RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TAF9BQ9HBM6 251 aa1.39□□□□□ -2.19
HMGB1P1-201ENST00000522557 NIT2Q9NQR4 276 aa1.39□□□□□ -2.19
HMGB1P1-201ENST00000522557 GNG8Q9UK08 70 aa1.39□□□□□ -2.19
HMGB1P1-201ENST00000522557 EPPK1P58107 5090 aaKnown RBP1.39□□□□□ -2.19
HMGB1P1-201ENST00000522557 DYNC2H1Q8NCM8 4307 aaKnown RBP1.39□□□□□ -2.19
HMGB1P1-201ENST00000522557 RYR2Q92736 4967 aa1.39□□□□□ -2.19
HMGB1P1-201ENST00000522557 DEFB131BA0A096LNP1 70 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 TRBV7-1A0A0A6YYK4 115 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 GEMIN2O14893 280 aaKnown RBP1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 DLEU1O43261 78 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 GNG7O60262 68 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 TCRAP04437 139 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 APELAP0DMC3 54 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 HIST1H1BP16401 226 aaKnown RBP1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 ZNF93P35789 620 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 RPS25P62851 125 aaKnown RBP1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 PPP3R1P63098 170 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 MPV17LQ2QL34 196 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 RPL39P5Q59GN2 51 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 C1orf137Q5JT78 98 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 KRTAP26-1Q6PEX3 210 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 TMEM14EPQ6UXP3 125 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 ZNF833PQ6ZTB9 187 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 TTC9CQ8N5M4 171 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 OR5AK2Q8NH90 309 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 SFT2D1Q8WV19 159 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 LINC00467Q9BRT7 94 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 ERG28Q9UKR5 140 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 DNAH1Q9P2D7 4330 aa1.38□□□□□ -2.19
HMGB1P1-201ENST00000522557 IGKV3-7A0A075B6H7 116 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 TRAV14DV4A0A0A6YYC5 116 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 OR2T8A6NH00 312 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 PRH1P02810 166 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 SPART-AS1P0CW21 52 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 SAA2P0DJI9 122 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 TPT1P13693 172 aaKnown RBP1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 FOXA3P55318 350 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 LSM3P62310 102 aaKnown RBP1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 GLIPR1L1Q6UWM5 242 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 DEFB107AQ8IZN7 70 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 ACBD7Q8N6N7 88 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 OR2T35Q8NGX2 323 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 OR10AC1Q8NH08 325 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 C2orf88Q9BSF0 95 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 LY96Q9Y6Y9 160 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 RYR1P21817 5038 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 HYDINQ4G0P3 5121 aa1.37□□□□□ -2.19
HMGB1P1-201ENST00000522557 SRRM2Q9UQ35 2752 aaKnown RBP1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 HERC2O95714 4834 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 UQCRQO14949 82 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 LYRM1O43325 122 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 SLC25A5P05141 298 aaKnown RBP1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 IGLC6P0CF74 106 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 LINC00694P0DN24 101 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 FABP4P15090 132 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 HTN3P15516 51 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 CCL18P55774 89 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 DEFB131AP59861 70 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 MRPS36P82909 103 aaKnown RBP1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 DEFA5Q01523 94 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 Q56UQ5 140 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 TMEM203Q969S6 136 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 RHPN1-AS1Q9BWJ2 59 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 C14orf132Q9NPU4 83 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 TMEM14BQ9NUH8 114 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 FKBP11Q9NYL4 201 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 RABAC1Q9UI14 185 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 TPRKBQ9Y3C4 175 aa1.36□□□□□ -2.19
HMGB1P1-201ENST00000522557 DNAH3Q8TD57 4116 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 NBDYA0A0U1RRE5 68 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 FAM236AA0A1B0GUQ0 79 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 FAM236BA0A1B0GV22 79 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 C17orf112F2Z3M2 114 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 M0R129 80 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 NDUFA4O00483 81 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 HBDP02042 147 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 AKR1D1P51857 326 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 SNRPD3P62318 126 aaKnown RBP1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 HMGN3Q15651 99 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 C12orf73Q69YU5 71 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 IDO2Q6ZQW0 420 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 C6orf201Q7Z4U5 140 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 VSTM2AQ8TAG5 236 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 TMEM254Q8TBM7 123 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 CLEC2BQ92478 149 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 DIRC1Q969H9 104 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 COMMD3Q9UBI1 195 aa1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 HUWE1Q7Z6Z7 4374 aaKnown RBP1.35□□□□□ -2.19
HMGB1P1-201ENST00000522557 PCLOQ9Y6V0 5065 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 SACSQ9NZJ4 4579 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 IGKV2D-26A0A0A0MRZ7 120 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 TRAV2A0A0B4J234 112 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 hDV103S1A0JD37 113 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 SNAPC5O75971 98 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 SMR3BP02814 79 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 TRAPPC2P0DI81 140 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 TRAPPC2BP0DI82 140 aa1.34□□□□□ -2.19
HMGB1P1-201ENST00000522557 SAA1P0DJI8 122 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms