RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TMSB15BA0A087X1C1 80 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 LINC01549A6NIU2 74 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 F5H768 121 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 H3BPC8 53 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 K7EMI3 77 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 SPINK4O60575 86 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 IGLV1-51P01701 117 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 IGLC6P0CF74 106 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 SMIM6P0DI80 62 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 SMIM17P0DL12 118 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 GZMBP10144 247 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 G0S2P27469 103 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 SRIP30626 198 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 CKS2P33552 79 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 ZNF80P51504 273 aaPredicted RBP1.64□□□□□ -2.15
SKP1-212ENST00000523966 DEFB131AP59861 70 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 DEFB125Q8N687 156 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 PTH2Q96A98 100 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 CHCHD1Q96BP2 118 aaKnown RBP1.64□□□□□ -2.15
SKP1-212ENST00000523966 AP1S3Q96PC3 154 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 LINC00467Q9BRT7 94 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 NXT2Q9NPJ8 142 aaKnown RBP1.64□□□□□ -2.15
SKP1-212ENST00000523966 VPS13CQ709C8 3753 aa1.64□□□□□ -2.15
SKP1-212ENST00000523966 CSMD1Q96PZ7 3565 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 ZNF469Q96JG9 3925 aaPredicted RBP1.63□□□□□ -2.15
SKP1-212ENST00000523966 TRAV12-3A0A0B4J271 114 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 H3BVH4 76 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 M0R2P5 195 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 M0R2Z0 102 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 ZNF705DP0CH99 300 aaPredicted RBP1.63□□□□□ -2.15
SKP1-212ENST00000523966 ZNF705BP0CI00 300 aaPredicted RBP1.63□□□□□ -2.15
SKP1-212ENST00000523966 FABP4P15090 132 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 LINC00313P59037 77 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 S100A12P80511 92 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 GDF5OSQ5U4N7 250 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 HIST3H2BBQ8N257 126 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 C3orf56Q8N813 242 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 WFDC9Q8NEX5 89 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 C18orf32Q8TCD1 76 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 PRELID3AQ96N28 172 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 HIST1H2BLQ99880 126 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 C20orf78Q9BR46 151 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 MAP1LC3AQ9H492 121 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 DPH3P1Q9H4G8 78 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 HSPB8Q9UJY1 196 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 TP53TG1Q9Y2A0 90 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 STAB1Q9NY15 2570 aa1.63□□□□□ -2.15
SKP1-212ENST00000523966 TRAV12-2A0A075B6T6 113 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 C20orf202A1L168 122 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 SMIM9A6NGZ8 99 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 A8MWV9 139 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 TMEM238C9JI98 176 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 D6R8Y8 96 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 M0R381 172 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 GNRH2O43555 120 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 ATP5G1P05496 136 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 RNASE3P12724 160 aaKnown RBP1.62□□□□□ -2.15
SKP1-212ENST00000523966 EVI2AP22794 236 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 JOSD1Q15040 202 aaPredicted RBP1.62□□□□□ -2.15
SKP1-212ENST00000523966 PMCHL1Q16048 86 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 C4orf26Q17RF5 130 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 IQCJQ1A5X6 159 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 LGALS9BQ3B8N2 356 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 OR10AG1Q8NH19 301 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 TMEM263Q8WUH6 116 aaKnown RBP1.62□□□□□ -2.15
SKP1-212ENST00000523966 TIMM8BQ9Y5J9 83 aaPredicted RBP1.62□□□□□ -2.15
SKP1-212ENST00000523966 MGAM2Q2M2H8 2515 aa1.62□□□□□ -2.15
SKP1-212ENST00000523966 MUC21A0A0G2JKD1 596 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 TRBV10-1A0A0K0K1A3 114 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 MUC21A0A140T8X8 626 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 TINCRA0A1B0GVN0 87 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 LINC01546A6NGU7 62 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 TSTD3H0UI37 97 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 LEPROTL1O95214 131 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 HBDP02042 147 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 PRB4P10163 310 aaPredicted RBP1.61□□□□□ -2.15
SKP1-212ENST00000523966 HTN1P15515 57 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 FCER1GP30273 86 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 IFI27P40305 119 aaPredicted RBP1.61□□□□□ -2.15
SKP1-212ENST00000523966 DEFB1P60022 68 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 KRTDAPP60985 99 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 RHOHQ15669 191 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 RRN3P1Q2M238 152 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 LGALS9CQ6DKI2 356 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 ZNF705AQ6ZN79 300 aaPredicted RBP1.61□□□□□ -2.15
SKP1-212ENST00000523966 FAM19A5Q7Z5A7 132 aaPredicted RBP1.61□□□□□ -2.15
SKP1-212ENST00000523966 SPATA12Q7Z6I5 190 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 Q8N8P6 123 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 OR11H2Q8NH07 326 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 C12orf57Q99622 126 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 TMEM70Q9BUB7 260 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 SMIM2Q9BVW6 85 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 ST20Q9HBF5 79 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 NIT2Q9NQR4 276 aa1.61□□□□□ -2.15
SKP1-212ENST00000523966 NOTCH1P46531 2555 aa1.6□□□□□ -2.15
SKP1-212ENST00000523966 TRGV2A0A075B6R0 118 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms