212ENST00000542002 PACRGQ96M98 296 aaPredicted RBP6.04□□□□□ -1.44
YBX3-212ENST00000542002 PKIGQ9Y2B9 76 aa6.04□□□□□ -1.44
YBX3-212ENST00000542002 C11orf86A6NJI1 115 aa6.03□□□□□ -1.44
YBX3-212ENST00000542002 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
YBX3-212ENST00000542002 ATP5LO75964 103 aa6.03□□□□□ -1.44
YBX3-212ENST00000542002 ZNF22P17026 224 aaPredicted RBP6.03□□□□□ -1.44
YBX3-212ENST00000542002 PRR3P79522 188 aaKnown RBP6.03□□□□□ -1.44
YBX3-212ENST00000542002 BAGE3Q86Y29 109 aa6.03□□□□□ -1.44
YBX3-212ENST00000542002 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
YBX3-212ENST00000542002 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
YBX3-212ENST00000542002 IGLV5-39A0A0G2JS06 123 aa6.02□□□□□ -1.45
YBX3-212ENST00000542002 F8VRH5 84 aa6.02□□□□□ -1.45
YBX3-212ENST00000542002 SERF1AO75920 110 aa6.02□□□□□ -1.45
YBX3-212ENST00000542002 SRSF9Q13242 221 aaKnown RBP eCLIP6.01□□□□□ -1.45
YBX3-212ENST00000542002 IFI27L1Q96BM0 104 aa6.01□□□□□ -1.45
YBX3-212ENST00000542002 CHTOPQ9Y3Y2 248 aaKnown RBP6.01□□□□□ -1.45
YBX3-212ENST00000542002 HSBP1O75506 76 aa6□□□□□ -1.45
YBX3-212ENST00000542002 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
YBX3-212ENST00000542002 FAM19A5Q7Z5A7 132 aaPredicted RBP6□□□□□ -1.45
YBX3-212ENST00000542002 XAGE1AQ9HD64 81 aa6□□□□□ -1.45
YBX3-212ENST00000542002 PSORS1C2Q9UIG4 136 aa6□□□□□ -1.45
YBX3-212ENST00000542002 TNXBP22105 4242 aa6□□□□□ -1.45
YBX3-212ENST00000542002 TRAV12-1A0A0B4J245 112 aa5.99□□□□□ -1.45
YBX3-212ENST00000542002 H3BRM9 83 aa5.99□□□□□ -1.45
YBX3-212ENST00000542002 OXTP01178 125 aa5.98□□□□□ -1.45
YBX3-212ENST00000542002 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
YBX3-212ENST00000542002 CXCL5P42830 114 aa5.98□□□□□ -1.45
YBX3-212ENST00000542002 TMEM170BQ5T4T1 132 aa5.98□□□□□ -1.45
YBX3-212ENST00000542002 TMEM223A0PJW6 202 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BKO60814 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BJP06899 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BOP23527 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BBP33778 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BDP58876 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BCP62807 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 ODF1Q14990 250 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST2H2BEQ16778 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BHQ93079 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BNQ99877 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 HIST1H2BMQ99879 126 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
YBX3-212ENST00000542002 H0Y8G0 127 aa5.96□□□□□ -1.46
YBX3-212ENST00000542002 M0QXV9 152 aa5.96□□□□□ -1.46
YBX3-212ENST00000542002 LEPROTL1O95214 131 aa5.96□□□□□ -1.46
YBX3-212ENST00000542002 FABP4P15090 132 aa5.96□□□□□ -1.46
YBX3-212ENST00000542002 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
YBX3-212ENST00000542002 PFN2P35080 140 aa5.95□□□□□ -1.46
YBX3-212ENST00000542002 C1orf137Q5JT78 98 aa5.95□□□□□ -1.46
YBX3-212ENST00000542002 SPINK6Q6UWN8 80 aa5.95□□□□□ -1.46
YBX3-212ENST00000542002 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms