RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 ZNF861PO60384 105 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 HBBP68871 147 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 CTAG1AP78358 180 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 MRPS36P82909 103 aaKnown RBP3.16□□□□□ -1.9
SNHG1-207ENST00000537965 RNASE13Q5GAN3 156 aaKnown RBP3.16□□□□□ -1.9
SNHG1-207ENST00000537965 UNQ6190/PRO20217Q6UXQ8 127 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 C20orf78Q9BR46 151 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 SMDT1Q9H4I9 107 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 LPAP08519 4548 aa3.15□□□□□ -1.9
SNHG1-207ENST00000537965 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 TSPAN13O95857 204 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 CRYGAP11844 174 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 RPL28P46779 137 aaKnown RBP3.15□□□□□ -1.91
SNHG1-207ENST00000537965 RPL32P62910 135 aaKnown RBP3.15□□□□□ -1.91
SNHG1-207ENST00000537965 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 Q6ZUT4 128 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 SLC51BQ86UW2 128 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 AMN1Q8IY45 258 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 TYMSOSQ8TAI1 123 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 OSTCQ9NRP0 149 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 C6orf48Q9UBA6 75 aa3.15□□□□□ -1.91
SNHG1-207ENST00000537965 TRBV24-1A0A075B6N3 115 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 A0A1B0GW15 77 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 S100A8P05109 93 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 CKS2P33552 79 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 IFI27P40305 119 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-207ENST00000537965 FAM104BQ5XKR9 115 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 LINC01561Q8N1V8 128 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 SMIM7Q9BQ49 75 aa3.14□□□□□ -1.91
SNHG1-207ENST00000537965 F8W036 122 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 PPBPP02775 128 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 RAB5AP20339 215 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 CEBPGP53567 150 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 CKS1BP61024 79 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 RPL39P62891 51 aaKnown RBP3.13□□□□□ -1.91
SNHG1-207ENST00000537965 LITAFQ99732 161 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 TP73-AS1Q9UF72 201 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 NAT8BQ9UHF3 227 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 PYGO1Q9Y3Y4 419 aa3.13□□□□□ -1.91
SNHG1-207ENST00000537965 ZNF727A8MUV8 499 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 SEC11AP67812 179 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 KIAA0087Q14695 138 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 TPRXLQ17RH7 258 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 MRPL51Q4U2R6 128 aaKnown RBP3.12□□□□□ -1.91
SNHG1-207ENST00000537965 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 Q6ZN92 141 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 TEX43Q6ZNM6 134 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 LINC01551Q86U37 167 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 TMEM141Q96I45 108 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 C2orf88Q9BSF0 95 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 ALKBH7Q9BT30 221 aaPredicted RBP3.12□□□□□ -1.91
SNHG1-207ENST00000537965 SMIM2Q9BVW6 85 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 EIF5A2Q9GZV4 153 aaKnown RBP3.12□□□□□ -1.91
SNHG1-207ENST00000537965 C22orf24Q9Y442 160 aa3.12□□□□□ -1.91
SNHG1-207ENST00000537965 IGLV9-49A0A0B4J1Y8 123 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 BCE1O60756 84 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 FAM229BQ4G0N7 80 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 FAM74A3Q4VXF1 159 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 C9orf129Q5T035 196 aaKnown RBP3.11□□□□□ -1.91
SNHG1-207ENST00000537965 LINC00242Q5T6M2 205 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 C2orf82Q6UX34 121 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 LINC00173Q6ZV60 143 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 MRPL55Q7Z7F7 128 aaKnown RBP3.11□□□□□ -1.91
SNHG1-207ENST00000537965 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 V9GYV3 84 aa3.11□□□□□ -1.91
SNHG1-207ENST00000537965 IGLV7-46A0A075B6I9 117 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 A0A087X002 238 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 IGKV2D-26A0A0A0MRZ7 120 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 SMIM27A0A1W2PRY6 76 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 SMIM1B2RUZ4 78 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 D6R8Y8 96 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 G0S2P27469 103 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 CXCL5P42830 114 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 UBE2AP49459 152 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 Q8IZM0 81 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 LINC00304Q8N9R0 145 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 FAM104AQ969W3 186 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 VCX2Q9H322 139 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 TOMM7Q9P0U1 55 aa3.1□□□□□ -1.91
SNHG1-207ENST00000537965 IGLV4-3A0A075B6K6 122 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 F8VRH5 84 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 TCTE3Q8IZS6 198 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 ORMDL3Q8N138 153 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 LINC00469Q8N7U9 141 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 XAGE1AQ9HD64 81 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 CYSLTR1Q9Y271 337 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 LAMTOR2Q9Y2Q5 125 aa3.09□□□□□ -1.91
SNHG1-207ENST00000537965 MUC2Q02817 5179 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 K7EMI3 77 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 ATP6V1G1O75348 118 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 NPYP01303 97 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 HERVK_113P63121 156 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 SPAG11AQ6PDA7 123 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 ALKAL2Q6UX46 152 aa3.08□□□□□ -1.92
SNHG1-207ENST00000537965 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms