RNA–Protein interactions for RNA: ENST00000539804.1

PITX3-202, Transcript of paired like homeodomain 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PITX3, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITX3-202ENST00000539804 IGLV5-45A0A087WSX0 123 aa15.19■□□□□ 0.02
PITX3-202ENST00000539804 C9orf116Q5BN46 136 aaPredicted RBP15.19■□□□□ 0.02
PITX3-202ENST00000539804 CHCHD1Q96BP2 118 aaKnown RBP15.19■□□□□ 0.02
PITX3-202ENST00000539804 PRR3P79522 188 aaKnown RBP15.18■□□□□ 0.02
PITX3-202ENST00000539804 YPEL4Q96NS1 127 aa15.18■□□□□ 0.02
PITX3-202ENST00000539804 DMBT1Q9UGM3 2413 aaPredicted RBP15.17■□□□□ 0.02
PITX3-202ENST00000539804 F8VRH5 84 aa15.17■□□□□ 0.02
PITX3-202ENST00000539804 C2orf82Q6UX34 121 aa15.16■□□□□ 0.02
PITX3-202ENST00000539804 NDUFA6P56556 154 aa15.15■□□□□ 0.02
PITX3-202ENST00000539804 GAGE2EQ4V326 116 aa15.15■□□□□ 0.02
PITX3-202ENST00000539804 GAGE2DQ9UEU5 116 aa15.15■□□□□ 0.02
PITX3-202ENST00000539804 MYCBP2O75592 4640 aa15.14■□□□□ 0.01
PITX3-202ENST00000539804 A0A1W2PNN7 141 aa15.14■□□□□ 0.01
PITX3-202ENST00000539804 SMIM1B2RUZ4 78 aa15.13■□□□□ 0.01
PITX3-202ENST00000539804 IGLC3P0DOY3 106 aa15.13■□□□□ 0.01
PITX3-202ENST00000539804 COX7B2Q8TF08 81 aa15.13■□□□□ 0.01
PITX3-202ENST00000539804 URB1-AS1Q96HZ7 61 aa15.13■□□□□ 0.01
PITX3-202ENST00000539804 CBLN2Q8IUK8 224 aa15.12■□□□□ 0.01
PITX3-202ENST00000539804 A0A096LNJ9 63 aa15.11■□□□□ 0.01
PITX3-202ENST00000539804 SPINK6Q6UWN8 80 aa15.1■□□□□ 0.01
PITX3-202ENST00000539804 HNRNPA3P51991 378 aaKnown RBP15.09■□□□□ 0.01
PITX3-202ENST00000539804 BAGE3Q86Y29 109 aa15.09■□□□□ 0.01
PITX3-202ENST00000539804 SLC7A5P1Q8MH63 180 aa15.09■□□□□ 0.01
PITX3-202ENST00000539804 ODF1Q14990 250 aa15.08■□□□□ 0
PITX3-202ENST00000539804 SFTA2Q6UW10 78 aa15.08■□□□□ 0
PITX3-202ENST00000539804 HSBP1O75506 76 aa15.07■□□□□ 0
PITX3-202ENST00000539804 PMCHL1Q16048 86 aa15.07■□□□□ 0
PITX3-202ENST00000539804 SPINK8P0C7L1 97 aa15.06■□□□□ 0
PITX3-202ENST00000539804 REG3GQ6UW15 175 aa15.06■□□□□ 0
PITX3-202ENST00000539804 FAM19A5Q7Z5A7 132 aaPredicted RBP15.05■□□□□ -0
PITX3-202ENST00000539804 PHF5AQ7RTV0 110 aaKnown RBP15.04■□□□□ -0
PITX3-202ENST00000539804 TRAV12-1A0A0B4J245 112 aa15.03■□□□□ -0
PITX3-202ENST00000539804 M0QXV9 152 aa15.03■□□□□ -0
PITX3-202ENST00000539804 TRGC2P03986 189 aa15.03■□□□□ -0
PITX3-202ENST00000539804 IFI27L1Q96BM0 104 aa15.03■□□□□ -0
PITX3-202ENST00000539804 LBHQ53QV2 105 aaPredicted RBP15.02■□□□□ -0
PITX3-202ENST00000539804 PSORS1C2Q9UIG4 136 aa15.02■□□□□ -0
PITX3-202ENST00000539804 CHTOPQ9Y3Y2 248 aaKnown RBP15.02■□□□□ -0
PITX3-202ENST00000539804 ZNF22P17026 224 aaPredicted RBP15.01□□□□□ -0.01
PITX3-202ENST00000539804 UBE2BP63146 152 aa15.01□□□□□ -0.01
PITX3-202ENST00000539804 IGLV5-39A0A0G2JS06 123 aa15□□□□□ -0.01
PITX3-202ENST00000539804 FAM168BA1KXE4 195 aa15□□□□□ -0.01
PITX3-202ENST00000539804 C1orf137Q5JT78 98 aa15□□□□□ -0.01
PITX3-202ENST00000539804 C9orf129Q5T035 196 aaKnown RBP15□□□□□ -0.01
PITX3-202ENST00000539804 TMEM170BQ5T4T1 132 aa15□□□□□ -0.01
PITX3-202ENST00000539804 SERTAD4-AS1Q5TG53 156 aa15□□□□□ -0.01
PITX3-202ENST00000539804 SRSF9Q13242 221 aaKnown RBP eCLIP14.97□□□□□ -0.01
PITX3-202ENST00000539804 TP73-AS1Q9UF72 201 aa14.97□□□□□ -0.01
PITX3-202ENST00000539804 COX17Q14061 63 aa14.96□□□□□ -0.01
PITX3-202ENST00000539804 PKHD1L1Q86WI1 4243 aa14.95□□□□□ -0.02
PITX3-202ENST00000539804 C11orf86A6NJI1 115 aa14.95□□□□□ -0.02
PITX3-202ENST00000539804 XAGE1AQ9HD64 81 aa14.95□□□□□ -0.02
PITX3-202ENST00000539804 COLCA2A8K830 154 aa14.94□□□□□ -0.02
PITX3-202ENST00000539804 LEPROTL1O95214 131 aa14.94□□□□□ -0.02
PITX3-202ENST00000539804 HSPB8Q9UJY1 196 aa14.94□□□□□ -0.02
PITX3-202ENST00000539804 LINC01600Q96MT4 127 aa14.93□□□□□ -0.02
PITX3-202ENST00000539804 PLA2G2DQ9UNK4 145 aa14.93□□□□□ -0.02
PITX3-202ENST00000539804 NUPR1O60356 82 aa14.92□□□□□ -0.02
PITX3-202ENST00000539804 DIRC1Q969H9 104 aa14.92□□□□□ -0.02
PITX3-202ENST00000539804 C22orf24Q9Y442 160 aa14.92□□□□□ -0.02
PITX3-202ENST00000539804 IGLV7-43P04211 117 aa14.91□□□□□ -0.02
PITX3-202ENST00000539804 FAM19A2Q8N3H0 131 aa14.91□□□□□ -0.02
PITX3-202ENST00000539804 HERC1Q15751 4861 aa14.91□□□□□ -0.02
PITX3-202ENST00000539804 SERF1AO75920 110 aa14.9□□□□□ -0.02
PITX3-202ENST00000539804 MRPL55Q7Z7F7 128 aaKnown RBP14.89□□□□□ -0.03
PITX3-202ENST00000539804 KRTAP7-1Q8IUC3 87 aa14.89□□□□□ -0.03
PITX3-202ENST00000539804 ERG28Q9UKR5 140 aa14.89□□□□□ -0.03
PITX3-202ENST00000539804 TMEM223A0PJW6 202 aa14.87□□□□□ -0.03
PITX3-202ENST00000539804 NKAPP1Q8N9T2 125 aa14.87□□□□□ -0.03
PITX3-202ENST00000539804 LRP1Q07954 4544 aaKnown RBP14.87□□□□□ -0.03
PITX3-202ENST00000539804 LINC00587B1AMM8 73 aa14.86□□□□□ -0.03
PITX3-202ENST00000539804 PLNP26678 52 aa14.86□□□□□ -0.03
PITX3-202ENST00000539804 PFN2P35080 140 aa14.86□□□□□ -0.03
PITX3-202ENST00000539804 FAT3Q8TDW7 4589 aa14.86□□□□□ -0.03
PITX3-202ENST00000539804 IGLV5-37A0A075B6J1 123 aa14.84□□□□□ -0.03
PITX3-202ENST00000539804 RPL24P83731 157 aaKnown RBP14.84□□□□□ -0.03
PITX3-202ENST00000539804 MT1HL1P0DM35 61 aa14.83□□□□□ -0.04
PITX3-202ENST00000539804 H0Y8G0 127 aa14.82□□□□□ -0.04
PITX3-202ENST00000539804 HERV-K104P63124 156 aa14.82□□□□□ -0.04
PITX3-202ENST00000539804 ZNF625Q96I27 306 aaPredicted RBP14.82□□□□□ -0.04
PITX3-202ENST00000539804 MAP1LC3CQ9BXW4 147 aa14.81□□□□□ -0.04
PITX3-202ENST00000539804 H0Y9J4 135 aa14.8□□□□□ -0.04
PITX3-202ENST00000539804 ATP6V1G1O75348 118 aa14.8□□□□□ -0.04
PITX3-202ENST00000539804 HERVK_113P61574 105 aa14.8□□□□□ -0.04
PITX3-202ENST00000539804 LINC00310P59036 64 aa14.79□□□□□ -0.04
PITX3-202ENST00000539804 KRTAP11-1Q8IUC1 163 aa14.78□□□□□ -0.04
PITX3-202ENST00000539804 SND1-IT1Q9HBX3 110 aa14.78□□□□□ -0.04
PITX3-202ENST00000539804 MYMXA0A1B0GTQ4 84 aa14.77□□□□□ -0.05
PITX3-202ENST00000539804 ZNF861PO60384 105 aa14.77□□□□□ -0.05
PITX3-202ENST00000539804 DPM2O94777 84 aa14.77□□□□□ -0.05
PITX3-202ENST00000539804 FABP4P15090 132 aa14.77□□□□□ -0.05
PITX3-202ENST00000539804 LINC00158P58513 81 aa14.77□□□□□ -0.05
PITX3-202ENST00000539804 LINC00167Q96N53 147 aa14.77□□□□□ -0.05
PITX3-202ENST00000539804 RPL28P46779 137 aaKnown RBP14.76□□□□□ -0.05
PITX3-202ENST00000539804 PLEKHB2Q96CS7 222 aa14.76□□□□□ -0.05
PITX3-202ENST00000539804 BCE1O60756 84 aa14.75□□□□□ -0.05
PITX3-202ENST00000539804 MEIG1Q5JSS6 88 aa14.74□□□□□ -0.05
PITX3-202ENST00000539804 HIST1H2BKO60814 126 aa14.73□□□□□ -0.05
PITX3-202ENST00000539804 IGKCP01834 107 aa14.73□□□□□ -0.05
PITX3-202ENST00000539804 HIST1H2BJP06899 126 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms