RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 LINC00482Q8N8I6 264 aa13.08□□□□□ -0.32
TM9SF1-206ENST00000528669 SPATA3Q8NHX4 192 aa13.08□□□□□ -0.32
TM9SF1-206ENST00000528669 SMCR5Q8TEV8 140 aa13.07□□□□□ -0.32
TM9SF1-206ENST00000528669 MALP21145 153 aa13.06□□□□□ -0.32
TM9SF1-206ENST00000528669 VWFP04275 2813 aa13.06□□□□□ -0.32
TM9SF1-206ENST00000528669 DEFB4AO15263 64 aa13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 ATP5G1P05496 136 aa13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 SS18Q15532 418 aa13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 OR13C6PQ8NH95 151 aa13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 KMT2BQ9UMN6 2715 aaPredicted RBP13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 FASNP49327 2511 aaKnown RBP13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 CCDC179H3BU77 68 aa13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 ACYP1P07311 99 aa13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 UNC79Q9P2D8 2635 aa13.05□□□□□ -0.32
TM9SF1-206ENST00000528669 B5MCH6 92 aa13.04□□□□□ -0.32
TM9SF1-206ENST00000528669 PRO0255Q9UI72 69 aa13.04□□□□□ -0.32
TM9SF1-206ENST00000528669 HELZ2Q9BYK8 2649 aaKnown RBP13.04□□□□□ -0.32
TM9SF1-206ENST00000528669 DNAL4O96015 105 aa13.03□□□□□ -0.32
TM9SF1-206ENST00000528669 TRBV7-7A0A0K0K1E9 115 aa13.02□□□□□ -0.32
TM9SF1-206ENST00000528669 A0A1B0GUV1 79 aa13.02□□□□□ -0.32
TM9SF1-206ENST00000528669 C9orf129Q5T035 196 aaKnown RBP13.02□□□□□ -0.33
TM9SF1-206ENST00000528669 Q8N3U1 123 aa13.02□□□□□ -0.33
TM9SF1-206ENST00000528669 GAGE2AQ6NT46 116 aa13.01□□□□□ -0.33
TM9SF1-206ENST00000528669 SS18L2Q9UHA2 77 aa13.01□□□□□ -0.33
TM9SF1-206ENST00000528669 LINC00269Q8N2A0 174 aa13□□□□□ -0.33
TM9SF1-206ENST00000528669 LECT2O14960 151 aa13□□□□□ -0.33
TM9SF1-206ENST00000528669 DEFB135Q30KP9 77 aa13□□□□□ -0.33
TM9SF1-206ENST00000528669 IGLV10-54A0A075B6I4 117 aa12.99□□□□□ -0.33
TM9SF1-206ENST00000528669 Q8IZM0 81 aa12.99□□□□□ -0.33
TM9SF1-206ENST00000528669 H0YGX0 51 aa12.99□□□□□ -0.33
TM9SF1-206ENST00000528669 INAFM2P0DMQ5 153 aa12.99□□□□□ -0.33
TM9SF1-206ENST00000528669 SMIM9A6NGZ8 99 aa12.98□□□□□ -0.33
TM9SF1-206ENST00000528669 PRR3P79522 188 aaKnown RBP12.98□□□□□ -0.33
TM9SF1-206ENST00000528669 SLPIP03973 132 aa12.98□□□□□ -0.33
TM9SF1-206ENST00000528669 LINC00643Q86TS7 51 aa12.97□□□□□ -0.33
TM9SF1-206ENST00000528669 C14orf132Q9NPU4 83 aa12.96□□□□□ -0.33
TM9SF1-206ENST00000528669 FAM236AA0A1B0GUQ0 79 aa12.96□□□□□ -0.34
TM9SF1-206ENST00000528669 FAM236BA0A1B0GV22 79 aa12.96□□□□□ -0.34
TM9SF1-206ENST00000528669 J3QKU1 62 aa12.96□□□□□ -0.34
TM9SF1-206ENST00000528669 ANGP03950 147 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-206ENST00000528669 LYRM9A8MSI8 78 aa12.94□□□□□ -0.34
TM9SF1-206ENST00000528669 CHCHD10Q8WYQ3 142 aaPredicted RBP12.94□□□□□ -0.34
TM9SF1-206ENST00000528669 LY6G6DO95868 133 aa12.94□□□□□ -0.34
TM9SF1-206ENST00000528669 SDIM1Q6ZPB5 146 aa12.94□□□□□ -0.34
TM9SF1-206ENST00000528669 KIAA0087Q14695 138 aa12.93□□□□□ -0.34
TM9SF1-206ENST00000528669 IGHV4-28A0A0C4DH34 117 aa12.93□□□□□ -0.34
TM9SF1-206ENST00000528669 C9orf116Q5BN46 136 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-206ENST00000528669 CD164L2Q6UWJ8 174 aa12.93□□□□□ -0.34
TM9SF1-206ENST00000528669 NCR3O14931 201 aa12.92□□□□□ -0.34
TM9SF1-206ENST00000528669 REG3AQ06141 175 aa12.92□□□□□ -0.34
TM9SF1-206ENST00000528669 C9orf66Q5T8R8 295 aa12.92□□□□□ -0.34
TM9SF1-206ENST00000528669 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
TM9SF1-206ENST00000528669 IMUPQ9GZP8 106 aa12.92□□□□□ -0.34
TM9SF1-206ENST00000528669 DAD1P61803 113 aa12.91□□□□□ -0.34
TM9SF1-206ENST00000528669 CELA1Q9UNI1 258 aa12.91□□□□□ -0.34
TM9SF1-206ENST00000528669 NOTCH2Q04721 2471 aa12.91□□□□□ -0.34
TM9SF1-206ENST00000528669 TENM1Q9UKZ4 2725 aa12.91□□□□□ -0.34
TM9SF1-206ENST00000528669 LINC01561Q8N1V8 128 aa12.9□□□□□ -0.34
TM9SF1-206ENST00000528669 NANOS2P60321 138 aaKnown RBP12.9□□□□□ -0.34
TM9SF1-206ENST00000528669 HTN3P15516 51 aa12.88□□□□□ -0.35
TM9SF1-206ENST00000528669 HECTD1Q9ULT8 2610 aa12.88□□□□□ -0.35
TM9SF1-206ENST00000528669 OBSCN-AS1Q96MR7 158 aa12.88□□□□□ -0.35
TM9SF1-206ENST00000528669 ORMDL1Q9P0S3 153 aa12.87□□□□□ -0.35
TM9SF1-206ENST00000528669 INAFM1C9JVW0 142 aa12.87□□□□□ -0.35
TM9SF1-206ENST00000528669 KLK5Q9Y337 293 aaPredicted RBP12.87□□□□□ -0.35
TM9SF1-206ENST00000528669 APOC4P55056 127 aa12.86□□□□□ -0.35
TM9SF1-206ENST00000528669 Q8NDZ9 215 aa12.86□□□□□ -0.35
TM9SF1-206ENST00000528669 TRRAPQ9Y4A5 3859 aa12.86□□□□□ -0.35
TM9SF1-206ENST00000528669 LINC00526Q96FQ7 95 aa12.86□□□□□ -0.35
TM9SF1-206ENST00000528669 OTOGQ6ZRI0 2925 aa12.85□□□□□ -0.35
TM9SF1-206ENST00000528669 C6orf223Q8N319 242 aa12.85□□□□□ -0.35
TM9SF1-206ENST00000528669 C3orf56Q8N813 242 aa12.85□□□□□ -0.35
TM9SF1-206ENST00000528669 CXCL5P42830 114 aa12.84□□□□□ -0.35
TM9SF1-206ENST00000528669 COX17Q14061 63 aa12.84□□□□□ -0.35
TM9SF1-206ENST00000528669 Q8NAQ8 132 aa12.84□□□□□ -0.35
TM9SF1-206ENST00000528669 LINC00846Q9NV44 126 aa12.84□□□□□ -0.35
TM9SF1-206ENST00000528669 NDUFC2O95298 119 aa12.83□□□□□ -0.36
TM9SF1-206ENST00000528669 C10orf25Q5T742 122 aa12.83□□□□□ -0.36
TM9SF1-206ENST00000528669 TMEM126AQ9H061 195 aa12.82□□□□□ -0.36
TM9SF1-206ENST00000528669 Q8N814 137 aa12.82□□□□□ -0.36
TM9SF1-206ENST00000528669 UNQ6190/PRO20217Q6UXQ8 127 aa12.81□□□□□ -0.36
TM9SF1-206ENST00000528669 IGKV3D-7A0A0C4DH55 119 aa12.81□□□□□ -0.36
TM9SF1-206ENST00000528669 ATRQ13535 2644 aa12.8□□□□□ -0.36
TM9SF1-206ENST00000528669 NSD1Q96L73 2696 aaPredicted RBP12.8□□□□□ -0.36
TM9SF1-206ENST00000528669 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
TM9SF1-206ENST00000528669 C6orf99Q4VX62 202 aa12.79□□□□□ -0.36
TM9SF1-206ENST00000528669 LINC00167Q96N53 147 aa12.79□□□□□ -0.36
TM9SF1-206ENST00000528669 KLK12Q9UKR0 248 aa12.79□□□□□ -0.36
TM9SF1-206ENST00000528669 MIFP14174 115 aa12.79□□□□□ -0.36
TM9SF1-206ENST00000528669 SPART-AS1P0CW21 52 aa12.78□□□□□ -0.36
TM9SF1-206ENST00000528669 S100A7L2Q5SY68 101 aa12.78□□□□□ -0.36
TM9SF1-206ENST00000528669 LELP1Q5T871 98 aa12.78□□□□□ -0.36
TM9SF1-206ENST00000528669 CYSRT1A8MQ03 144 aa12.76□□□□□ -0.37
TM9SF1-206ENST00000528669 A0A1B0GX51 115 aa12.76□□□□□ -0.37
TM9SF1-206ENST00000528669 HIVEP1P15822 2718 aa12.75□□□□□ -0.37
TM9SF1-206ENST00000528669 IGHV4-30-4P0DP06 118 aa12.75□□□□□ -0.37
TM9SF1-206ENST00000528669 TEP1Q99973 2627 aaKnown RBP12.74□□□□□ -0.37
TM9SF1-206ENST00000528669 CCKP06307 115 aa12.74□□□□□ -0.37
TM9SF1-206ENST00000528669 TMEM256-PLSCR3K7ERE1 68 aa12.73□□□□□ -0.37
TM9SF1-206ENST00000528669 ENHOQ6UWT2 76 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms