RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
NXF1-210ENST00000531579 H3BRM9 83 aa9.41□□□□□ -0.9
NXF1-210ENST00000531579 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
NXF1-210ENST00000531579 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
NXF1-210ENST00000531579 SRRM2Q9UQ35 2752 aaKnown RBP9.4□□□□□ -0.9
NXF1-210ENST00000531579 HSBP1O75506 76 aa9.4□□□□□ -0.9
NXF1-210ENST00000531579 CXCL5P42830 114 aa9.4□□□□□ -0.9
NXF1-210ENST00000531579 C2orf82Q6UX34 121 aa9.4□□□□□ -0.9
NXF1-210ENST00000531579 IGLC3P0DOY3 106 aa9.39□□□□□ -0.91
NXF1-210ENST00000531579 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
NXF1-210ENST00000531579 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
NXF1-210ENST00000531579 F8VRH5 84 aa9.38□□□□□ -0.91
NXF1-210ENST00000531579 Q6ZRP5 223 aa9.38□□□□□ -0.91
NXF1-210ENST00000531579 VPS13BQ7Z7G8 4022 aa9.38□□□□□ -0.91
NXF1-210ENST00000531579 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
NXF1-210ENST00000531579 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
NXF1-210ENST00000531579 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
NXF1-210ENST00000531579 A0A1W2PNN7 141 aa9.36□□□□□ -0.91
NXF1-210ENST00000531579 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
NXF1-210ENST00000531579 GAGE2EQ4V326 116 aa9.35□□□□□ -0.91
NXF1-210ENST00000531579 GAGE2DQ9UEU5 116 aa9.35□□□□□ -0.91
NXF1-210ENST00000531579 CHTOPQ9Y3Y2 248 aaKnown RBP9.35□□□□□ -0.91
NXF1-210ENST00000531579 SPINK8P0C7L1 97 aa9.34□□□□□ -0.91
NXF1-210ENST00000531579 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
NXF1-210ENST00000531579 SERF1AO75920 110 aa9.33□□□□□ -0.92
NXF1-210ENST00000531579 ZNF22P17026 224 aaPredicted RBP9.33□□□□□ -0.92
NXF1-210ENST00000531579 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
NXF1-210ENST00000531579 LEPROTL1O95214 131 aa9.32□□□□□ -0.92
NXF1-210ENST00000531579 TMEM170BQ5T4T1 132 aa9.32□□□□□ -0.92
NXF1-210ENST00000531579 C11orf86A6NJI1 115 aa9.31□□□□□ -0.92
NXF1-210ENST00000531579 KRTAP29-1A8MX34 341 aaPredicted RBP9.31□□□□□ -0.92
NXF1-210ENST00000531579 SCO1O75880 301 aa9.31□□□□□ -0.92
NXF1-210ENST00000531579 SFTA2Q6UW10 78 aa9.31□□□□□ -0.92
NXF1-210ENST00000531579 HSPB8Q9UJY1 196 aa9.31□□□□□ -0.92
NXF1-210ENST00000531579 OXTP01178 125 aa9.29□□□□□ -0.92
NXF1-210ENST00000531579 LINC00310P59036 64 aa9.29□□□□□ -0.92
NXF1-210ENST00000531579 PRR3P79522 188 aaKnown RBP9.29□□□□□ -0.92
NXF1-210ENST00000531579 NUPR1O60356 82 aa9.28□□□□□ -0.92
NXF1-210ENST00000531579 ODF1Q14990 250 aa9.28□□□□□ -0.92
NXF1-210ENST00000531579 C9orf129Q5T035 196 aaKnown RBP9.28□□□□□ -0.92
NXF1-210ENST00000531579 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
NXF1-210ENST00000531579 J3QL48 77 aa9.27□□□□□ -0.93
NXF1-210ENST00000531579 HNRNPA3P51991 378 aaKnown RBP9.27□□□□□ -0.93
NXF1-210ENST00000531579 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
NXF1-210ENST00000531579 TMEM223A0PJW6 202 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BKO60814 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BJP06899 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BOP23527 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BBP33778 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BDP58876 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BCP62807 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 COX17Q14061 63 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST2H2BEQ16778 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.26□□□□□ -0.93
NXF1-210ENST00000531579 FAM19A5Q7Z5A7 132 aaPredicted RBP9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BHQ93079 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BNQ99877 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 HIST1H2BMQ99879 126 aa9.26□□□□□ -0.93
NXF1-210ENST00000531579 FABP4P15090 132 aa9.25□□□□□ -0.93
NXF1-210ENST00000531579 S100A1P23297 94 aa9.25□□□□□ -0.93
NXF1-210ENST00000531579 SPINK6Q6UWN8 80 aa9.25□□□□□ -0.93
NXF1-210ENST00000531579 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
NXF1-210ENST00000531579 LBHQ53QV2 105 aaPredicted RBP9.24□□□□□ -0.93
NXF1-210ENST00000531579 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
NXF1-210ENST00000531579 MAP1LC3CQ9BXW4 147 aa9.24□□□□□ -0.93
NXF1-210ENST00000531579 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
NXF1-210ENST00000531579 FLG2Q5D862 2391 aaPredicted RBP9.23□□□□□ -0.93
NXF1-210ENST00000531579 H0Y8G0 127 aa9.23□□□□□ -0.93
NXF1-210ENST00000531579 M0QXV9 152 aa9.23□□□□□ -0.93
NXF1-210ENST00000531579 PLNP26678 52 aa9.23□□□□□ -0.93
NXF1-210ENST00000531579 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
NXF1-210ENST00000531579 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
NXF1-210ENST00000531579 PFN2P35080 140 aa9.22□□□□□ -0.93
NXF1-210ENST00000531579 UBE2BP63146 152 aa9.22□□□□□ -0.93
NXF1-210ENST00000531579 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
NXF1-210ENST00000531579 ERG28Q9UKR5 140 aa9.22□□□□□ -0.93
NXF1-210ENST00000531579 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
NXF1-210ENST00000531579 C1orf137Q5JT78 98 aa9.21□□□□□ -0.94
NXF1-210ENST00000531579 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
NXF1-210ENST00000531579 MYCBP2O75592 4640 aa9.2□□□□□ -0.94
NXF1-210ENST00000531579 LINC00587B1AMM8 73 aa9.2□□□□□ -0.94
NXF1-210ENST00000531579 DPM2O94777 84 aa9.2□□□□□ -0.94
NXF1-210ENST00000531579 SERTAD4-AS1Q5TG53 156 aa9.2□□□□□ -0.94
NXF1-210ENST00000531579 HERV-K104P63124 156 aa9.19□□□□□ -0.94
NXF1-210ENST00000531579 COA6Q5JTJ3 125 aaKnown RBP9.19□□□□□ -0.94
NXF1-210ENST00000531579 IGKCP01834 107 aa9.18□□□□□ -0.94
NXF1-210ENST00000531579 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
NXF1-210ENST00000531579 MRPL55Q7Z7F7 128 aaKnown RBP9.18□□□□□ -0.94
NXF1-210ENST00000531579 IGLV7-43P04211 117 aa9.17□□□□□ -0.94
NXF1-210ENST00000531579 HERVK_113P61574 105 aa9.17□□□□□ -0.94
NXF1-210ENST00000531579 PLEKHB2Q96CS7 222 aa9.17□□□□□ -0.94
NXF1-210ENST00000531579 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
NXF1-210ENST00000531579 MYMXA0A1B0GTQ4 84 aa9.16□□□□□ -0.94
NXF1-210ENST00000531579 LEPROTO15243 131 aa9.16□□□□□ -0.94
NXF1-210ENST00000531579 LINC00158P58513 81 aa9.16□□□□□ -0.94
NXF1-210ENST00000531579 RPL24P83731 157 aaKnown RBP9.16□□□□□ -0.94
NXF1-210ENST00000531579 KRTAP11-1Q8IUC1 163 aa9.16□□□□□ -0.94
NXF1-210ENST00000531579 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
NXF1-210ENST00000531579 SYS1-DBNDD2H3BUS1 97 aa9.15□□□□□ -0.94
NXF1-210ENST00000531579 ATP6V1G1O75348 118 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms