RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 COX6A2Q02221 97 aa11.1□□□□□ -0.63
HMGA2-210ENST00000541363 LINC00242Q5T6M2 205 aa11.08□□□□□ -0.64
HMGA2-210ENST00000541363 C10orf99Q6UWK7 81 aa11.08□□□□□ -0.64
HMGA2-210ENST00000541363 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
HMGA2-210ENST00000541363 IGIPA6NJ69 53 aa11.08□□□□□ -0.64
HMGA2-210ENST00000541363 SMIM1B2RUZ4 78 aa11.08□□□□□ -0.64
HMGA2-210ENST00000541363 PRM2P04554 102 aa11.07□□□□□ -0.64
HMGA2-210ENST00000541363 PRR9Q5T870 116 aa11.07□□□□□ -0.64
HMGA2-210ENST00000541363 ATP11AUNQ6ZP68 121 aa11.07□□□□□ -0.64
HMGA2-210ENST00000541363 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
HMGA2-210ENST00000541363 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
HMGA2-210ENST00000541363 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
HMGA2-210ENST00000541363 PLA2G5P39877 138 aa11.04□□□□□ -0.64
HMGA2-210ENST00000541363 C19orf84I3L1E1 186 aa11.03□□□□□ -0.64
HMGA2-210ENST00000541363 Q8NA96 180 aa11.03□□□□□ -0.64
HMGA2-210ENST00000541363 SMIM29Q86T20 159 aa11.03□□□□□ -0.64
HMGA2-210ENST00000541363 BRWD1-AS2P59051 145 aa11.01□□□□□ -0.65
HMGA2-210ENST00000541363 FAM208BQ5VWN6 2430 aa11.01□□□□□ -0.65
HMGA2-210ENST00000541363 Q8N2B8 174 aa11.01□□□□□ -0.65
HMGA2-210ENST00000541363 C1orf229Q6ZS94 237 aaPredicted RBP11.01□□□□□ -0.65
HMGA2-210ENST00000541363 SSBP3-AS1Q7Z2R9 100 aa11.01□□□□□ -0.65
HMGA2-210ENST00000541363 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
HMGA2-210ENST00000541363 C11orf21Q9P2W6 132 aa11□□□□□ -0.65
HMGA2-210ENST00000541363 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 ZNF295-AS1Q8N0V1 137 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 IGLV8-61A0A075B6I0 122 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 IGLV4-60A0A075B6I1 120 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 SPACA4Q8TDM5 124 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 GAS8-AS1O95177 125 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 LINC01561Q8N1V8 128 aa10.98□□□□□ -0.65
HMGA2-210ENST00000541363 IGLV1-40P01703 118 aa10.97□□□□□ -0.65
HMGA2-210ENST00000541363 ADAMTSL4-AS1Q5T5F5 129 aa10.97□□□□□ -0.65
HMGA2-210ENST00000541363 SMCR5Q8TEV8 140 aa10.97□□□□□ -0.65
HMGA2-210ENST00000541363 C11orf71Q6IPW1 123 aa10.95□□□□□ -0.66
HMGA2-210ENST00000541363 FHL2Q14192 279 aa10.94□□□□□ -0.66
HMGA2-210ENST00000541363 LINC00313P59037 77 aa10.94□□□□□ -0.66
HMGA2-210ENST00000541363 PTPN13Q12923 2485 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 TSPEAR-AS2P59090 65 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 C4orf26Q17RF5 130 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 A0A1B0GUV1 79 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 H3BPC8 53 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 A8MTW9 85 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 CUL9Q8IWT3 2517 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 MOBPQ13875 183 aa10.93□□□□□ -0.66
HMGA2-210ENST00000541363 AMELXQ99217 191 aa10.92□□□□□ -0.66
HMGA2-210ENST00000541363 KIAA0087Q14695 138 aa10.92□□□□□ -0.66
HMGA2-210ENST00000541363 CRIPTQ9P021 101 aa10.92□□□□□ -0.66
HMGA2-210ENST00000541363 BRI3O95415 125 aa10.92□□□□□ -0.66
HMGA2-210ENST00000541363 TRAV22A0A0B4J277 110 aa10.92□□□□□ -0.66
HMGA2-210ENST00000541363 SONP18583 2426 aaKnown RBP10.91□□□□□ -0.66
HMGA2-210ENST00000541363 C22orf24Q9Y442 160 aa10.91□□□□□ -0.66
HMGA2-210ENST00000541363 RPS28P62857 69 aaKnown RBP10.89□□□□□ -0.67
HMGA2-210ENST00000541363 BCE1O60756 84 aa10.89□□□□□ -0.67
HMGA2-210ENST00000541363 Q6ZRU5 148 aa10.88□□□□□ -0.67
HMGA2-210ENST00000541363 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
HMGA2-210ENST00000541363 Q6ZPA2 131 aa10.88□□□□□ -0.67
HMGA2-210ENST00000541363 A0A1W2PNU3 283 aaPredicted RBP10.87□□□□□ -0.67
HMGA2-210ENST00000541363 SPATA3Q8NHX4 192 aa10.86□□□□□ -0.67
HMGA2-210ENST00000541363 A0A1B0GW54 56 aa10.85□□□□□ -0.67
HMGA2-210ENST00000541363 WISP2O76076 250 aa10.85□□□□□ -0.67
HMGA2-210ENST00000541363 ODF3L2Q3SX64 289 aa10.84□□□□□ -0.67
HMGA2-210ENST00000541363 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
HMGA2-210ENST00000541363 NHLRC4P0CG21 123 aaPredicted RBP10.82□□□□□ -0.68
HMGA2-210ENST00000541363 EDN2P20800 178 aa10.82□□□□□ -0.68
HMGA2-210ENST00000541363 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
HMGA2-210ENST00000541363 APLNQ9ULZ1 77 aa10.82□□□□□ -0.68
HMGA2-210ENST00000541363 ABCA2Q9BZC7 2435 aa10.81□□□□□ -0.68
HMGA2-210ENST00000541363 FAM229AH3BQW9 127 aa10.81□□□□□ -0.68
HMGA2-210ENST00000541363 TYMSOSQ8TAI1 123 aa10.8□□□□□ -0.68
HMGA2-210ENST00000541363 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
HMGA2-210ENST00000541363 LINC01600Q96MT4 127 aa10.79□□□□□ -0.68
HMGA2-210ENST00000541363 Q96NJ1 140 aa10.78□□□□□ -0.68
HMGA2-210ENST00000541363 UQCR11O14957 56 aa10.77□□□□□ -0.69
HMGA2-210ENST00000541363 Q8NBF4 154 aa10.77□□□□□ -0.69
HMGA2-210ENST00000541363 CDIP1Q9H305 208 aa10.76□□□□□ -0.69
HMGA2-210ENST00000541363 COL4A3Q01955 1670 aa10.76□□□□□ -0.69
HMGA2-210ENST00000541363 Q6ZSN1 163 aa10.76□□□□□ -0.69
HMGA2-210ENST00000541363 MDFIQ99750 246 aa10.76□□□□□ -0.69
HMGA2-210ENST00000541363 URB1-AS1Q96HZ7 61 aa10.75□□□□□ -0.69
HMGA2-210ENST00000541363 ANKHD1Q8IWZ3 2542 aaKnown RBP10.75□□□□□ -0.69
HMGA2-210ENST00000541363 EPM2AB3EWF7 344 aa10.74□□□□□ -0.69
HMGA2-210ENST00000541363 CYP4F30PQ9H0H9 118 aa10.74□□□□□ -0.69
HMGA2-210ENST00000541363 LOC101927531A0A1B0GV80 90 aa10.74□□□□□ -0.69
HMGA2-210ENST00000541363 CRIP3Q6Q6R5 217 aa10.74□□□□□ -0.69
HMGA2-210ENST00000541363 LINC00167Q96N53 147 aa10.74□□□□□ -0.69
HMGA2-210ENST00000541363 C16orf95Q9H693 158 aa10.74□□□□□ -0.69
HMGA2-210ENST00000541363 GPR179Q6PRD1 2367 aa10.73□□□□□ -0.69
HMGA2-210ENST00000541363 COL4A4P53420 1690 aaPredicted RBP10.73□□□□□ -0.69
HMGA2-210ENST00000541363 LTBP2Q14767 1821 aa10.73□□□□□ -0.69
HMGA2-210ENST00000541363 LINC00476Q8WZB0 136 aa10.72□□□□□ -0.69
HMGA2-210ENST00000541363 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.69
HMGA2-210ENST00000541363 SMR3AQ99954 134 aa10.7□□□□□ -0.7
HMGA2-210ENST00000541363 COX6B2Q6YFQ2 88 aa10.7□□□□□ -0.7
HMGA2-210ENST00000541363 MUC6Q6W4X9 2439 aa10.69□□□□□ -0.7
HMGA2-210ENST00000541363 LOC110117498A0A087WWA1 95 aa10.69□□□□□ -0.7
HMGA2-210ENST00000541363 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
HMGA2-210ENST00000541363 Q6ZQT0 140 aa10.69□□□□□ -0.7
HMGA2-210ENST00000541363 MIR22HGQ0VDD5 57 aa10.69□□□□□ -0.7
HMGA2-210ENST00000541363 LINC00310P59036 64 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms