RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 C6orf48Q9UBA6 75 aa11.98□□□□□ -0.49
PTP4A2-212ENST00000529477 TLX1NBP0CAT3 122 aa11.97□□□□□ -0.49
PTP4A2-212ENST00000529477 C2orf82Q6UX34 121 aa11.97□□□□□ -0.49
PTP4A2-212ENST00000529477 YPEL4Q96NS1 127 aa11.97□□□□□ -0.49
PTP4A2-212ENST00000529477 NDUFA6P56556 154 aa11.96□□□□□ -0.49
PTP4A2-212ENST00000529477 C9orf116Q5BN46 136 aaPredicted RBP11.96□□□□□ -0.49
PTP4A2-212ENST00000529477 CBLN2Q8IUK8 224 aa11.96□□□□□ -0.49
PTP4A2-212ENST00000529477 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.49
PTP4A2-212ENST00000529477 ATP5LO75964 103 aa11.94□□□□□ -0.5
PTP4A2-212ENST00000529477 OXTP01178 125 aa11.94□□□□□ -0.5
PTP4A2-212ENST00000529477 GAGE2EQ4V326 116 aa11.94□□□□□ -0.5
PTP4A2-212ENST00000529477 Q6ZRP5 223 aa11.94□□□□□ -0.5
PTP4A2-212ENST00000529477 URB1-AS1Q96HZ7 61 aa11.94□□□□□ -0.5
PTP4A2-212ENST00000529477 GAGE2DQ9UEU5 116 aa11.94□□□□□ -0.5
PTP4A2-212ENST00000529477 A0A1W2PNN7 141 aa11.93□□□□□ -0.5
PTP4A2-212ENST00000529477 NDUFC2-KCTD14E9PQ53 114 aa11.93□□□□□ -0.5
PTP4A2-212ENST00000529477 H3BRM9 83 aa11.93□□□□□ -0.5
PTP4A2-212ENST00000529477 CXCL5P42830 114 aa11.93□□□□□ -0.5
PTP4A2-212ENST00000529477 PMCHL1Q16048 86 aa11.93□□□□□ -0.5
PTP4A2-212ENST00000529477 PDZD11Q5EBL8 140 aa11.93□□□□□ -0.5
PTP4A2-212ENST00000529477 IGLV5-45A0A087WSX0 123 aa11.92□□□□□ -0.5
PTP4A2-212ENST00000529477 A0A096LNJ9 63 aa11.92□□□□□ -0.5
PTP4A2-212ENST00000529477 HNRNPA3P51991 378 aaKnown RBP11.92□□□□□ -0.5
PTP4A2-212ENST00000529477 PRR3P79522 188 aaKnown RBP11.92□□□□□ -0.5
PTP4A2-212ENST00000529477 SMIM1B2RUZ4 78 aa11.91□□□□□ -0.5
PTP4A2-212ENST00000529477 F8VRH5 84 aa11.91□□□□□ -0.5
PTP4A2-212ENST00000529477 CHCHD1Q96BP2 118 aaKnown RBP11.91□□□□□ -0.5
PTP4A2-212ENST00000529477 PLA2G2DQ9UNK4 145 aa11.91□□□□□ -0.5
PTP4A2-212ENST00000529477 COX7B2Q8TF08 81 aa11.89□□□□□ -0.51
PTP4A2-212ENST00000529477 SPINK8P0C7L1 97 aa11.88□□□□□ -0.51
PTP4A2-212ENST00000529477 IGLC3P0DOY3 106 aa11.88□□□□□ -0.51
PTP4A2-212ENST00000529477 BAGE3Q86Y29 109 aa11.88□□□□□ -0.51
PTP4A2-212ENST00000529477 FAM19A5Q7Z5A7 132 aaPredicted RBP11.87□□□□□ -0.51
PTP4A2-212ENST00000529477 PKHD1L1Q86WI1 4243 aa11.87□□□□□ -0.51
PTP4A2-212ENST00000529477 HSBP1O75506 76 aa11.86□□□□□ -0.51
PTP4A2-212ENST00000529477 TRGC2P03986 189 aa11.86□□□□□ -0.51
PTP4A2-212ENST00000529477 PHF5AQ7RTV0 110 aaKnown RBP11.86□□□□□ -0.51
PTP4A2-212ENST00000529477 FAM168BA1KXE4 195 aa11.84□□□□□ -0.51
PTP4A2-212ENST00000529477 RNF213Q63HN8 5207 aa11.84□□□□□ -0.51
PTP4A2-212ENST00000529477 M0QXV9 152 aa11.82□□□□□ -0.52
PTP4A2-212ENST00000529477 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
PTP4A2-212ENST00000529477 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
PTP4A2-212ENST00000529477 IFI27L1Q96BM0 104 aa11.82□□□□□ -0.52
PTP4A2-212ENST00000529477 CHTOPQ9Y3Y2 248 aaKnown RBP11.82□□□□□ -0.52
PTP4A2-212ENST00000529477 C9orf129Q5T035 196 aaKnown RBP11.81□□□□□ -0.52
PTP4A2-212ENST00000529477 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
PTP4A2-212ENST00000529477 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
PTP4A2-212ENST00000529477 UBE2BP63146 152 aa11.8□□□□□ -0.52
PTP4A2-212ENST00000529477 XAGE1AQ9HD64 81 aa11.8□□□□□ -0.52
PTP4A2-212ENST00000529477 TRAV12-1A0A0B4J245 112 aa11.79□□□□□ -0.52
PTP4A2-212ENST00000529477 IGLV5-39A0A0G2JS06 123 aa11.79□□□□□ -0.52
PTP4A2-212ENST00000529477 C11orf86A6NJI1 115 aa11.79□□□□□ -0.52
PTP4A2-212ENST00000529477 C1orf137Q5JT78 98 aa11.79□□□□□ -0.52
PTP4A2-212ENST00000529477 FAM19A2Q8N3H0 131 aa11.79□□□□□ -0.52
PTP4A2-212ENST00000529477 REG3GQ6UW15 175 aa11.78□□□□□ -0.52
PTP4A2-212ENST00000529477 COLCA2A8K830 154 aa11.77□□□□□ -0.53
PTP4A2-212ENST00000529477 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
PTP4A2-212ENST00000529477 SERF1AO75920 110 aa11.76□□□□□ -0.53
PTP4A2-212ENST00000529477 LRP2P98164 4655 aa11.75□□□□□ -0.53
PTP4A2-212ENST00000529477 LEPROTL1O95214 131 aa11.75□□□□□ -0.53
PTP4A2-212ENST00000529477 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
PTP4A2-212ENST00000529477 SRSF9Q13242 221 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTP4A2-212ENST00000529477 KRTAP7-1Q8IUC3 87 aa11.74□□□□□ -0.53
PTP4A2-212ENST00000529477 HSPB8Q9UJY1 196 aa11.73□□□□□ -0.53
PTP4A2-212ENST00000529477 C22orf24Q9Y442 160 aa11.73□□□□□ -0.53
PTP4A2-212ENST00000529477 H0Y8G0 127 aa11.72□□□□□ -0.53
PTP4A2-212ENST00000529477 PFN2P35080 140 aa11.72□□□□□ -0.53
PTP4A2-212ENST00000529477 IGLV7-43P04211 117 aa11.71□□□□□ -0.53
PTP4A2-212ENST00000529477 COX17Q14061 63 aa11.71□□□□□ -0.53
PTP4A2-212ENST00000529477 ODF1Q14990 250 aa11.71□□□□□ -0.53
PTP4A2-212ENST00000529477 TP73-AS1Q9UF72 201 aa11.71□□□□□ -0.53
PTP4A2-212ENST00000529477 ERG28Q9UKR5 140 aa11.71□□□□□ -0.53
PTP4A2-212ENST00000529477 MRPL55Q7Z7F7 128 aaKnown RBP11.7□□□□□ -0.54
PTP4A2-212ENST00000529477 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
PTP4A2-212ENST00000529477 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
PTP4A2-212ENST00000529477 DIRC1Q969H9 104 aa11.69□□□□□ -0.54
PTP4A2-212ENST00000529477 SCO1O75880 301 aa11.68□□□□□ -0.54
PTP4A2-212ENST00000529477 FABP4P15090 132 aa11.68□□□□□ -0.54
PTP4A2-212ENST00000529477 LINC00310P59036 64 aa11.68□□□□□ -0.54
PTP4A2-212ENST00000529477 KRTAP11-1Q8IUC1 163 aa11.68□□□□□ -0.54
PTP4A2-212ENST00000529477 NKAPP1Q8N9T2 125 aa11.68□□□□□ -0.54
PTP4A2-212ENST00000529477 ZNF625Q96I27 306 aaPredicted RBP11.68□□□□□ -0.54
PTP4A2-212ENST00000529477 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
PTP4A2-212ENST00000529477 NUPR1O60356 82 aa11.66□□□□□ -0.54
PTP4A2-212ENST00000529477 PLNP26678 52 aa11.65□□□□□ -0.54
PTP4A2-212ENST00000529477 TNXBP22105 4242 aa11.65□□□□□ -0.54
PTP4A2-212ENST00000529477 LCE2DQ5TA82 110 aaPredicted RBP11.64□□□□□ -0.55
PTP4A2-212ENST00000529477 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
PTP4A2-212ENST00000529477 IGLV5-37A0A075B6J1 123 aa11.63□□□□□ -0.55
PTP4A2-212ENST00000529477 ATP6V1G1O75348 118 aa11.63□□□□□ -0.55
PTP4A2-212ENST00000529477 LINC00158P58513 81 aa11.63□□□□□ -0.55
PTP4A2-212ENST00000529477 RPL24P83731 157 aaKnown RBP11.63□□□□□ -0.55
PTP4A2-212ENST00000529477 MAP1LC3CQ9BXW4 147 aa11.63□□□□□ -0.55
PTP4A2-212ENST00000529477 H0Y9J4 135 aa11.62□□□□□ -0.55
PTP4A2-212ENST00000529477 DPM2O94777 84 aa11.62□□□□□ -0.55
PTP4A2-212ENST00000529477 LINC00167Q96N53 147 aa11.62□□□□□ -0.55
PTP4A2-212ENST00000529477 GAGE10A6NGK3 116 aa11.61□□□□□ -0.55
PTP4A2-212ENST00000529477 HIST1H2BKO60814 126 aa11.61□□□□□ -0.55
PTP4A2-212ENST00000529477 HIST1H2BJP06899 126 aa11.61□□□□□ -0.55
PTP4A2-212ENST00000529477 HIST1H2BOP23527 126 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms