RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 UNQ6190/PRO20217Q6UXQ8 127 aa6.45□□□□□ -1.38
CDCA3-208ENST00000540683 FA2HQ7L5A8 372 aa6.45□□□□□ -1.38
CDCA3-208ENST00000540683 C6orf48Q9UBA6 75 aa6.45□□□□□ -1.38
CDCA3-208ENST00000540683 A0A1W2PNN7 141 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 F8VRH5 84 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 H3BRM9 83 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 UBE2BP63146 152 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 SRSF9Q13242 221 aaKnown RBP eCLIP6.44□□□□□ -1.38
CDCA3-208ENST00000540683 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 GAGE2EQ4V326 116 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
CDCA3-208ENST00000540683 C1orf137Q5JT78 98 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 TOMM7Q9P0U1 55 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 GAGE2DQ9UEU5 116 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
CDCA3-208ENST00000540683 TINCRA0A1B0GVN0 87 aa6.43□□□□□ -1.38
CDCA3-208ENST00000540683 COMMD7Q86VX2 200 aa6.43□□□□□ -1.38
CDCA3-208ENST00000540683 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
CDCA3-208ENST00000540683 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 M0QXV9 152 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 RAB5BP61020 215 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 FABP9Q0Z7S8 132 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 PDZD11Q5EBL8 140 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 C10orf25Q5T742 122 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 SFTA2Q6UW10 78 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 LINC00173Q6ZV60 143 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 LINC00469Q8N7U9 141 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 RPS10P5Q9NQ39 176 aa6.42□□□□□ -1.38
CDCA3-208ENST00000540683 IGLV7-43P04211 117 aa6.41□□□□□ -1.38
CDCA3-208ENST00000540683 ADCYAP1P18509 176 aa6.41□□□□□ -1.38
CDCA3-208ENST00000540683 PMVKQ15126 192 aa6.41□□□□□ -1.38
CDCA3-208ENST00000540683 KIAA1644Q3SXP7 199 aa6.41□□□□□ -1.38
CDCA3-208ENST00000540683 PHF5AQ7RTV0 110 aaKnown RBP6.41□□□□□ -1.38
CDCA3-208ENST00000540683 FAM19A5Q7Z5A7 132 aaPredicted RBP6.41□□□□□ -1.38
CDCA3-208ENST00000540683 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
CDCA3-208ENST00000540683 CARHSP1Q9Y2V2 147 aaKnown RBP6.41□□□□□ -1.38
CDCA3-208ENST00000540683 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.38
CDCA3-208ENST00000540683 NUPR1O60356 82 aa6.4□□□□□ -1.38
CDCA3-208ENST00000540683 SNAPINO95295 136 aa6.4□□□□□ -1.38
CDCA3-208ENST00000540683 C10orf91Q5T1B1 145 aa6.4□□□□□ -1.38
CDCA3-208ENST00000540683 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
CDCA3-208ENST00000540683 TP73-AS1Q9UF72 201 aa6.4□□□□□ -1.38
CDCA3-208ENST00000540683 C9orf118A6NHY6 69 aa6.39□□□□□ -1.39
CDCA3-208ENST00000540683 SVBPQ8N300 66 aa6.39□□□□□ -1.39
CDCA3-208ENST00000540683 CST9LQ9H4G1 147 aa6.39□□□□□ -1.39
CDCA3-208ENST00000540683 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
CDCA3-208ENST00000540683 H0Y9J4 135 aa6.38□□□□□ -1.39
CDCA3-208ENST00000540683 ATP5LO75964 103 aa6.38□□□□□ -1.39
CDCA3-208ENST00000540683 RPL13AP40429 203 aaKnown RBP6.38□□□□□ -1.39
CDCA3-208ENST00000540683 IFITM2Q01629 132 aa6.38□□□□□ -1.39
CDCA3-208ENST00000540683 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
CDCA3-208ENST00000540683 TRAPPC1Q9Y5R8 145 aa6.38□□□□□ -1.39
CDCA3-208ENST00000540683 IGLV5-45A0A087WSX0 123 aa6.37□□□□□ -1.39
CDCA3-208ENST00000540683 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
CDCA3-208ENST00000540683 FAM168BA1KXE4 195 aa6.36□□□□□ -1.39
CDCA3-208ENST00000540683 SMIM1B2RUZ4 78 aa6.36□□□□□ -1.39
CDCA3-208ENST00000540683 HBDP02042 147 aa6.36□□□□□ -1.39
CDCA3-208ENST00000540683 LINC00614P0C842 121 aa6.36□□□□□ -1.39
CDCA3-208ENST00000540683 RPL28P46779 137 aaKnown RBP6.35□□□□□ -1.39
CDCA3-208ENST00000540683 NDUFA6P56556 154 aa6.35□□□□□ -1.39
CDCA3-208ENST00000540683 COX17Q14061 63 aa6.35□□□□□ -1.39
CDCA3-208ENST00000540683 C9orf129Q5T035 196 aaKnown RBP6.35□□□□□ -1.39
CDCA3-208ENST00000540683 ZC2HC1BQ5TFG8 222 aa6.35□□□□□ -1.39
CDCA3-208ENST00000540683 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
CDCA3-208ENST00000540683 NKAPP1Q8N9T2 125 aa6.35□□□□□ -1.39
CDCA3-208ENST00000540683 HMCN2Q8NDA2 5059 aa6.35□□□□□ -1.39
CDCA3-208ENST00000540683 APOC3P02656 99 aa6.34□□□□□ -1.39
CDCA3-208ENST00000540683 C22orf24Q9Y442 160 aa6.34□□□□□ -1.39
CDCA3-208ENST00000540683 ZNF861PO60384 105 aa6.33□□□□□ -1.4
CDCA3-208ENST00000540683 IGLC3P0DOY3 106 aa6.33□□□□□ -1.4
CDCA3-208ENST00000540683 RPL24P83731 157 aaKnown RBP6.33□□□□□ -1.4
CDCA3-208ENST00000540683 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
CDCA3-208ENST00000540683 SCGB1D1O95968 90 aa6.32□□□□□ -1.4
CDCA3-208ENST00000540683 C18orf32Q8TCD1 76 aa6.32□□□□□ -1.4
CDCA3-208ENST00000540683 CHCHD1Q96BP2 118 aaKnown RBP6.32□□□□□ -1.4
CDCA3-208ENST00000540683 LINC00587B1AMM8 73 aa6.31□□□□□ -1.4
CDCA3-208ENST00000540683 BCE1O60756 84 aa6.31□□□□□ -1.4
CDCA3-208ENST00000540683 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
CDCA3-208ENST00000540683 IGLV5-37A0A075B6J1 123 aa6.3□□□□□ -1.4
CDCA3-208ENST00000540683 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
CDCA3-208ENST00000540683 BAGE3Q86Y29 109 aa6.3□□□□□ -1.4
CDCA3-208ENST00000540683 TMEM170BQ5T4T1 132 aa6.29□□□□□ -1.4
CDCA3-208ENST00000540683 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
CDCA3-208ENST00000540683 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
CDCA3-208ENST00000540683 ZNF22P17026 224 aaPredicted RBP6.28□□□□□ -1.4
CDCA3-208ENST00000540683 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
CDCA3-208ENST00000540683 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
CDCA3-208ENST00000540683 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
CDCA3-208ENST00000540683 HSBP1O75506 76 aa6.27□□□□□ -1.41
CDCA3-208ENST00000540683 PFN2P35080 140 aa6.27□□□□□ -1.41
CDCA3-208ENST00000540683 UBE2AP49459 152 aa6.27□□□□□ -1.41
CDCA3-208ENST00000540683 S100A12P80511 92 aa6.27□□□□□ -1.41
CDCA3-208ENST00000540683 PRR26Q8N8Z3 221 aa6.27□□□□□ -1.41
CDCA3-208ENST00000540683 LINC00167Q96N53 147 aa6.27□□□□□ -1.41
CDCA3-208ENST00000540683 CRYGAP11844 174 aa6.26□□□□□ -1.41
CDCA3-208ENST00000540683 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
CDCA3-208ENST00000540683 TNXBP22105 4242 aa6.25□□□□□ -1.41
CDCA3-208ENST00000540683 A0A096LNJ9 63 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms