RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 NDUFA1O15239 70 aa10.69□□□□□ -0.7
CLPTM1-202ENST00000541297 DAD1P61803 113 aa10.68□□□□□ -0.7
CLPTM1-202ENST00000541297 MEIG1Q5JSS6 88 aa10.68□□□□□ -0.7
CLPTM1-202ENST00000541297 LINC00308Q8TCZ7 52 aa10.68□□□□□ -0.7
CLPTM1-202ENST00000541297 NTM-AS1Q6ZSK4 140 aa10.68□□□□□ -0.7
CLPTM1-202ENST00000541297 DAZ4Q86SG3 579 aaKnown RBP10.68□□□□□ -0.7
CLPTM1-202ENST00000541297 Q9H8V8 135 aa10.68□□□□□ -0.7
CLPTM1-202ENST00000541297 DAZ3Q9NR90 486 aaKnown RBP10.68□□□□□ -0.7
CLPTM1-202ENST00000541297 CIRBPQ14011 172 aaKnown RBP10.67□□□□□ -0.7
CLPTM1-202ENST00000541297 TIRAPP58753 221 aa10.67□□□□□ -0.7
CLPTM1-202ENST00000541297 TRBV7-7A0A0K0K1E9 115 aa10.66□□□□□ -0.7
CLPTM1-202ENST00000541297 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
CLPTM1-202ENST00000541297 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
CLPTM1-202ENST00000541297 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.7
CLPTM1-202ENST00000541297 GYPEP15421 78 aa10.65□□□□□ -0.7
CLPTM1-202ENST00000541297 COX7A2LO14548 114 aa10.64□□□□□ -0.71
CLPTM1-202ENST00000541297 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
CLPTM1-202ENST00000541297 HTN3P15516 51 aa10.64□□□□□ -0.71
CLPTM1-202ENST00000541297 SOSTDC1Q6X4U4 206 aa10.64□□□□□ -0.71
CLPTM1-202ENST00000541297 A0A096LPF7 62 aa10.64□□□□□ -0.71
CLPTM1-202ENST00000541297 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
CLPTM1-202ENST00000541297 LINC00242Q5T6M2 205 aa10.64□□□□□ -0.71
CLPTM1-202ENST00000541297 IGLV5-39A0A0G2JS06 123 aa10.63□□□□□ -0.71
CLPTM1-202ENST00000541297 SMCR5Q8TEV8 140 aa10.63□□□□□ -0.71
CLPTM1-202ENST00000541297 FAM236AA0A1B0GUQ0 79 aa10.62□□□□□ -0.71
CLPTM1-202ENST00000541297 FAM236BA0A1B0GV22 79 aa10.62□□□□□ -0.71
CLPTM1-202ENST00000541297 PAX4O43316 350 aa10.62□□□□□ -0.71
CLPTM1-202ENST00000541297 F5H768 121 aa10.62□□□□□ -0.71
CLPTM1-202ENST00000541297 ATP5G1P05496 136 aa10.62□□□□□ -0.71
CLPTM1-202ENST00000541297 HERVK_113P63121 156 aa10.62□□□□□ -0.71
CLPTM1-202ENST00000541297 MRAPQ8TCY5 172 aa10.62□□□□□ -0.71
CLPTM1-202ENST00000541297 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
CLPTM1-202ENST00000541297 K7EIL1 84 aa10.61□□□□□ -0.71
CLPTM1-202ENST00000541297 ACYP1P07311 99 aa10.61□□□□□ -0.71
CLPTM1-202ENST00000541297 SMIM1B2RUZ4 78 aa10.6□□□□□ -0.71
CLPTM1-202ENST00000541297 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
CLPTM1-202ENST00000541297 UBE2L6O14933 153 aa10.59□□□□□ -0.71
CLPTM1-202ENST00000541297 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
CLPTM1-202ENST00000541297 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
CLPTM1-202ENST00000541297 BAALC-AS2P0C853 105 aa10.59□□□□□ -0.71
CLPTM1-202ENST00000541297 FAM218AQ96MZ4 157 aa10.58□□□□□ -0.72
CLPTM1-202ENST00000541297 TRBV6-8A0A0A6YYG3 113 aa10.58□□□□□ -0.72
CLPTM1-202ENST00000541297 A0A0J9YWU9 116 aa10.58□□□□□ -0.72
CLPTM1-202ENST00000541297 IMUPQ9GZP8 106 aa10.58□□□□□ -0.72
CLPTM1-202ENST00000541297 C22orf24Q9Y442 160 aa10.58□□□□□ -0.72
CLPTM1-202ENST00000541297 TRACP01848 142 aa10.57□□□□□ -0.72
CLPTM1-202ENST00000541297 LINC00643Q86TS7 51 aa10.57□□□□□ -0.72
CLPTM1-202ENST00000541297 COPS9Q8WXC6 57 aa10.57□□□□□ -0.72
CLPTM1-202ENST00000541297 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
CLPTM1-202ENST00000541297 Q6ZTC4 211 aa10.55□□□□□ -0.72
CLPTM1-202ENST00000541297 FAM19A3Q7Z5A8 133 aa10.55□□□□□ -0.72
CLPTM1-202ENST00000541297 KPRPQ5T749 579 aaPredicted RBP10.54□□□□□ -0.72
CLPTM1-202ENST00000541297 Q9HAA7 133 aa10.54□□□□□ -0.72
CLPTM1-202ENST00000541297 COL7A1Q02388 2944 aa10.54□□□□□ -0.72
CLPTM1-202ENST00000541297 C11orf68Q9H3H3 251 aaKnown RBP10.54□□□□□ -0.72
CLPTM1-202ENST00000541297 TMEM126AQ9H061 195 aa10.53□□□□□ -0.72
CLPTM1-202ENST00000541297 CDC42SE2Q9NRR3 84 aa10.53□□□□□ -0.72
CLPTM1-202ENST00000541297 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
CLPTM1-202ENST00000541297 SDIM1Q6ZPB5 146 aa10.53□□□□□ -0.72
CLPTM1-202ENST00000541297 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
CLPTM1-202ENST00000541297 GAGE2AQ6NT46 116 aa10.52□□□□□ -0.73
CLPTM1-202ENST00000541297 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
CLPTM1-202ENST00000541297 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
CLPTM1-202ENST00000541297 C5orf47Q569G3 176 aa10.51□□□□□ -0.73
CLPTM1-202ENST00000541297 C9orf153Q5TBE3 101 aa10.5□□□□□ -0.73
CLPTM1-202ENST00000541297 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
CLPTM1-202ENST00000541297 TM2D3Q9BRN9 247 aa10.5□□□□□ -0.73
CLPTM1-202ENST00000541297 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
CLPTM1-202ENST00000541297 MALP21145 153 aa10.49□□□□□ -0.73
CLPTM1-202ENST00000541297 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
CLPTM1-202ENST00000541297 DNHD1Q96M86 4753 aa10.49□□□□□ -0.73
CLPTM1-202ENST00000541297 INAFM2P0DMQ5 153 aa10.49□□□□□ -0.73
CLPTM1-202ENST00000541297 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
CLPTM1-202ENST00000541297 RPL28P46779 137 aaKnown RBP10.48□□□□□ -0.73
CLPTM1-202ENST00000541297 IGKV2-28A0A075B6P5 120 aa10.48□□□□□ -0.73
CLPTM1-202ENST00000541297 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
CLPTM1-202ENST00000541297 IGKV2D-28P01615 120 aa10.48□□□□□ -0.73
CLPTM1-202ENST00000541297 CRPP02741 224 aa10.48□□□□□ -0.73
CLPTM1-202ENST00000541297 Q8N3U1 123 aa10.48□□□□□ -0.73
CLPTM1-202ENST00000541297 MIR7-3HGQ8N6C7 128 aa10.48□□□□□ -0.73
CLPTM1-202ENST00000541297 UQCRQO14949 82 aa10.47□□□□□ -0.73
CLPTM1-202ENST00000541297 CXCL5P42830 114 aa10.47□□□□□ -0.73
CLPTM1-202ENST00000541297 C9orf129Q5T035 196 aaKnown RBP10.47□□□□□ -0.73
CLPTM1-202ENST00000541297 FAM19A5Q7Z5A7 132 aaPredicted RBP10.46□□□□□ -0.73
CLPTM1-202ENST00000541297 SND1-IT1Q9HBX3 110 aa10.46□□□□□ -0.73
CLPTM1-202ENST00000541297 TOMM7Q9P0U1 55 aa10.46□□□□□ -0.73
CLPTM1-202ENST00000541297 A0A087WYN8 130 aa10.46□□□□□ -0.74
CLPTM1-202ENST00000541297 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.74
CLPTM1-202ENST00000541297 DNAH9Q9NYC9 4486 aa10.45□□□□□ -0.74
CLPTM1-202ENST00000541297 DEFB131BA0A096LNP1 70 aa10.45□□□□□ -0.74
CLPTM1-202ENST00000541297 LINC00526Q96FQ7 95 aa10.45□□□□□ -0.74
CLPTM1-202ENST00000541297 SMIM11BQ8TCY0 68 aa10.45□□□□□ -0.74
CLPTM1-202ENST00000541297 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
CLPTM1-202ENST00000541297 DNAL4O96015 105 aa10.43□□□□□ -0.74
CLPTM1-202ENST00000541297 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
CLPTM1-202ENST00000541297 LINC00158P58513 81 aa10.43□□□□□ -0.74
CLPTM1-202ENST00000541297 LYPD5Q6UWN5 251 aa10.42□□□□□ -0.74
CLPTM1-202ENST00000541297 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
CLPTM1-202ENST00000541297 COX7CP15954 63 aa10.42□□□□□ -0.74
CLPTM1-202ENST00000541297 C2orf48Q96LS8 159 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms