RNA–Protein interactions for RNA: ENST00000527409.1

LMNB2-204, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-204ENST00000527409 CKS1BP61024 79 aa14.01□□□□□ -0.17
LMNB2-204ENST00000527409 PMVKQ15126 192 aa14.01□□□□□ -0.17
LMNB2-204ENST00000527409 C6orf226Q5I0X4 101 aa14.01□□□□□ -0.17
LMNB2-204ENST00000527409 CST9LQ9H4G1 147 aa14.01□□□□□ -0.17
LMNB2-204ENST00000527409 LINC00469Q8N7U9 141 aa14□□□□□ -0.17
LMNB2-204ENST00000527409 NDUFC2-KCTD14E9PQ53 114 aa13.99□□□□□ -0.17
LMNB2-204ENST00000527409 URB1-AS1Q96HZ7 61 aa13.99□□□□□ -0.17
LMNB2-204ENST00000527409 YPEL4Q96NS1 127 aa13.99□□□□□ -0.17
LMNB2-204ENST00000527409 IGLV5-45A0A087WSX0 123 aa13.98□□□□□ -0.17
LMNB2-204ENST00000527409 RAB5BP61020 215 aa13.98□□□□□ -0.17
LMNB2-204ENST00000527409 GAGE2EQ4V326 116 aa13.98□□□□□ -0.17
LMNB2-204ENST00000527409 GAGE2DQ9UEU5 116 aa13.98□□□□□ -0.17
LMNB2-204ENST00000527409 A0A096LNJ9 63 aa13.97□□□□□ -0.17
LMNB2-204ENST00000527409 HBDP02042 147 aa13.97□□□□□ -0.17
LMNB2-204ENST00000527409 SMIM1B2RUZ4 78 aa13.96□□□□□ -0.17
LMNB2-204ENST00000527409 CXCL5P42830 114 aa13.96□□□□□ -0.17
LMNB2-204ENST00000527409 PDZD11Q5EBL8 140 aa13.95□□□□□ -0.18
LMNB2-204ENST00000527409 F8VRH5 84 aa13.94□□□□□ -0.18
LMNB2-204ENST00000527409 PHF5AQ7RTV0 110 aaKnown RBP13.94□□□□□ -0.18
LMNB2-204ENST00000527409 FAM168BA1KXE4 195 aa13.93□□□□□ -0.18
LMNB2-204ENST00000527409 SPINK6Q6UWN8 80 aa13.92□□□□□ -0.18
LMNB2-204ENST00000527409 H3BRM9 83 aa13.91□□□□□ -0.18
LMNB2-204ENST00000527409 ATP5LO75964 103 aa13.91□□□□□ -0.18
LMNB2-204ENST00000527409 PMCHL1Q16048 86 aa13.91□□□□□ -0.18
LMNB2-204ENST00000527409 FAM19A5Q7Z5A7 132 aaPredicted RBP13.91□□□□□ -0.18
LMNB2-204ENST00000527409 CBLN2Q8IUK8 224 aa13.91□□□□□ -0.18
LMNB2-204ENST00000527409 COX7B2Q8TF08 81 aa13.91□□□□□ -0.18
LMNB2-204ENST00000527409 PSORS1C2Q9UIG4 136 aa13.91□□□□□ -0.18
LMNB2-204ENST00000527409 IGLC3P0DOY3 106 aa13.9□□□□□ -0.18
LMNB2-204ENST00000527409 NDUFA6P56556 154 aa13.9□□□□□ -0.18
LMNB2-204ENST00000527409 SPINK8P0C7L1 97 aa13.89□□□□□ -0.19
LMNB2-204ENST00000527409 C9orf129Q5T035 196 aaKnown RBP13.89□□□□□ -0.19
LMNB2-204ENST00000527409 SRSF9Q13242 221 aaKnown RBP eCLIP13.88□□□□□ -0.19
LMNB2-204ENST00000527409 CHCHD1Q96BP2 118 aaKnown RBP13.88□□□□□ -0.19
LMNB2-204ENST00000527409 M0QXV9 152 aa13.87□□□□□ -0.19
LMNB2-204ENST00000527409 SLC7A5P1Q8MH63 180 aa13.87□□□□□ -0.19
LMNB2-204ENST00000527409 MT1HL1P0DM35 61 aa13.86□□□□□ -0.19
LMNB2-204ENST00000527409 SERTAD4-AS1Q5TG53 156 aa13.86□□□□□ -0.19
LMNB2-204ENST00000527409 KRTAP7-1Q8IUC3 87 aa13.86□□□□□ -0.19
LMNB2-204ENST00000527409 C1orf137Q5JT78 98 aa13.85□□□□□ -0.19
LMNB2-204ENST00000527409 REG3GQ6UW15 175 aa13.85□□□□□ -0.19
LMNB2-204ENST00000527409 ZNF22P17026 224 aaPredicted RBP13.83□□□□□ -0.2
LMNB2-204ENST00000527409 BAGE3Q86Y29 109 aa13.83□□□□□ -0.2
LMNB2-204ENST00000527409 LINC01600Q96MT4 127 aa13.83□□□□□ -0.2
LMNB2-204ENST00000527409 IGLV5-39A0A0G2JS06 123 aa13.82□□□□□ -0.2
LMNB2-204ENST00000527409 XAGE1AQ9HD64 81 aa13.82□□□□□ -0.2
LMNB2-204ENST00000527409 UBE2BP63146 152 aa13.81□□□□□ -0.2
LMNB2-204ENST00000527409 ODF1Q14990 250 aa13.8□□□□□ -0.2
LMNB2-204ENST00000527409 TRGC2P03986 189 aa13.79□□□□□ -0.2
LMNB2-204ENST00000527409 IGLV7-43P04211 117 aa13.79□□□□□ -0.2
LMNB2-204ENST00000527409 KRTAP11-1Q8IUC1 163 aa13.79□□□□□ -0.2
LMNB2-204ENST00000527409 C11orf86A6NJI1 115 aa13.78□□□□□ -0.2
LMNB2-204ENST00000527409 HSBP1O75506 76 aa13.78□□□□□ -0.2
LMNB2-204ENST00000527409 IFI27L1Q96BM0 104 aa13.78□□□□□ -0.2
LMNB2-204ENST00000527409 CHTOPQ9Y3Y2 248 aaKnown RBP13.78□□□□□ -0.2
LMNB2-204ENST00000527409 TRAV12-1A0A0B4J245 112 aa13.77□□□□□ -0.21
LMNB2-204ENST00000527409 TMEM170BQ5T4T1 132 aa13.77□□□□□ -0.21
LMNB2-204ENST00000527409 C22orf24Q9Y442 160 aa13.76□□□□□ -0.21
LMNB2-204ENST00000527409 TNXBP22105 4242 aa13.75□□□□□ -0.21
LMNB2-204ENST00000527409 LBHQ53QV2 105 aaPredicted RBP13.75□□□□□ -0.21
LMNB2-204ENST00000527409 TP73-AS1Q9UF72 201 aa13.75□□□□□ -0.21
LMNB2-204ENST00000527409 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
LMNB2-204ENST00000527409 DIRC1Q969H9 104 aa13.74□□□□□ -0.21
LMNB2-204ENST00000527409 FAM19A2Q8N3H0 131 aa13.73□□□□□ -0.21
LMNB2-204ENST00000527409 PLA2G2DQ9UNK4 145 aa13.73□□□□□ -0.21
LMNB2-204ENST00000527409 MRPL55Q7Z7F7 128 aaKnown RBP13.72□□□□□ -0.21
LMNB2-204ENST00000527409 HMCN2Q8NDA2 5059 aa13.71□□□□□ -0.21
LMNB2-204ENST00000527409 COLCA2A8K830 154 aa13.7□□□□□ -0.22
LMNB2-204ENST00000527409 COX17Q14061 63 aa13.7□□□□□ -0.22
LMNB2-204ENST00000527409 NUPR1O60356 82 aa13.69□□□□□ -0.22
LMNB2-204ENST00000527409 SERF1AO75920 110 aa13.69□□□□□ -0.22
LMNB2-204ENST00000527409 PFN2P35080 140 aa13.69□□□□□ -0.22
LMNB2-204ENST00000527409 ERG28Q9UKR5 140 aa13.69□□□□□ -0.22
LMNB2-204ENST00000527409 TMEM223A0PJW6 202 aa13.68□□□□□ -0.22
LMNB2-204ENST00000527409 H0Y9J4 135 aa13.68□□□□□ -0.22
LMNB2-204ENST00000527409 KRTAP10-8P60410 259 aa13.68□□□□□ -0.22
LMNB2-204ENST00000527409 IGLV5-37A0A075B6J1 123 aa13.67□□□□□ -0.22
LMNB2-204ENST00000527409 LEPROTL1O95214 131 aa13.67□□□□□ -0.22
LMNB2-204ENST00000527409 LINC00310P59036 64 aa13.67□□□□□ -0.22
LMNB2-204ENST00000527409 ZNF625Q96I27 306 aaPredicted RBP13.66□□□□□ -0.22
LMNB2-204ENST00000527409 NKAPP1Q8N9T2 125 aa13.65□□□□□ -0.22
LMNB2-204ENST00000527409 LINC00167Q96N53 147 aa13.64□□□□□ -0.23
LMNB2-204ENST00000527409 SND1-IT1Q9HBX3 110 aa13.63□□□□□ -0.23
LMNB2-204ENST00000527409 HSPB8Q9UJY1 196 aa13.62□□□□□ -0.23
LMNB2-204ENST00000527409 H0Y8G0 127 aa13.61□□□□□ -0.23
LMNB2-204ENST00000527409 ZNF861PO60384 105 aa13.61□□□□□ -0.23
LMNB2-204ENST00000527409 GAGE10A6NGK3 116 aa13.59□□□□□ -0.23
LMNB2-204ENST00000527409 RPL37AP8A6NKH3 93 aa13.59□□□□□ -0.23
LMNB2-204ENST00000527409 BCE1O60756 84 aa13.58□□□□□ -0.24
LMNB2-204ENST00000527409 PLNP26678 52 aa13.58□□□□□ -0.24
LMNB2-204ENST00000527409 RPL24P83731 157 aaKnown RBP13.58□□□□□ -0.24
LMNB2-204ENST00000527409 VPREB1P12018 145 aa13.57□□□□□ -0.24
LMNB2-204ENST00000527409 FABP4P15090 132 aa13.57□□□□□ -0.24
LMNB2-204ENST00000527409 RPL28P46779 137 aaKnown RBP13.56□□□□□ -0.24
LMNB2-204ENST00000527409 LINC00158P58513 81 aa13.56□□□□□ -0.24
LMNB2-204ENST00000527409 SCO1O75880 301 aa13.55□□□□□ -0.24
LMNB2-204ENST00000527409 KRTAP1-4P0C5Y4 121 aa13.55□□□□□ -0.24
LMNB2-204ENST00000527409 HERV-K104P63124 156 aa13.55□□□□□ -0.24
LMNB2-204ENST00000527409 IGLV1-50A0A075B6I6 118 aa13.54□□□□□ -0.24
LMNB2-204ENST00000527409 PRR26Q8N8Z3 221 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms