RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 TMEM223A0PJW6 202 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 E9PLD3 99 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 M0R2N4 97 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 PSCAO43653 123 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 APOMO95445 188 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 LGALS3P17931 250 aaKnown RBP4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 PLEKHB2Q96CS7 222 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 TM2D2Q9BX73 214 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 PRO1933Q9H354 126 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
CLTCL1-206ENST00000540896 IGHV1-58A0A0C4DH39 117 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 TSTD3H0UI37 97 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 J3QQQ9 107 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 LEPROTO15243 131 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 PRSS2P07478 247 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 FOXI1Q12951 378 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 C6orf226Q5I0X4 101 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 CFAP161Q6P656 301 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 ORAOV1Q8WV07 137 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 C14orf144Q96I85 54 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 COX11Q9Y6N1 276 aa4.44□□□□□ -1.7
CLTCL1-206ENST00000540896 SACSQ9NZJ4 4579 aa4.43□□□□□ -1.7
CLTCL1-206ENST00000540896 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
CLTCL1-206ENST00000540896 SMIM1B2RUZ4 78 aa4.43□□□□□ -1.7
CLTCL1-206ENST00000540896 SLC25A34Q6PIV7 304 aa4.43□□□□□ -1.7
CLTCL1-206ENST00000540896 PCP2Q8IVA1 136 aa4.43□□□□□ -1.7
CLTCL1-206ENST00000540896 LINC01561Q8N1V8 128 aa4.43□□□□□ -1.7
CLTCL1-206ENST00000540896 COX7B2Q8TF08 81 aa4.43□□□□□ -1.7
CLTCL1-206ENST00000540896 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 IGLV5-39A0A0G2JS06 123 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 MYMXA0A1B0GTQ4 84 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 COX8AP10176 69 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 CKS1BP61024 79 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 FAM30AQ9NZY2 134 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 UQCR10Q9UDW1 63 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 NDUFA12Q9UI09 145 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 VPS13DQ5THJ4 4388 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 KMT2AQ03164 3969 aa4.42□□□□□ -1.7
CLTCL1-206ENST00000540896 PCP4L1A6NKN8 68 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 KRTAP26-1Q6PEX3 210 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 SCGB1D4Q6XE38 83 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 Q8IZM0 81 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 MIEN1Q9BRT3 115 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 TTTY13Q9BZ97 58 aa4.41□□□□□ -1.7
CLTCL1-206ENST00000540896 RYR2Q92736 4967 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 USP17L23D6RBM5 183 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 LECT2O14960 151 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 HIGD2BQ4VC39 106 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 SFTA2Q6UW10 78 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 BOD1L2Q8IYS8 172 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 C6orf223Q8N319 242 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 LINC00526Q96FQ7 95 aa4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.71
CLTCL1-206ENST00000540896 B5MCH6 92 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 NDUFA1O15239 70 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 DLEU1O43261 78 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 CXCL5P42830 114 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 HNRNPA3P51991 378 aaKnown RBP4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 HERV-K104P63124 156 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 CIRBPQ14011 172 aaKnown RBP4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 MEIG1Q5JSS6 88 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 C2orf82Q6UX34 121 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 Q6ZR54 194 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 CAMK2N2Q96S95 79 aa4.39□□□□□ -1.71
CLTCL1-206ENST00000540896 HYDINQ4G0P3 5121 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 A0A0J9YXY3 114 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 LINC00587B1AMM8 73 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 SRSF9Q13242 221 aaKnown RBP eCLIP4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 C14orf177Q52M58 125 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 C2orf48Q96LS8 159 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 TP73-AS1Q9UF72 201 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 DNAH6Q9C0G6 4158 aa4.38□□□□□ -1.71
CLTCL1-206ENST00000540896 GVQW2A0A096LPI5 108 aaPredicted RBP4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 A0A0U1RRA0 63 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 TMEM238C9JI98 176 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 DDTP30046 118 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 PFN2P35080 140 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 PTTG1IPP53801 180 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 LINC00158P58513 81 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 SYCNQ0VAF6 134 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 UNQ6190/PRO20217Q6UXQ8 127 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
CLTCL1-206ENST00000540896 F8WDY8 70 aa4.36□□□□□ -1.71
CLTCL1-206ENST00000540896 SMIM13P0DJ93 91 aa4.36□□□□□ -1.71
CLTCL1-206ENST00000540896 CTAG1AP78358 180 aa4.36□□□□□ -1.71
CLTCL1-206ENST00000540896 HIGD1BQ9P298 99 aa4.36□□□□□ -1.71
CLTCL1-206ENST00000540896 DNAH2Q9P225 4427 aa4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 TRBV30A0A0K0K1B3 111 aa4.35□□□□□ -1.71
CLTCL1-206ENST00000540896 C9orf116Q5BN46 136 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms