RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 INAFM2P0DMQ5 153 aa9.22□□□□□ -0.93
CAPN1-202ENST00000524773 CXCL5P42830 114 aa9.22□□□□□ -0.93
CAPN1-202ENST00000524773 C4orf3Q8WVX3 66 aa9.22□□□□□ -0.93
CAPN1-202ENST00000524773 VWFP04275 2813 aa9.22□□□□□ -0.93
CAPN1-202ENST00000524773 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
CAPN1-202ENST00000524773 LINC00526Q96FQ7 95 aa9.22□□□□□ -0.93
CAPN1-202ENST00000524773 DEFB130BP0DP73 79 aa9.21□□□□□ -0.93
CAPN1-202ENST00000524773 DEFB130AP0DP74 79 aa9.21□□□□□ -0.93
CAPN1-202ENST00000524773 CSDC2Q9Y534 153 aaKnown RBP9.21□□□□□ -0.93
CAPN1-202ENST00000524773 COX7CP15954 63 aa9.21□□□□□ -0.94
CAPN1-202ENST00000524773 IL17DQ8TAD2 202 aa9.21□□□□□ -0.94
CAPN1-202ENST00000524773 FSHBP01225 129 aa9.21□□□□□ -0.94
CAPN1-202ENST00000524773 ITPR2Q14571 2701 aa9.2□□□□□ -0.94
CAPN1-202ENST00000524773 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
CAPN1-202ENST00000524773 FAM222AQ5U5X8 452 aa9.2□□□□□ -0.94
CAPN1-202ENST00000524773 FAM19A3Q7Z5A8 133 aa9.2□□□□□ -0.94
CAPN1-202ENST00000524773 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
CAPN1-202ENST00000524773 TRBV10-1A0A0K0K1A3 114 aa9.19□□□□□ -0.94
CAPN1-202ENST00000524773 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
CAPN1-202ENST00000524773 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
CAPN1-202ENST00000524773 Q8N3U1 123 aa9.19□□□□□ -0.94
CAPN1-202ENST00000524773 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
CAPN1-202ENST00000524773 KRTAP1-3Q8IUG1 177 aa9.18□□□□□ -0.94
CAPN1-202ENST00000524773 ESM1Q9NQ30 184 aa9.18□□□□□ -0.94
CAPN1-202ENST00000524773 IGLV10-54A0A075B6I4 117 aa9.18□□□□□ -0.94
CAPN1-202ENST00000524773 SS18Q15532 418 aa9.18□□□□□ -0.94
CAPN1-202ENST00000524773 CCL24O00175 119 aa9.17□□□□□ -0.94
CAPN1-202ENST00000524773 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
CAPN1-202ENST00000524773 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-202ENST00000524773 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
CAPN1-202ENST00000524773 TRBV6-8A0A0A6YYG3 113 aa9.16□□□□□ -0.94
CAPN1-202ENST00000524773 WFDC11Q8NEX6 87 aa9.16□□□□□ -0.94
CAPN1-202ENST00000524773 RPL18AQ02543 176 aaKnown RBP9.16□□□□□ -0.94
CAPN1-202ENST00000524773 FASNP49327 2511 aaKnown RBP9.15□□□□□ -0.94
CAPN1-202ENST00000524773 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
CAPN1-202ENST00000524773 TRAV25A0A0B4J276 109 aa9.15□□□□□ -0.94
CAPN1-202ENST00000524773 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
CAPN1-202ENST00000524773 LINC00959A0A1B0GUT2 108 aa9.14□□□□□ -0.95
CAPN1-202ENST00000524773 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
CAPN1-202ENST00000524773 HIVEP2P31629 2446 aa9.14□□□□□ -0.95
CAPN1-202ENST00000524773 ATOX1O00244 68 aa9.14□□□□□ -0.95
CAPN1-202ENST00000524773 FHL2Q14192 279 aa9.14□□□□□ -0.95
CAPN1-202ENST00000524773 NOTCH2Q04721 2471 aa9.13□□□□□ -0.95
CAPN1-202ENST00000524773 SPATA3Q8NHX4 192 aa9.13□□□□□ -0.95
CAPN1-202ENST00000524773 A0A087WZ39 114 aa9.13□□□□□ -0.95
CAPN1-202ENST00000524773 DEFB4AO15263 64 aa9.13□□□□□ -0.95
CAPN1-202ENST00000524773 Q8NDZ9 215 aa9.13□□□□□ -0.95
CAPN1-202ENST00000524773 HECTD1Q9ULT8 2610 aa9.13□□□□□ -0.95
CAPN1-202ENST00000524773 TRBV6-4A0A1B0GX49 114 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 OXTP01178 125 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 PDZD2O15018 2839 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 IBA57-AS1B1ANH7 110 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 ORMDL1Q9P0S3 153 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 H0YGX0 51 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 CRYGAP11844 174 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 NANOS2P60321 138 aaKnown RBP9.12□□□□□ -0.95
CAPN1-202ENST00000524773 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
CAPN1-202ENST00000524773 GYPEP15421 78 aa9.11□□□□□ -0.95
CAPN1-202ENST00000524773 DNAJC9-AS1A6NH13 148 aa9.1□□□□□ -0.95
CAPN1-202ENST00000524773 M0R2N4 97 aa9.1□□□□□ -0.95
CAPN1-202ENST00000524773 OBSCN-AS1Q96MR7 158 aa9.1□□□□□ -0.95
CAPN1-202ENST00000524773 Q6JHZ5 121 aa9.1□□□□□ -0.95
CAPN1-202ENST00000524773 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
CAPN1-202ENST00000524773 C16orf74Q96GX8 76 aa9.1□□□□□ -0.95
CAPN1-202ENST00000524773 J3KT08 172 aa9.09□□□□□ -0.95
CAPN1-202ENST00000524773 CMC4P56277 68 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-202ENST00000524773 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
CAPN1-202ENST00000524773 SERP2Q8N6R1 65 aa9.09□□□□□ -0.95
CAPN1-202ENST00000524773 UPK3BQ9BT76 320 aa9.08□□□□□ -0.96
CAPN1-202ENST00000524773 CCKP06307 115 aa9.07□□□□□ -0.96
CAPN1-202ENST00000524773 C6orf99Q4VX62 202 aa9.07□□□□□ -0.96
CAPN1-202ENST00000524773 CSNK1G2-AS1Q8NCQ2 148 aa9.07□□□□□ -0.96
CAPN1-202ENST00000524773 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
CAPN1-202ENST00000524773 C6orf223Q8N319 242 aa9.07□□□□□ -0.96
CAPN1-202ENST00000524773 Q8N814 137 aa9.07□□□□□ -0.96
CAPN1-202ENST00000524773 GHRHP01286 108 aa9.06□□□□□ -0.96
CAPN1-202ENST00000524773 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
CAPN1-202ENST00000524773 C19orf73Q9NVV2 129 aa9.06□□□□□ -0.96
CAPN1-202ENST00000524773 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
CAPN1-202ENST00000524773 C4orf26Q17RF5 130 aa9.05□□□□□ -0.96
CAPN1-202ENST00000524773 C10orf25Q5T742 122 aa9.04□□□□□ -0.96
CAPN1-202ENST00000524773 C20orf197Q8N268 126 aa9.04□□□□□ -0.96
CAPN1-202ENST00000524773 LY6G6DO95868 133 aa9.03□□□□□ -0.96
CAPN1-202ENST00000524773 TRRAPQ9Y4A5 3859 aa9.03□□□□□ -0.96
CAPN1-202ENST00000524773 PKD1L1Q8TDX9 2849 aa9.02□□□□□ -0.96
CAPN1-202ENST00000524773 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
CAPN1-202ENST00000524773 TENM1Q9UKZ4 2725 aa9.02□□□□□ -0.97
CAPN1-202ENST00000524773 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
CAPN1-202ENST00000524773 LINC00482Q8N8I6 264 aa9.02□□□□□ -0.97
CAPN1-202ENST00000524773 KRTAP1-1Q07627 177 aa9.01□□□□□ -0.97
CAPN1-202ENST00000524773 LINC01006Q8NI28 216 aa9.01□□□□□ -0.97
CAPN1-202ENST00000524773 ANK3Q12955 4377 aaKnown RBP9.01□□□□□ -0.97
CAPN1-202ENST00000524773 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
CAPN1-202ENST00000524773 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
CAPN1-202ENST00000524773 HAMPP81172 84 aa9□□□□□ -0.97
CAPN1-202ENST00000524773 UNQ6190/PRO20217Q6UXQ8 127 aa9□□□□□ -0.97
CAPN1-202ENST00000524773 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
CAPN1-202ENST00000524773 KIAA0087Q14695 138 aa9□□□□□ -0.97
CAPN1-202ENST00000524773 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
CAPN1-202ENST00000524773 Q8IZM0 81 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 316 ms